; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G009240 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G009240
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCmo_Chr05:7229652..7231139
RNA-Seq ExpressionCmoCh05G009240
SyntenyCmoCh05G009240
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0034220 - ion transmembrane transport (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0008381 - mechanosensitive ion channel activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0004491 - methylmalonate-semialdehyde dehydrogenase (acylating) activity (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7968649.1 hypothetical protein I3843_08G165400 [Carya illinoinensis]7.8e-18966.19Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM SL  N TW LT+LP GK+AL NKWV++IK E +G +R+KAR+VVKG+ Q++G+DY +IFSPVVKL TIR++L+IVA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DL+E+IYM QP+GF+  GKE++VCKL KSLYGLKQAPRQ ++KFD+FM  +GF R + D CCY+K + +SY+ LLLYVDD+L+AGSS+ EIN LK  LS 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         FEMKDLGAAKQILGMRI RDRS  TL LSQE+Y++KVL +F M+ AKP +TPLA+H +L+K QSPKT EE+E M  +PYASA+GSLMY MVCTRPDI  
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVG VS+YM+NPGK+HWEAVKW+LRYL  +S+T+LC+    + LQG+VDADL+ DVDSRKST+G++YT+ GT VSW  KLQK VALS TEAEYVAI EAG
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLC
        KEM+W+  +LEELG+K  K ILH+DSQS I L KNP +HSRTKHI+ RYHF R L++ G + LEKI GA+NP DM TK V   KL+LC
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLC

KYP31774.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan]9.0e-18565.78Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM+SL++N TW LTELP GK AL NKWV+++K E DGR+R+KARLVVKG+ Q+ GID+ EIFSPVVK+ TIR++LSIVA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DLDE+IYM QPEGF   GKE++VCKL+KSLYGLKQAPRQ +KKF+ FM  SGF R + D CCY+KKY +SY+ L LYVDD+LIAG +M EIN LK  L+ 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         FEMKDLG AKQILGMRISR+R  G L LSQE+YIEK+L +F + +AK R TPL  H+KLSK QSP+TVEE++HM+ VPYASAVGSLMY MVCTRPDI H
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVGVVS++++NPGK+HWE VKW+LRYL  TS   L +  G   LQGF DADL  D+D+RKST+GYI+T+  T VSW  KLQ  VALS TEAEY+AI+EA 
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLC
        KEMIW+ ++L ELG++Q    L +DSQS I L KNPV+HSR KHI+ RYHF R L+ + ++ L KI G++NP DMLTK V   KLRLC
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLC

KYP68607.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]9.0e-18565.78Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM+SL++N TW LTELP GK AL NKWV+++K E DGR+R+KARLVVKG+ Q+ GID+ EIFSPVVK+ TIR++LSIVA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DLDE+IYM QPEGF   GKE++VCKL+KSLYGLKQAPRQ +KKF+ FM  SGF R + D CCY+KKY +SY+ L LYVDD+LIAG +M EIN LK  L+ 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         FEMKDLG AKQILGMRISR+R  G L LSQE+YIEK+L +F + +AK R TPL  H+KLSK QSP+TVEE++HM+ VPYASAVGSLMY MVCTRPDI H
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVGVVS++++NPGK+HWE VKW+LRYL  TS   L +  G   LQGF DADL  D+D+RKST+GYI+T+  T VSW  KLQ  VALS TEAEY+AI+EA 
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLC
        KEMIW+ ++L ELG++Q    L +DSQS I L KNPV+HSR KHI+ RYHF R L+ + ++ L KI G++NP DMLTK V   KLRLC
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLC

RVX13198.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.4e-18565.11Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM SL  N TW LTELP GK+AL NKWV++IK E DG +R+KARLVVKG+ Q++GIDY EIFSPVVK+ TIR++L +VA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DL+E++YM QPEGF   G+E++VCKL KSLYGLKQAPRQ +KKFD+FM + GF R E D CCY K + +SY+ LLLYVDD+LIAGS + +IN+LK  LS 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         F MKDLGAAKQILGMRI RD++ GTL LSQ +Y++KVLS+F MN AKP +TPL +H KLSK QSPKT EER+HM+ VPYASA+GSLMY MVCTRPDITH
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVGVVS++M+ PGK+HWEAVKW+LRYL  + +T LC+    + LQG+VDAD + D+DSRKST+G+++T+ GT +SW   LQK V LS TEAEYVA  EAG
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALID
        KEMIW+  +L+ELG+KQ   ILH+DSQS I L KN  +HS++KHI+ +YHF R LVE+  + LEKI G+KNP DMLTK V + KL+LC A I+
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALID

RZC29599.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]1.4e-18564.98Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM+SL++N TW LT+LP GK+AL N+WV+++K E DGRRR+KARLVVKG+ Q++GID+ EIFSPVVK+ TIR++LSIVA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DL+E+IYM QP+GF  PGKE++VCKL+KSLYGLKQAPRQ +KKF+ FMS SGF R + D CCY+KKYT+SYV L++YVDD+LIAGSSM EIN LK  L+ 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         FEMKDLG AKQILGMRI R+RS G L LSQE+YI K+L +F + ++K R TPL +H+K SK QS +T EE+ +M+ VPYASAVGSLMY MVCTRPDI H
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVGVVS++ +NP KEHWE VKW+LRYL  TS   LC+  G + LQGF DADL  D D++KST+GYI+T+ GT VSW  KLQ  VALS TEAEY+AI+EA 
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDM
        KEMIW+ ++L ELG++Q    + +DSQS I L KNPV+HSR KHI+ RYHF R L+ +GD+ L KI G++NP DMLTK V  GKLRLC A + +
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDM

TrEMBL top hitse value%identityAlignment
A0A2N9FNY4 Uncharacterized protein5.0e-18965.05Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM+SL  + TW LTELP  K+AL NKWV+++K E DG +R+KARLVVKG+ Q++G+DY +IFSPVVKL TIR++L IVA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DL+E+IYM QP+GF   GKE++VCKL KSLYGLKQAPRQ +KKFDSFM  +GF R + D CCY+K + +SY+ LLLYVDD+LIAGSS+ EIN+LK  LS 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         F MKDLG AKQILGMRI RDR+ GTL LSQ +Y++K+LS+F M+ AKP +TPL +H +L+K QSPKT +E+ +M+ VPYASA+GSLMY MVCTRPDI H
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVGVVS+YM+NPGK+HWEAVKW+LRYL  T  T+LC+    + L G+VD+DL+ DVD+RKST+GY+YT+ GT VSW+ +LQK VALS TEAEYVA+ EAG
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDMV
        KEM+W+  +LEELGQ+Q K ILH+DSQS I L KNP +HSRTKHI+ RYHF R L++ G + LEKI GAKNP DMLTK V + KL+LC   + ++
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDMV

A0A2N9GHK9 Uncharacterized protein5.0e-18965.05Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM+SL  + TW LTELP  K+AL NKWV+++K E DG +R+KARLVVKG+ Q++G+DY +IFSPVVKL TIR++L IVA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DL+E+IYM QP+GF   GKE++VCKL KSLYGLKQAPRQ +KKFDSFM  +GF R + D CCY+K + +SY+ LLLYVDD+LIAGSS+ EIN+LK  LS 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         F MKDLG AKQILGMRI RDR+ GTL LSQ +Y++K+LS+F M+ AKP +TPL +H +L+K QSPKT +E+ +M+ VPYASA+GSLMY MVCTRPDI H
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVGVVS+YM+NPGK+HWEAVKW+LRYL  T  T+LC+    + L G+VD+DL+ DVD+RKST+GY+YT+ GT VSW+ +LQK VALS TEAEYVA+ EAG
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDMV
        KEM+W+  +LEELGQ+Q K ILH+DSQS I L KNP +HSRTKHI+ RYHF R L++ G + LEKI GAKNP DMLTK V + KL+LC   + ++
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDMV

A0A2N9HTG0 Uncharacterized protein1.1e-18865.05Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM+SL  + TW LTELP  K+AL NKWV+++K E DG +R+KARLVVKG+ Q++G+DY +IFSPVVKL TIR++L IVA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DL+E+IYM QP+GF   GKE++VCKL KSLYGLKQAPRQ +KKFDSFM  +GF R + D CCY+K + +SY+ LLLYVDD+LIAGSS+ EIN+LK  LS 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         F MKDLG AKQILGMRI RDR+ GTL LSQ +Y++K+LS+F M+ AKP +TPL +H +L+K QSPKT +E+ +M+ VPYASA+GSLMY MVCTRPDI H
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVGVVS+YM+NPGK+HWEAVKW+LRYL  T  T+LC+    + L G+VD+DL+ DVD+RKST+GY+YT+ GT VSW+ +LQK VALS TEAEYVA+ EAG
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDMV
        KEM+W+  +LEELGQ+Q K ILH+DSQS I L KNP +HSRTKHI+ RYHF R L++ G + LEKI GAKNP DMLTK V + KL+LC   + ++
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDMV

A0A2N9I1L5 Uncharacterized protein5.0e-18965.05Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM+SL  + TW LTELP  K+AL NKWV+++K E DG +R+KARLVVKG+ Q++G+DY +IFSPVVKL TIR++L IVA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DL+E+IYM QP+GF   GKE++VCKL KSLYGLKQAPRQ +KKFDSFM  +GF R + D CCY+K + +SY+ LLLYVDD+LIAGSS+ EIN+LK  LS 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         F MKDLG AKQILGMRI RDR+ GTL LSQ +Y++K+LS+F M+ AKP +TPL +H +L+K QSPKT +E+ +M+ VPYASA+GSLMY MVCTRPDI H
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVGVVS+YM+NPGK+HWEAVKW+LRYL  T  T+LC+    + L G+VD+DL+ DVD+RKST+GY+YT+ GT VSW+ +LQK VALS TEAEYVA+ EAG
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDMV
        KEM+W+  +LEELGQ+Q K ILH+DSQS I L KNP +HSRTKHI+ RYHF R L++ G + LEKI GAKNP DMLTK V + KL+LC   + ++
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDMV

A0A5B7BAK4 Uncharacterized protein2.9e-18964.57Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG
        M DEM SL  N TW LTELP GK+AL NKWV++IK E DG +R+KARLVVKG+ Q++G+DY EIFSPVVK+ TIR++L IVA ENLHLEQ+DVKT FLHG
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHG

Query:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS
        DL+E+IYM+QP+GF APGKE ++CKL KSLYGLKQAPRQ +KKFD FM  +GF R + D CCY+K++ + Y+ LLLYVDD+LIAGSS++EI +LK  LS 
Subjt:  DLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSS

Query:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH
         F MKDLGAAKQILGMRISRDR+AGTL LSQ +Y+++V+S+F M +AKP +TPLA+H +L+K QSPKT EE+ +M  VPYASAVGSLMY MVCTRPDI H
Subjt:  VFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITH

Query:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG
        AVGVVS++M+NPGK+HWEA+KW+LRYL  T++T LC+    +VLQG+VD+DL+ DVD+RKST+GY++T+ GT VSW+ +LQK VALS TEAEYVA+ EA 
Subjt:  AVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAG

Query:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDM
        KEM+W+  +LEELG+K    +L++DSQS I L KN  +HSRTKHI+ RYHF R L+++  + LEKI G++NP DMLTK V + KL+LC A + +
Subjt:  KEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDM

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.1e-8738.27Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRR-RFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLH
        ++ E+++ + NNTW +T+ P  K  + ++WVF +K    G   R+KARLV +G++Q+  IDY E F+PV ++ + R +LS+V   NL + QMDVKT FL+
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRR-RFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLH

Query:  GDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYL--KKYTDSYVFLLLYVDDILIAGSSMREINHLKAI
        G L EEIYM+ P+G +       VCKLNK++YGLKQA R  F+ F+  + +  F  S  D+C Y+  K   +  +++LLYVDD++IA   M  +N+ K  
Subjt:  GDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYL--KKYTDSYVFLLLYVDDILIAGSSMREINHLKAI

Query:  LSSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPD
        L   F M DL   K  +G+RI  +     + LSQ  Y++K+LSKF M N    +TPL + I      S       +   + P  S +G LMY M+CTRPD
Subjt:  LSSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPD

Query:  ITHAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVV---LQGFVDADLSEDVDSRKSTSGYIYTI-DGTVVSWMFKLQKCVALSYTEAEY
        +T AV ++S+Y +    E W+ +K +LRYL  T +  L +         + G+VD+D +     RKST+GY++ + D  ++ W  K Q  VA S TEAEY
Subjt:  ITHAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVV---LQGFVDADLSEDVDSRKSTSGYIYTI-DGTVVSWMFKLQKCVALSYTEAEY

Query:  VAIAEAGKEMIWMTDYLEELGQKQCKKI-LHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTK
        +A+ EA +E +W+   L  +  K    I ++ D+Q  I +  NP  H R KHI  +YHF R  V+   +CLE I       D+ TK
Subjt:  VAIAEAGKEMIWMTDYLEELGQKQCKKI-LHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.3e-16658.47Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRR-RFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLH
        M +EM SL++N T+ L ELP GKR L  KWVFK+K + D +  R+KARLVVKG+ Q+KGID+ EIFSPVVK+ +IR +LS+ A  +L +EQ+DVKT FLH
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRR-RFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLH

Query:  GDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTD-SYVFLLLYVDDILIAGSSMREINHLKAIL
        GDL+EEIYM+QPEGF   GK+HMVCKLNKSLYGLKQAPRQ + KFDSFM    + ++  D C Y K++++ +++ LLLYVDD+LI G     I  LK  L
Subjt:  GDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTD-SYVFLLLYVDDILIAGSSMREINHLKAIL

Query:  SSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDI
        S  F+MKDLG A+QILGM+I R+R++  L LSQE+YIE+VL +F M NAKP +TPLA H+KLSK   P TVEE+ +MA VPY+SAVGSLMY MVCTRPDI
Subjt:  SSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDI

Query:  THAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAE
         HAVGVVS+++ NPGKEHWEAVKW+LRYL  T+   LC+G    +L+G+ DAD++ D+D+RKS++GY++T  G  +SW  KLQKCVALS TEAEY+A  E
Subjt:  THAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAE

Query:  AGKEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDM
         GKEMIW+  +L+ELG  Q + +++ DSQS I L KN +YH+RTKHI  RYH+ R +V++  + + KI   +NP DMLTK V   K  LCK L+ M
Subjt:  AGKEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDM

P25600 Putative transposon Ty5-1 protein YCL074W3.9e-4234.18Show/hide
Query:  MDVKTTFLHGDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMRE
        MDV T FL+  +DE IY++QP GF        V +L   +YGLKQAP    +  ++ + K GF R E +   Y +  +D  +++ +YVDD+L+A  S + 
Subjt:  MDVKTTFLHGDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMRE

Query:  INHLKAILSSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASV-PYASAVGSLMY
         + +K  L+ ++ MKDLG   + LG+ I +  S G + LS + YI K  S+ ++N  K   TPL N   L +  SP       H+  + PY S VG L++
Subjt:  INHLKAILSSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASV-PYASAVGSLMY

Query:  TMVCTRPDITHAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNG-KVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMF-KLQKCVALS
             RPDI++ V ++S+++  P   H E+ + +LRYL +T +  L Y +G ++ L  + DA      D   ST GY+  + G  V+W   KL+  + + 
Subjt:  TMVCTRPDITHAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNG-KVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMF-KLQKCVALS

Query:  YTEAEYVAIAEAGKEM
         TEAEY+  +E   E+
Subjt:  YTEAEYVAIAEAGKEM

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.6e-8138.59Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLN-KWVFKIKVEPDGR-RRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFL
        M  E+++   N+TW L   P     ++  +W+F  K   DG   R+KARLV KGY+QR G+DYAE FSPV+K  +IRI+L +    +  + Q+DV   FL
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLN-KWVFKIKVEPDGR-RRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFL

Query:  HGDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAIL
         G L +++YM QP GF    + + VCKL K+LYGLKQAPR  + +  +++   GF  S  D   ++ +   S V++L+YVDDILI G+    +++    L
Subjt:  HGDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAIL

Query:  SSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDI
        S  F +KD       LG+   R  +   L+LSQ +YI  +L++  M  AKP TTP+A   KLS     K  +  E      Y   VGSL Y +  TRPDI
Subjt:  SSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDI

Query:  THAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVV-LQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIA
        ++AV  +S++M  P +EH +A+K +LRYL+ T N  +    G  + L  + DAD + D D   ST+GYI  +    +SW  K QK V  S TEAEY ++A
Subjt:  THAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVV-LQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIA

Query:  EAGKEMIWMTDYLEELGQKQCK-KILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTK
            EM W+   L ELG +  +  +++ D+     L  NPV+HSR KHI   YHF R  V+ G + +  +       D LTK
Subjt:  EAGKEMIWMTDYLEELGQKQCK-KILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.3e-7937.55Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLN-KWVFKIKVEPDGR-RRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFL
        M  E+++   N+TW L   P     ++  +W+F  K   DG   R+KARLV KGY+QR G+DYAE FSPV+K  +IRI+L +    +  + Q+DV   FL
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLN-KWVFKIKVEPDGR-RRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFL

Query:  HGDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAIL
         G L +E+YM QP GF    +   VC+L K++YGLKQAPR  + +  +++   GF  S  D   ++ +   S +++L+YVDDILI G+    + H    L
Subjt:  HGDLDEEIYMQQPEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAIL

Query:  SSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDI
        S  F +K+       LG  I   R    L+LSQ +Y   +L++  M  AKP  TP+A   KL+     K  +  E      Y   VGSL Y +  TRPD+
Subjt:  SSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDI

Query:  THAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVV-LQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIA
        ++AV  +S+YM  P  +HW A+K +LRYL+ T +  +    G  + L  + DAD + D D   ST+GYI  +    +SW  K QK V  S TEAEY ++A
Subjt:  THAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGNGKVV-LQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIA

Query:  EAGKEMIWMTDYLEELG-QKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTK
            E+ W+   L ELG Q     +++ D+     L  NPV+HSR KHI   YHF R  V+ G + +  +       D LTK
Subjt:  EAGKEMIWMTDYLEELG-QKQCKKILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.5e-8138.26Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGR-RRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLH
        MDDE+ ++E  +TW +  LP  K+ +  KWV+KIK   DG   R+KARLV KGY+Q++GID+ E FSPV KL +++++L+I A+ N  L Q+D+   FL+
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGR-RRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLH

Query:  GDLDEEIYMQQPEGFAAPGKEHM----VCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLK
        GDLDEEIYM+ P G+AA   + +    VC L KS+YGLKQA RQ F KF   +   GF +S  D   +LK     ++ +L+YVDDI+I  ++   ++ LK
Subjt:  GDLDEEIYMQQPEGFAAPGKEHM----VCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLK

Query:  AILSSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTR
        + L S F+++DLG  K  LG+ I+  RSA  +N+ Q +Y   +L +  +   KP + P+   +  S       V+ +       Y   +G LMY  + TR
Subjt:  AILSSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTR

Query:  PDITHAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGN-GKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYV
         DI+ AV  +S++   P   H +AV  +L Y+  T    L Y +  ++ LQ F DA      D+R+ST+GY   +  +++SW  K Q+ V+ S  EAEY 
Subjt:  PDITHAVGVVSKYMANPGKEHWEAVKWLLRYLSSTSNTTLCYGN-GKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYV

Query:  AIAEAGKEMIWMTDYLEELGQKQCK-KILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTR
        A++ A  EM+W+  +  EL     K  +L  D+ + I +  N V+H RTKHI    H  R
Subjt:  AIAEAGKEMIWMTDYLEELGQKQCK-KILHTDSQSVIQLVKNPVYHSRTKHIRRRYHFTR

ATMG00810.1 DNA/RNA polymerases superfamily protein7.2e-3137.02Show/hide
Query:  VFLLLYVDDILIAGSSMREINHLKAILSSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEE
        ++LLLYVDDIL+ GSS   +N L   LSS F MKDLG     LG++I    S   L LSQ +Y E++L+   M + KP +TPL   +KL+      +V  
Subjt:  VFLLLYVDDILIAGSSMREINHLKAILSSVFEMKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEE

Query:  REHMASVPYASAVGSLMYTMVCTRPDITHAVGVVSKYMANPGKEHWEAVKWLLRYLSST-SNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTID
         ++     + S VG+L Y +  TRPDI++AV +V + M  P    ++ +K +LRY+  T  +    + N K+ +Q F D+D +    +R+ST+G+   + 
Subjt:  REHMASVPYASAVGSLMYTMVCTRPDITHAVGVVSKYMANPGKEHWEAVKWLLRYLSST-SNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTID

Query:  GTVVSWMFKLQKCVALSYTEAEYVAIAEAGKEMIW
          ++SW  K Q  V+ S TE EY A+A    E+ W
Subjt:  GTVVSWMFKLQKCVALSYTEAEYVAIAEAGKEMIW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)7.9e-1446.91Show/hide
Query:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGR-RRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSI
        M +E+ +L RN TW+L   P  +  L  KWVFK K+  DG   R KARLV KG+ Q +GI + E +SPVV+  TIR +L++
Subjt:  MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGR-RRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGAGATGAGCTCACTTGAAAGGAATAATACGTGGGTGCTGACTGAGTTGCCTACAGGAAAGAGAGCTCTGTTGAACAAATGGGTGTTCAAAATCAAGGTTGA
ACCAGATGGCAGAAGGAGGTTTAAGGCCCGGTTAGTAGTTAAAGGATATTCACAAAGAAAAGGCATTGATTATGCTGAGATCTTTTCTCCAGTTGTGAAATTAATTACTA
TCCGAATTCTGCTGAGTATTGTTGCATTGGAGAATTTGCACCTCGAGCAAATGGATGTAAAAACGACTTTTTTACATGGAGATCTAGATGAGGAGATCTATATGCAACAA
CCCGAAGGGTTTGCAGCTCCAGGCAAGGAGCACATGGTGTGTAAGCTCAATAAGAGCTTGTATGGACTGAAACAAGCACCGAGACAATTGTTCAAGAAGTTTGACTCCTT
CATGAGCAAGAGTGGTTTCCACAGAAGTGAAAAGGATCAGTGTTGCTACCTCAAGAAATACACTGATTCTTATGTGTTTCTACTTCTGTATGTGGATGATATACTAATTG
CTGGATCAAGTATGAGGGAGATAAACCACCTTAAGGCAATCTTGTCTTCAGTATTTGAGATGAAAGATTTAGGTGCAGCAAAGCAGATCCTTGGGATGAGGATTTCTCGA
GATAGATCTGCTGGCACATTAAATCTATCCCAAGAACAGTACATTGAGAAGGTGTTGTCCAAATTCAAGATGAATAACGCTAAACCCAGGACTACCCCCTTGGCAAATCA
TATTAAATTGTCAAAGGGGCAATCTCCCAAGACAGTTGAGGAACGTGAGCACATGGCATCAGTTCCGTACGCTTCTGCAGTTGGGAGTTTGATGTACACTATGGTCTGCA
CTAGACCTGACATAACACATGCAGTGGGAGTTGTTAGCAAGTACATGGCAAATCCAGGGAAGGAACATTGGGAAGCTGTGAAGTGGCTTCTGAGATATCTGAGTAGTACA
TCCAATACTACACTTTGTTATGGCAATGGCAAAGTAGTTCTGCAAGGTTTTGTGGATGCTGATCTGAGTGAAGATGTAGACTCCAGGAAGAGCACATCTGGGTATATCTA
CACTATAGATGGAACAGTAGTGAGTTGGATGTTCAAGCTTCAGAAATGCGTTGCTCTTTCATATACTGAAGCTGAGTACGTGGCTATAGCTGAAGCTGGAAAGGAGATGA
TATGGATGACAGACTATCTAGAAGAATTAGGCCAGAAGCAGTGCAAGAAGATCCTTCATACAGATAGTCAGAGTGTCATACAGTTGGTGAAAAACCCAGTCTATCATTCA
AGGACAAAACACATTAGAAGACGGTACCATTTCACTCGCAGGTTAGTGGAAGAAGGCGATATGTGTTTGGAGAAGATAGAGGGTGCAAAGAATCCAACAGACATGTTGAC
AAAATGTGTTGATGTTGGAAAACTAAGGTTATGCAAAGCCCTAATTGATATGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATGAGATGAGCTCACTTGAAAGGAATAATACGTGGGTGCTGACTGAGTTGCCTACAGGAAAGAGAGCTCTGTTGAACAAATGGGTGTTCAAAATCAAGGTTGA
ACCAGATGGCAGAAGGAGGTTTAAGGCCCGGTTAGTAGTTAAAGGATATTCACAAAGAAAAGGCATTGATTATGCTGAGATCTTTTCTCCAGTTGTGAAATTAATTACTA
TCCGAATTCTGCTGAGTATTGTTGCATTGGAGAATTTGCACCTCGAGCAAATGGATGTAAAAACGACTTTTTTACATGGAGATCTAGATGAGGAGATCTATATGCAACAA
CCCGAAGGGTTTGCAGCTCCAGGCAAGGAGCACATGGTGTGTAAGCTCAATAAGAGCTTGTATGGACTGAAACAAGCACCGAGACAATTGTTCAAGAAGTTTGACTCCTT
CATGAGCAAGAGTGGTTTCCACAGAAGTGAAAAGGATCAGTGTTGCTACCTCAAGAAATACACTGATTCTTATGTGTTTCTACTTCTGTATGTGGATGATATACTAATTG
CTGGATCAAGTATGAGGGAGATAAACCACCTTAAGGCAATCTTGTCTTCAGTATTTGAGATGAAAGATTTAGGTGCAGCAAAGCAGATCCTTGGGATGAGGATTTCTCGA
GATAGATCTGCTGGCACATTAAATCTATCCCAAGAACAGTACATTGAGAAGGTGTTGTCCAAATTCAAGATGAATAACGCTAAACCCAGGACTACCCCCTTGGCAAATCA
TATTAAATTGTCAAAGGGGCAATCTCCCAAGACAGTTGAGGAACGTGAGCACATGGCATCAGTTCCGTACGCTTCTGCAGTTGGGAGTTTGATGTACACTATGGTCTGCA
CTAGACCTGACATAACACATGCAGTGGGAGTTGTTAGCAAGTACATGGCAAATCCAGGGAAGGAACATTGGGAAGCTGTGAAGTGGCTTCTGAGATATCTGAGTAGTACA
TCCAATACTACACTTTGTTATGGCAATGGCAAAGTAGTTCTGCAAGGTTTTGTGGATGCTGATCTGAGTGAAGATGTAGACTCCAGGAAGAGCACATCTGGGTATATCTA
CACTATAGATGGAACAGTAGTGAGTTGGATGTTCAAGCTTCAGAAATGCGTTGCTCTTTCATATACTGAAGCTGAGTACGTGGCTATAGCTGAAGCTGGAAAGGAGATGA
TATGGATGACAGACTATCTAGAAGAATTAGGCCAGAAGCAGTGCAAGAAGATCCTTCATACAGATAGTCAGAGTGTCATACAGTTGGTGAAAAACCCAGTCTATCATTCA
AGGACAAAACACATTAGAAGACGGTACCATTTCACTCGCAGGTTAGTGGAAGAAGGCGATATGTGTTTGGAGAAGATAGAGGGTGCAAAGAATCCAACAGACATGTTGAC
AAAATGTGTTGATGTTGGAAAACTAAGGTTATGCAAAGCCCTAATTGATATGGTGTAG
Protein sequenceShow/hide protein sequence
MDDEMSSLERNNTWVLTELPTGKRALLNKWVFKIKVEPDGRRRFKARLVVKGYSQRKGIDYAEIFSPVVKLITIRILLSIVALENLHLEQMDVKTTFLHGDLDEEIYMQQ
PEGFAAPGKEHMVCKLNKSLYGLKQAPRQLFKKFDSFMSKSGFHRSEKDQCCYLKKYTDSYVFLLLYVDDILIAGSSMREINHLKAILSSVFEMKDLGAAKQILGMRISR
DRSAGTLNLSQEQYIEKVLSKFKMNNAKPRTTPLANHIKLSKGQSPKTVEEREHMASVPYASAVGSLMYTMVCTRPDITHAVGVVSKYMANPGKEHWEAVKWLLRYLSST
SNTTLCYGNGKVVLQGFVDADLSEDVDSRKSTSGYIYTIDGTVVSWMFKLQKCVALSYTEAEYVAIAEAGKEMIWMTDYLEELGQKQCKKILHTDSQSVIQLVKNPVYHS
RTKHIRRRYHFTRRLVEEGDMCLEKIEGAKNPTDMLTKCVDVGKLRLCKALIDMV