; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G009700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G009700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25-like
Genome locationCmo_Chr05:7810395..7811766
RNA-Seq ExpressionCmoCh05G009700
SyntenyCmoCh05G009700
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030012.1 CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-4797.06Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM--TTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM  TTTTTAAQFGGISKEMEVVGG GGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM--TTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA
XP_022946527.1 uncharacterized protein LOC111450563 [Cucurbita moschata]1.9e-49100Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
XP_022999782.1 uncharacterized protein LOC111494028 [Cucurbita maxima]1.8e-4797Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM TT TAAQFGGISKEMEVVGGRGGKDVVRSEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
XP_023521565.1 uncharacterized protein LOC111785387 [Cucurbita pepo subsp. pepo]4.6e-4898Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM T TTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
XP_038886261.1 uncharacterized protein LOC120076488 [Benincasa hispida]2.2e-2971.56Show/hide
Query:  MSSYSPSCK---AMAVMGFIWLLLVNGSHQRGQSVATGM------TTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAG
        MS YSPSCK   ++AVM FI+LLLVNGSHQR Q VA  M       T T  A+F GISKEM+VV G  GK VV  EWHLNYMSKRRVPNGPDPIHNRRAG
Subjt:  MSSYSPSCK---AMAVMGFIWLLLVNGSHQRGQSVATGM------TTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAG

Query:  NSGRPPGKA
        NSGRPPGKA
Subjt:  NSGRPPGKA
TrEMBL top hitse value%identityAlignment
A0A0A0KJ25 Uncharacterized protein9.8e-2866.35Show/hide
Query:  MSSYSPSCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVV--GGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
        M+ Y  SCK  ++ +M FIWLLL NGS QR + V  G  TT T  +  GISKE  V   GGRGGK V   EWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MSSYSPSCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVV--GGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA
A0A1S3CMA2 uncharacterized protein LOC1035025973.9e-2465.62Show/hide
Query:  SCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
        SCK  ++ VM FIWLLL NGS QR + V  G  TT    +F G+ K+  VV G GGK     EWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Subjt:  SCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
A0A5A7TRB3 Clavata3/esr-related 26, putative isoform 13.9e-2465.62Show/hide
Query:  SCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
        SCK  ++ VM FIWLLL NGS QR + V  G  TT    +F G+ K+  VV G GGK     EWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Subjt:  SCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
A0A6J1G3Y8 uncharacterized protein LOC1114505639.1e-50100Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
A0A6J1KBR7 uncharacterized protein LOC1114940288.5e-4897Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM TT TAAQFGGISKEMEVVGGRGGKDVVRSEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
SwissProt top hitse value%identityAlignment
Q8LFL4 CLAVATA3/ESR (CLE)-related protein 251.1e-0463.16Show/hide
Query:  GKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP
        GKDV     +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  GKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP
Arabidopsis top hitse value%identityAlignment
AT1G69970.2 CLAVATA3/ESR-RELATED 262.5e-0778.12Show/hide
Query:  LNYM-SKRRVPNGPDPIHNRRAGNSGRPPGKA
        L+Y+ SKR+VP GPDPIHNRRAGNS RPPG+A
Subjt:  LNYM-SKRRVPNGPDPIHNRRAGNSGRPPGKA
AT3G28455.1 CLAVATA3/ESR-RELATED 258.0e-0663.16Show/hide
Query:  GKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP
        GKDV     +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  GKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTTATTCTCCTTCTTGTAAGGCCATGGCTGTTATGGGGTTTATTTGGCTTTTGTTAGTGAATGGTTCCCATCAACGGGGACAATCGGTGGCAACCGGGATGAC
GACGACAACGACGGCAGCTCAATTCGGTGGAATTTCTAAAGAGATGGAGGTGGTCGGTGGTCGTGGTGGCAAGGACGTTGTTCGTTCAGAATGGCATCTCAACTACATGA
GTAAAAGAAGAGTTCCTAATGGCCCTGATCCTATTCATAACAGGAGAGCAGGAAACTCTGGAAGACCACCCGGCAAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
TCTTTCTTTCCATTTGTACGTAAAAAGACGTCTCTTTGTTTTGGTTTGTGCATCAAAATACACACAAAGCCAAAGTAAAAGATGAGTGTCGTAGTATAAAGCAACAAGGG
TTCCCTCCTTCTCATGTTTGAAGCCATTTATTCTCTCTCTCTCCTCTCTCTCTCTCTCCTCACTCTCTCTCTCTCTCTCTCAACATCCCAAAATCAAAATCCTGTCATGT
AGTGATTTCTCTCAAAGATTGCCCATGTTGTTCAAGCTTTAAGAGCATACTATTGTCTAGAGAGAGAGGAAATGAGTTCTTATTCTCCTTCTTGTAAGGCCATGGCTGTT
ATGGGGTTTATTTGGCTTTTGTTAGTGAATGGTTCCCATCAACGGGGACAATCGGTGGCAACCGGGATGACGACGACAACGACGGCAGCTCAATTCGGTGGAATTTCTAA
AGAGATGGAGGTGGTCGGTGGTCGTGGTGGCAAGGACGTTGTTCGTTCAGAATGGCATCTCAACTACATGAGTAAAAGAAGAGTTCCTAATGGCCCTGATCCTATTCATA
ACAGGAGAGCAGGAAACTCTGGAAGACCACCCGGCAAGGCTTAACCTCGGGAATGAAACTGGGCTTTCAAGATGACACAAGATTGCACCATCAGCTATCTTGTATGTGTT
ACTTTAGGAATGAATGATGAAAACCTATCAAATCAATTCTCGGTTAGAATTTAGGACTCGTTCGATAATATTTTTGTTTTTTATTTTTAAATTTTAAAGTTTATGTGTAT
TTATTACCAGGCGTGTTTATCTAGTTCGAACCCGCACAAAATTTAAAATTTTAATAAATGCTTTTAAAAAATAGTTAAAAACCACTTTTGAATAATTTTTTTATTGAACA
TCACAAAC
Protein sequenceShow/hide protein sequence
MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA