; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G009350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G009350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpaired amphipathic helix protein Sin3-like 3
Genome locationCmo_Chr05:7366112..7371408
RNA-Seq ExpressionCmoCh05G009350
SyntenyCmoCh05G009350
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR003822 - Paired amphipathic helix
IPR036600 - Paired amphipathic helix superfamily
IPR039774 - Transcriptional regulatory protein Sin3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599047.1 Paired amphipathic helix protein Sin3-like 3, partial [Cucurbita argyrosperma subsp. sororia]2.3e-9490.1Show/hide
Query:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
        MKNRGEADGS  ++ +       +  +  IGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
Subjt:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP

Query:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEG
        LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEG
Subjt:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEG

KAG7029992.1 Paired amphipathic helix protein Sin3-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-7879.7Show/hide
Query:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
        MKNRGEADGS RKLTAEDALEFLKNVKD IGNE EKYE FLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
Subjt:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP

Query:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIE
        LKLGDALDYVSEVK                                 VCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEG  L E
Subjt:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIE

XP_022946192.1 paired amphipathic helix protein Sin3-like 3 [Cucurbita moschata]1.7e-14598.86Show/hide
Query:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
        MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
Subjt:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP

Query:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMN
        LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMN
Subjt:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMN

Query:  QKLPEVDVPQQFVKCLDVFDREIITPSELHSMVALLLITRVADVDSEHREDFYKRSTFRSEYR
        QKLPEVDVPQQFVKCLDVFDREIITPSELHSMVALLLITRVADVDSEHREDFYKRSTFR+  R
Subjt:  QKLPEVDVPQQFVKCLDVFDREIITPSELHSMVALLLITRVADVDSEHREDFYKRSTFRSEYR

XP_022999412.1 paired amphipathic helix protein Sin3-like 3 [Cucurbita maxima]2.3e-9496.07Show/hide
Query:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
        MKNRGEADGS RKLTAEDALEFLKNVKDVIGNE EKYEEFLQLMKDLAFQRID VGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
Subjt:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP

Query:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNND
        +KLGDAL+Y+SEVKRRFEGEFHIFNSFMRNLHLYKRGKKPL+ELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNND
Subjt:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNND

XP_023547238.1 paired amphipathic helix protein Sin3-like 3 [Cucurbita pepo subsp. pepo]1.1e-14196.58Show/hide
Query:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
        MKNRGEADGS RKLTAEDALEFLKNVKDVIGNE EKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
Subjt:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP

Query:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMN
        LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPL+ELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMN
Subjt:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMN

Query:  QKLPEVDVPQQFVKCLDVFDREIITPSELHSMVALLLITRVADVDSEHREDFYKRSTFRSEYR
        QKL EVDVPQQFVKCLDVFDREIITPSELHSMVALLLITRVADVD+EH EDFYKRSTFR+  R
Subjt:  QKLPEVDVPQQFVKCLDVFDREIITPSELHSMVALLLITRVADVDSEHREDFYKRSTFRSEYR

TrEMBL top hitse value%identityAlignment
A0A0A0KQL9 HDAC_interact domain-containing protein1.3e-5839.94Show/hide
Query:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD
        GS +KLT  DALE+LKNVKD+  ++ EKYE+FL++MK+   QRID VGVI  VK+LF+GH DLILGFNTFLP+ YAI CPLEDETPP++++P++  +A++
Subjt:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD

Query:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN----------------------------DPE
        +V ++K RFEG+ H++ SF+  L+LY++  K ++E++REV  L+QDHPDL+  F  FLP  S TT++N+                              +
Subjt:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN----------------------------DPE

Query:  QNIGVDRPD----------------------------------------------------------------------------EEGMSLIEKMNQKLP
         +IGV+ PD                                                                             EGMS IEK+  KLP
Subjt:  QNIGVDRPD----------------------------------------------------------------------------EEGMSLIEKMNQKLP

Query:  EVDVPQQFVKCLDVFDREIITPSELHSMVALLL
         VDV Q+FVKCLD+FD+EIIT SELHS+V  LL
Subjt:  EVDVPQQFVKCLDVFDREIITPSELHSMVALLL

A0A1S3CPW0 paired amphipathic helix protein Sin3-like 4 isoform X11.7e-5839.94Show/hide
Query:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD
        GS +KLT  DALE+LKNVK +  +  EKYE+FL++MK+   QRID VGVI  VK+LF+GH DLILGFNTFLP+ YAI CPLEDETPP++++P++  +A++
Subjt:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD

Query:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN----------------------------DPE
        +V ++K RFEG+ H++ SF+  L+LY++  K ++E++REV  L+QDHPDL+  F  FLP  S TT++N+                              +
Subjt:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN----------------------------DPE

Query:  QNIGVDRPD----------------------------------------------------------------------------EEGMSLIEKMNQKLP
         +IGV+ PD                                                                             EGMS IEK+ QKLP
Subjt:  QNIGVDRPD----------------------------------------------------------------------------EEGMSLIEKMNQKLP

Query:  EVDVPQQFVKCLDVFDREIITPSELHSMVALLL
         VDV Q+FVKCLD+FD+EIIT SELHS+V  LL
Subjt:  EVDVPQQFVKCLDVFDREIITPSELHSMVALLL

A0A5A7TAL0 Paired amphipathic helix protein Sin3-like 4 isoform X13.8e-5840.54Show/hide
Query:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD
        GS +KLT  DALE+LKNVK +  +  EKYE+FL++MK+   QRID VGVI  VK+LF+GH DLILGFNTFLP+ YAI CPLEDETPP++++P++  +A++
Subjt:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD

Query:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN----------------DPEQ-----------
        +V ++K RFEG+ H++ SF+  L+LY++  K ++E++REV  L+QDHPDL+  F  FLP  S TT++N+                 P Q           
Subjt:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN----------------DPEQ-----------

Query:  -NIGVDRPD----------------------------------------------------------------------------EEGMSLIEKMNQKLP
         +IGV+ PD                                                                             EGMS IEK+ QKLP
Subjt:  -NIGVDRPD----------------------------------------------------------------------------EEGMSLIEKMNQKLP

Query:  EVDVPQQFVKCLDVFDREIITPSELHSMVALLL
         VDV Q+FVKCLD+FD+EIIT SELHS+V  LL
Subjt:  EVDVPQQFVKCLDVFDREIITPSELHSMVALLL

A0A6J1G327 paired amphipathic helix protein Sin3-like 38.2e-14698.86Show/hide
Query:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
        MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
Subjt:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP

Query:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMN
        LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMN
Subjt:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMN

Query:  QKLPEVDVPQQFVKCLDVFDREIITPSELHSMVALLLITRVADVDSEHREDFYKRSTFRSEYR
        QKLPEVDVPQQFVKCLDVFDREIITPSELHSMVALLLITRVADVDSEHREDFYKRSTFR+  R
Subjt:  QKLPEVDVPQQFVKCLDVFDREIITPSELHSMVALLLITRVADVDSEHREDFYKRSTFRSEYR

A0A6J1KAT5 paired amphipathic helix protein Sin3-like 31.1e-9496.07Show/hide
Query:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
        MKNRGEADGS RKLTAEDALEFLKNVKDVIGNE EKYEEFLQLMKDLAFQRID VGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP
Subjt:  MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRP

Query:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNND
        +KLGDAL+Y+SEVKRRFEGEFHIFNSFMRNLHLYKRGKKPL+ELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNND
Subjt:  LKLGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNND

SwissProt top hitse value%identityAlignment
O04539 Paired amphipathic helix protein Sin3-like 41.2e-3742.86Show/hide
Query:  STRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDY
        S +KLT  DAL +LK VKD   ++ +KY+EFL++MKD   QR+D  GVI  VK LF+G+ +LILGFNTFLP+ + I    ED+ P   ++P++  +A+ +
Subjt:  STRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDY

Query:  VSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN
        V+++K RF+G+  ++ SF+  L++Y++  K + E++ EV +L +DH DL+  F  FLP  S T ++N+
Subjt:  VSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN

O48686 Paired amphipathic helix protein Sin3-like 34.2e-3842.49Show/hide
Query:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD
        GS +KLT  DAL +LK VKD   ++  KY+EFL++MK+   QR+D  GVIT VK LF+GH +LILGFNTFLP+ + I    ED  PP ++R ++  +A+ 
Subjt:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD

Query:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMNQ
        +V+++K RF+G+  ++ SF+  L++Y+R  K + E+++EV +L +DH DL+  F  FLP  S T +    P     V    E G+SL +K ++
Subjt:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMNQ

Q9LFQ3 Paired amphipathic helix protein Sin3-like 26.9e-3341.72Show/hide
Query:  GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLG
        GE   +T+KLT +DAL +LK VK++  ++ +KY+ FL++MKD   Q+ D  GVI+ VK LF+GHN+LI GFNTFLP+ + I   L+D   P  ++ ++  
Subjt:  GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLG

Query:  DALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP
        +A+ +V+++K RF+    ++ SF+  L++Y++  K + E++ EV  L +DH DL+E F  FLP
Subjt:  DALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP

Q9SRH9 Paired amphipathic helix protein Sin3-like 14.8e-3443.64Show/hide
Query:  EADGSTR---KLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLK
        E  GS R   KLT  DAL +L+ VK++  ++ EKY+ FL++MKD   QR D  GVI  VK LF+GHN+LI GFNTFLP+ Y I    ED+  P  ++ ++
Subjt:  EADGSTR---KLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLK

Query:  LGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP
           A+++V+++K RF+ + H++ SF+  L++Y++  K + E++ EV +L Q H DL+E F  FLP
Subjt:  LGDALDYVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP

Q9XIE1 Paired amphipathic helix protein Sin3-like 52.1e-3445.03Show/hide
Query:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD
        G+T  LT  DAL +LK VKD+  +  EKYE FL +MKD   QR+D  GVI  VK LF+G++DL+LGFNTFLP+ Y I    EDE P   ++P+    A++
Subjt:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD

Query:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDP
        +V+ +K RF G+   +  F+  L++Y++  K +NE+++EV +L QDH DL+  F  FLP     + S NDP
Subjt:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDP

Arabidopsis top hitse value%identityAlignment
AT1G24190.1 SIN3-like 33.0e-3942.49Show/hide
Query:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD
        GS +KLT  DAL +LK VKD   ++  KY+EFL++MK+   QR+D  GVIT VK LF+GH +LILGFNTFLP+ + I    ED  PP ++R ++  +A+ 
Subjt:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD

Query:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMNQ
        +V+++K RF+G+  ++ SF+  L++Y+R  K + E+++EV +L +DH DL+  F  FLP  S T +    P     V    E G+SL +K ++
Subjt:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMNQ

AT1G24190.2 SIN3-like 33.0e-3942.49Show/hide
Query:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD
        GS +KLT  DAL +LK VKD   ++  KY+EFL++MK+   QR+D  GVIT VK LF+GH +LILGFNTFLP+ + I    ED  PP ++R ++  +A+ 
Subjt:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD

Query:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMNQ
        +V+++K RF+G+  ++ SF+  L++Y+R  K + E+++EV +L +DH DL+  F  FLP  S T +    P     V    E G+SL +K ++
Subjt:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMNQ

AT1G59890.1 SIN3-like 51.5e-3545.03Show/hide
Query:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD
        G+T  LT  DAL +LK VKD+  +  EKYE FL +MKD   QR+D  GVI  VK LF+G++DL+LGFNTFLP+ Y I    EDE P   ++P+    A++
Subjt:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD

Query:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDP
        +V+ +K RF G+   +  F+  L++Y++  K +NE+++EV +L QDH DL+  F  FLP     + S NDP
Subjt:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDP

AT1G59890.3 SIN3-like 51.5e-3545.03Show/hide
Query:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD
        G+T  LT  DAL +LK VKD+  +  EKYE FL +MKD   QR+D  GVI  VK LF+G++DL+LGFNTFLP+ Y I    EDE P   ++P+    A++
Subjt:  GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALD

Query:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDP
        +V+ +K RF G+   +  F+  L++Y++  K +NE+++EV +L QDH DL+  F  FLP     + S NDP
Subjt:  YVSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDP

AT1G70060.1 SIN3-like 48.6e-3942.86Show/hide
Query:  STRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDY
        S +KLT  DAL +LK VKD   ++ +KY+EFL++MKD   QR+D  GVI  VK LF+G+ +LILGFNTFLP+ + I    ED+ P   ++P++  +A+ +
Subjt:  STRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDY

Query:  VSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN
        V+++K RF+G+  ++ SF+  L++Y++  K + E++ EV +L +DH DL+  F  FLP  S T ++N+
Subjt:  VSEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACCGCGGGGAGGCAGATGGCAGTACCCGGAAATTAACAGCGGAGGATGCCCTAGAATTTCTCAAGAATGTGAAGGACGTCATTGGAAACGAGGCGGAAAAATA
TGAAGAATTTCTTCAACTCATGAAGGATTTAGCGTTTCAAAGAATTGACATTGTGGGCGTCATAACAGGGGTAAAGCGTCTATTCAGAGGTCATAATGACCTGATTTTGG
GCTTTAATACTTTTTTGCCACAAAGATATGCAATAGCTTGTCCTCTTGAGGATGAAACGCCTCCTCGAAGGAGGCGGCCTCTTAAACTTGGAGACGCTTTGGACTATGTC
AGTGAGGTTAAGAGACGGTTTGAAGGTGAGTTCCATATATTCAATTCATTTATGAGAAATTTGCATTTGTACAAAAGAGGAAAAAAGCCTCTAAATGAGCTCCACCGGGA
GGTTTGTGTACTGATGCAAGACCACCCAGACCTTGTTGAGGGTTTTGCTGATTTTCTTCCTTGTCCTTCACTCACAACAACCTCAAACAATGATCCTGAGCAGAACATTG
GTGTTGACCGTCCTGATGAAGAAGGTATGTCTTTAATTGAGAAGATGAATCAAAAGTTACCAGAAGTTGATGTTCCACAACAATTTGTGAAATGCCTTGATGTTTTTGAC
AGGGAAATAATCACTCCATCGGAACTGCATTCTATGGTGGCTCTTCTACTAATTACACGTGTAGCTGACGTGGATTCGGAACACAGGGAAGATTTCTATAAGCGTTCAAC
TTTCAGGAGTGAATACAGGGAACCCCTGGTACAGCTTTAA
mRNA sequenceShow/hide mRNA sequence
GAGTGCTATAGATCACCGTAGTTAACAGGTGCTTTGTCAGAAATGAAGAACCGCGGGGAGGCAGATGGCAGTACCCGGAAATTAACAGCGGAGGATGCCCTAGAATTTCT
CAAGAATGTGAAGGACGTCATTGGAAACGAGGCGGAAAAATATGAAGAATTTCTTCAACTCATGAAGGATTTAGCGTTTCAAAGAATTGACATTGTGGGCGTCATAACAG
GGGTAAAGCGTCTATTCAGAGGTCATAATGACCTGATTTTGGGCTTTAATACTTTTTTGCCACAAAGATATGCAATAGCTTGTCCTCTTGAGGATGAAACGCCTCCTCGA
AGGAGGCGGCCTCTTAAACTTGGAGACGCTTTGGACTATGTCAGTGAGGTTAAGAGACGGTTTGAAGGTGAGTTCCATATATTCAATTCATTTATGAGAAATTTGCATTT
GTACAAAAGAGGAAAAAAGCCTCTAAATGAGCTCCACCGGGAGGTTTGTGTACTGATGCAAGACCACCCAGACCTTGTTGAGGGTTTTGCTGATTTTCTTCCTTGTCCTT
CACTCACAACAACCTCAAACAATGATCCTGAGCAGAACATTGGTGTTGACCGTCCTGATGAAGAAGGTATGTCTTTAATTGAGAAGATGAATCAAAAGTTACCAGAAGTT
GATGTTCCACAACAATTTGTGAAATGCCTTGATGTTTTTGACAGGGAAATAATCACTCCATCGGAACTGCATTCTATGGTGGCTCTTCTACTAATTACACGTGTAGCTGA
CGTGGATTCGGAACACAGGGAAGATTTCTATAAGCGTTCAACTTTCAGGAGTGAATACAGGGAACCCCTGGTACAGCTTTAA
Protein sequenceShow/hide protein sequence
MKNRGEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYV
SEVKRRFEGEFHIFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRPDEEGMSLIEKMNQKLPEVDVPQQFVKCLDVFD
REIITPSELHSMVALLLITRVADVDSEHREDFYKRSTFRSEYREPLVQL