; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G009830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G009830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionincreased DNA methylation 3-like
Genome locationCmo_Chr05:7919735..7920554
RNA-Seq ExpressionCmoCh05G009830
SyntenyCmoCh05G009830
Gene Ontology termsGO:1901537 - positive regulation of DNA demethylation (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR039321 - Increased DNA methylation 2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599085.1 Increased DNA methylation 3, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7497.95Show/hide
Query:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
        M+MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKV+IEGVMAGPGLLK+SSAMYEMKVQQLCPPGP
Subjt:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP

Query:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
Subjt:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

XP_008464812.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo]1.6e-6589.58Show/hide
Query:  MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT
        MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFEIK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP T
Subjt:  MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT

Query:  VSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        VSFKLPGPVDPRLSSPSFR DGILEVVVMKS+A PTV+DS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

XP_022945989.1 increased DNA methylation 3-like [Cucurbita moschata]5.9e-76100Show/hide
Query:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
        MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
Subjt:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP

Query:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
Subjt:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

XP_022999775.1 increased DNA methylation 3-like [Cucurbita maxima]7.7e-7699.32Show/hide
Query:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
        MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
Subjt:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP

Query:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        LT+SFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
Subjt:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

XP_023546049.1 increased DNA methylation 3-like [Cucurbita pepo subsp. pepo]1.7e-7599.32Show/hide
Query:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
        M+MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
Subjt:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP

Query:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
Subjt:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

TrEMBL top hitse value%identityAlignment
A0A0A0KDF2 SHSP domain-containing protein7.8e-6689.58Show/hide
Query:  MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT
        MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFEIK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP T
Subjt:  MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT

Query:  VSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        VSFKLPGPVDPRLSSPSFR DGILEVVVMKS+A PTV+DS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

A0A1S3CMV5 increased DNA methylation 3 isoform X27.8e-6689.58Show/hide
Query:  MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT
        MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFEIK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP T
Subjt:  MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT

Query:  VSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        VSFKLPGPVDPRLSSPSFR DGILEVVVMKS+A PTV+DS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

A0A5D3CM92 Increased DNA methylation 3 isoform X27.8e-6689.58Show/hide
Query:  MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT
        MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFEIK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP T
Subjt:  MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT

Query:  VSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        VSFKLPGPVDPRLSSPSFR DGILEVVVMKS+A PTV+DS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

A0A6J1G2H5 increased DNA methylation 3-like2.8e-76100Show/hide
Query:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
        MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
Subjt:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP

Query:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
Subjt:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

A0A6J1KGJ6 increased DNA methylation 3-like3.7e-7699.32Show/hide
Query:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
        MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP
Subjt:  MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGP

Query:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
        LT+SFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL
Subjt:  LTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

SwissProt top hitse value%identityAlignment
Q84K79 Alpha-crystallin domain-containing protein 22.38.7e-2244.35Show/hide
Query:  TRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLP
        ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVA+PGV +D  +   EI+ DGK+ I+G    G   + + + +++M  Q LCPPG  T++F+LP
Subjt:  TRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLP

Query:  GPVDPRLSSPSFRADGILEVVVMK
        GPV     + +F +DG+LE VV K
Subjt:  GPVDPRLSSPSFRADGILEVVVMK

Q8RWL4 Increased DNA methylation 21.1e-2143.38Show/hide
Query:  GHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGV-MAGPGLLKESSAMYEMKVQQLCPPGPLTV
        G       KP V      +E   G  +GL+DIG  + AYLFRV++PGV++D      E++ +GKV + GV   G   +K  S ++EM+ + LCPPG  +V
Subjt:  GHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGV-MAGPGLLKESSAMYEMKVQQLCPPGPLTV

Query:  SFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTV
        SF+LPGPV P   S +F  DGILE VVMK+    TV
Subjt:  SFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTV

Q9SYQ0 Increased DNA methylation 33.0e-3052.03Show/hide
Query:  KPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPV
        +PSV+ TGTA++ + G  +G+VDIGV++ AY F+VA+PGVRKD  +   EI+ DGKV +EG    G   +K  S ++EM +++LCPPGP  + F LPGPV
Subjt:  KPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPV

Query:  DPRLSSPSFRADGILEVVVMKSK
        DPRL SP+FR+DGI E V+++ K
Subjt:  DPRLSSPSFRADGILEVVVMKSK

Arabidopsis top hitse value%identityAlignment
AT1G20870.1 HSP20-like chaperones superfamily protein2.1e-3152.03Show/hide
Query:  KPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPV
        +PSV+ TGTA++ + G  +G+VDIGV++ AY F+VA+PGVRKD  +   EI+ DGKV +EG    G   +K  S ++EM +++LCPPGP  + F LPGPV
Subjt:  KPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPV

Query:  DPRLSSPSFRADGILEVVVMKSK
        DPRL SP+FR+DGI E V+++ K
Subjt:  DPRLSSPSFRADGILEVVVMKSK

AT1G54850.1 HSP20-like chaperones superfamily protein6.2e-2344.35Show/hide
Query:  TRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLP
        ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVA+PGV +D  +   EI+ DGK+ I+G    G   + + + +++M  Q LCPPG  T++F+LP
Subjt:  TRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLP

Query:  GPVDPRLSSPSFRADGILEVVVMK
        GPV     + +F +DG+LE VV K
Subjt:  GPVDPRLSSPSFRADGILEVVVMK

AT1G76440.1 HSP20-like chaperones superfamily protein1.7e-3659.83Show/hide
Query:  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRL
        V  TGTA  GS GPPIGLVDIGVSE AY+FRV++PG+ K+  K+K EI+R+G+V I+GV+    +  ++  +Y M+VQQLCPPGP +++F LPG VDPRL
Subjt:  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRL

Query:  SSPSFRADGILEVVVMK
         SP+FR+DGI EVVV+K
Subjt:  SSPSFRADGILEVVVMK

AT1G76440.2 HSP20-like chaperones superfamily protein1.7e-3659.83Show/hide
Query:  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRL
        V  TGTA  GS GPPIGLVDIGVSE AY+FRV++PG+ K+  K+K EI+R+G+V I+GV+    +  ++  +Y M+VQQLCPPGP +++F LPG VDPRL
Subjt:  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRL

Query:  SSPSFRADGILEVVVMK
         SP+FR+DGI EVVV+K
Subjt:  SSPSFRADGILEVVVMK

AT1G76440.3 HSP20-like chaperones superfamily protein1.7e-3659.83Show/hide
Query:  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRL
        V  TGTA  GS GPPIGLVDIGVSE AY+FRV++PG+ K+  K+K EI+R+G+V I+GV+    +  ++  +Y M+VQQLCPPGP +++F LPG VDPRL
Subjt:  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRL

Query:  SSPSFRADGILEVVVMK
         SP+FR+DGI EVVV+K
Subjt:  SSPSFRADGILEVVVMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGGAAGGCCATGGCGATCAGACGAGGCTCAAACCATCAGTTATTTTAACTGGAACAGCCAATGAAGGTAGCTCTGGCCCTCCTATTGGTCTTGTTGATATTGG
CGTGAGTGAAGGTGCATACCTCTTCCGCGTTGCAATGCCTGGTGTACGAAAGGATCCAAGTAAGGTAAAATTTGAGATCAAAAGGGATGGTAAGGTTCAGATTGAAGGAG
TGATGGCAGGTCCAGGCCTCTTAAAAGAATCATCAGCTATGTACGAGATGAAAGTCCAGCAACTGTGTCCTCCGGGACCTCTCACGGTTTCTTTTAAGCTGCCTGGACCA
GTCGATCCACGGTTGTCGTCTCCTAGTTTCCGGGCTGATGGTATTCTGGAAGTGGTGGTTATGAAGTCTAAAGCACCTCCAACAGTGTCTGATTCCTACCCACCATTGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGACATGGAAGGCCATGGCGATCAGACGAGGCTCAAACCATCAGTTATTTTAACTGGAACAGCCAATGAAGGTAGCTCTGGCCCTCCTATTGGTCTTGTTGATATTGG
CGTGAGTGAAGGTGCATACCTCTTCCGCGTTGCAATGCCTGGTGTACGAAAGGATCCAAGTAAGGTAAAATTTGAGATCAAAAGGGATGGTAAGGTTCAGATTGAAGGAG
TGATGGCAGGTCCAGGCCTCTTAAAAGAATCATCAGCTATGTACGAGATGAAAGTCCAGCAACTGTGTCCTCCGGGACCTCTCACGGTTTCTTTTAAGCTGCCTGGACCA
GTCGATCCACGGTTGTCGTCTCCTAGTTTCCGGGCTGATGGTATTCTGGAAGTGGTGGTTATGAAGTCTAAAGCACCTCCAACAGTGTCTGATTCCTACCCACCATTGTG
ATGAGTATGATGGAGAGAGGTATCTGGTTTTGCTGTCTCCTTTTGTTCTTCATTACTAGGCACTTGAATTACCCAAAGACACAAAAATGATGATGAAAAAGTTTCACTAA
GAATAGTGTATTTAGAGTTTTCTATGTTAACTATTTCTTTTCATATGAAGTAGGGTTTTTAAATCACTTGCAATGTAATTTAATCCATAGTTTTGCCCATTTAAAGTCTA
CTCTTTTTTACTTGATAGTAGCTTTTATC
Protein sequenceShow/hide protein sequence
MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGP
VDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL