; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G009970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G009970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description50S ribosomal protein L21
Genome locationCmo_Chr05:8032283..8041797
RNA-Seq ExpressionCmoCh05G009970
SyntenyCmoCh05G009970
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001787 - Ribosomal protein L21
IPR018258 - Ribosomal protein L21, conserved site
IPR028909 - Ribosomal protein L21-like
IPR036164 - L21-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599098.1 Catalase isozyme 2, partial [Cucurbita argyrosperma subsp. sororia]2.0e-13498.47Show/hide
Query:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
        MANRRCLQVLTRHA AIFSTKPYIHSLKI PSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
Subjt:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV

Query:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
        PSRGMQKEYTKEEKEAEAA+IGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILN+VLLLGSSRQTIVGRPTVPSAV
Subjt:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV

Query:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGK
        VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGK
Subjt:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGK

KAG7030035.1 50S ribosomal protein L21, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-13998.52Show/hide
Query:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
        MANRRCLQVLTRHA AIFSTKPYIHSLKI PSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
Subjt:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV

Query:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
        PSRGMQKEYTKEEKEAEAA+IGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILN+VLLLGSSRQTIVGRPTVPSAV
Subjt:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV

Query:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
        VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
Subjt:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA

XP_022946851.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita moschata]4.9e-141100Show/hide
Query:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
        MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
Subjt:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV

Query:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
        PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
Subjt:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV

Query:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
        VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
Subjt:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA

XP_022999749.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita maxima]1.9e-13797.78Show/hide
Query:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
        MANRRCLQVLTRHA AIFSTKPYIHSLKI PSFLSQNFRTH SVPNCLFAK+DPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDD SV
Subjt:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV

Query:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
        PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSS VFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
Subjt:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV

Query:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
        VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
Subjt:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA

XP_023545372.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita pepo subsp. pepo]1.6e-13998.89Show/hide
Query:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
        MANRRCLQVLTRHA AIFSTKPYIHSLKI PSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
Subjt:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV

Query:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
        PSRGMQKEYTKEEKEAEAA+IGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
Subjt:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV

Query:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
        VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
Subjt:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA

TrEMBL top hitse value%identityAlignment
A0A5A7T510 50S ribosomal protein L211.2e-11381.21Show/hide
Query:  VYRSEAIRITTMANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTE-EDDDEDDE
        +Y  +AIRITTMANRRCLQVLTRHA AI STKPYIH+LKI PS L +NF THAS+ NCL AK DPSLCT WSH+RYLSSDS+NGNEDD TE ED+DEDDE
Subjt:  VYRSEAIRITTMANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTE-EDDDEDDE

Query:  DYDSGEDDDISVPSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQ
         YDS EDD IS  SR M+KEYTKEE EAEAA+IGYKV+GP+D+S  VFKPYEP FAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILN+VLL+GSS Q
Subjt:  DYDSGEDDDISVPSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQ

Query:  TIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
        TIVGRPTVPSA VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI+DI+GI+KPE I K SKV  K  +QV+VAA
Subjt:  TIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA

A0A6J1G2G3 uncharacterized protein LOC1114502151.4e-125100Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAMKKVALRDVQNDNRSVVYNYPETSCSLGGKLVNGSKVSGSKRSNPTCSPSSAIHQSFKGIGVNEHIIYANG
        MIDSKLNSGGMGSCETHLSMYKSKQSPIAMKKVALRDVQNDNRSVVYNYPETSCSLGGKLVNGSKVSGSKRSNPTCSPSSAIHQSFKGIGVNEHIIYANG
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAMKKVALRDVQNDNRSVVYNYPETSCSLGGKLVNGSKVSGSKRSNPTCSPSSAIHQSFKGIGVNEHIIYANG

Query:  EVDVKPGKKRALGGSTSCAPAFSSLAASPMAFSPVRSSLPIFTEKPGNFLAVAGSNLLGIHPGLEILHSVDSNGITDEQRTERLFNLQNLLKHCDESDQK
        EVDVKPGKKRALGGSTSCAPAFSSLAASPMAFSPVRSSLPIFTEKPGNFLAVAGSNLLGIHPGLEILHSVDSNGITDEQRTERLFNLQNLLKHCDESDQK
Subjt:  EVDVKPGKKRALGGSTSCAPAFSSLAASPMAFSPVRSSLPIFTEKPGNFLAVAGSNLLGIHPGLEILHSVDSNGITDEQRTERLFNLQNLLKHCDESDQK

Query:  GFIELLHGLPPSELSRLAINLEKKSMHLSVEE
        GFIELLHGLPPSELSRLAINLEKKSMHLSVEE
Subjt:  GFIELLHGLPPSELSRLAINLEKKSMHLSVEE

A0A6J1G4S2 50S ribosomal protein L21, mitochondrial-like2.4e-141100Show/hide
Query:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
        MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
Subjt:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV

Query:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
        PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
Subjt:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV

Query:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
        VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
Subjt:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA

A0A6J1KDZ7 50S ribosomal protein L21, mitochondrial-like9.3e-13897.78Show/hide
Query:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV
        MANRRCLQVLTRHA AIFSTKPYIHSLKI PSFLSQNFRTH SVPNCLFAK+DPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDD SV
Subjt:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSGEDDDISV

Query:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
        PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSS VFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV
Subjt:  PSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAV

Query:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
        VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
Subjt:  VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA

A0A6J1KE02 uncharacterized protein LOC1114940102.5e-12297.41Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAMKKVALRDVQNDNRSVVYNYPETSCSLGGKLVNGSKVSGSKRSNPTCSPSSAIHQSFKGIGVNEHIIYANG
        MIDSKLN+GGMGSCETHLSMYKSKQSPIAMKKVALRDVQNDNRSVVYNYPETSCSLGGKLVNGSKVSGSKRSNPTCSP+SAIHQSFKGIGVNEHIIYANG
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAMKKVALRDVQNDNRSVVYNYPETSCSLGGKLVNGSKVSGSKRSNPTCSPSSAIHQSFKGIGVNEHIIYANG

Query:  EVDVKPGKKRALGGSTSCAPAFSSLAASPMAFSPVRSSLPIFTEKPGNFLAVAGSNLLGIHPGLEILHSVDSNGITDEQRTERLFNLQNLLKHCDESDQK
        EVDVKPGKKRALGGSTSCAP FSSLAASP+AFSPVRSSLPIFTEKPGNFLAV GSNLLGI PGLEILHSVDSNGITDEQRTERLFNLQNLLKHCDESDQK
Subjt:  EVDVKPGKKRALGGSTSCAPAFSSLAASPMAFSPVRSSLPIFTEKPGNFLAVAGSNLLGIHPGLEILHSVDSNGITDEQRTERLFNLQNLLKHCDESDQK

Query:  GFIELLHGLPPSELSRLAINLEKKSMHLSVEE
        GFIELLHGLPPSELSRLAINLEKKSMHLSVEE
Subjt:  GFIELLHGLPPSELSRLAINLEKKSMHLSVEE

SwissProt top hitse value%identityAlignment
A8GYB4 50S ribosomal protein L216.0e-1746.6Show/hide
Query:  VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGS-SRQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI
        +FAV++ G  Q+KV     I  E+++  ++  K+ LN+VL++G  S+ + +G P V  AVV A +     D K+I+FKKKRRKNYRR  GHRQELT+L+I
Subjt:  VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGS-SRQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI

Query:  IDI
        +DI
Subjt:  IDI

P24613 50S ribosomal protein L21, chloroplastic3.9e-2446.62Show/hide
Query:  PYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTK
        P E +FAVV IGS Q+ V  G  I+T+RLK   VNDK++LN+VLL+G+   T +G P V +A V AVVEE  LD KVI+FK K++KNYRR  GHRQ +T+
Subjt:  PYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTK

Query:  LRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA
        ++I  I G +        ++V  K   +    A
Subjt:  LRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA

P51412 50S ribosomal protein L21, chloroplastic4.7e-2241.18Show/hide
Query:  EKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAVVQAVVEEHALDA
        E E E   I   VV  +   +E     E +FAV+ +G  Q+ V  G  ++T+RLK  +V+D+++LN+VLL+G+   T +G+P V +A V AVVE   L+ 
Subjt:  EKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAVVQAVVEEHALDA

Query:  KVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDK
        KV++FK K +K YRR  GHRQ  T++RI  I G ++
Subjt:  KVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDK

Q1RGM7 50S ribosomal protein L216.0e-1746.6Show/hide
Query:  VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGS-SRQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI
        +FAV++ G  Q+KV     I  E+++  ++  K+ LN+VL++G  S+ + +G P V  AVV A +     D K+I+FKKKRRKNYRR  GHRQELT+L+I
Subjt:  VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGS-SRQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI

Query:  IDI
        +DI
Subjt:  IDI

Q8L9A0 50S ribosomal protein L21, mitochondrial1.4e-6154.85Show/hide
Query:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFR----THASV-PNCLFAKIDPSLCTNW--SHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSG
        MA+ RC + L+R A  +FS    I+  + + SF    F     +H +V PN    +  P   ++W  S  R  SS++++ +ED+++ E +D+D+E+   G
Subjt:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFR----THASV-PNCLFAKIDPSLCTNW--SHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSG

Query:  EDDDISVPSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGR
        ED + S     +++EY+  EK  EA  IGYKV+GP+  S  +FKPYEPVFA+VQIGSHQFKVSNGDSIFTE+LKFCD+NDKL L +VLLLGS+ QTI+GR
Subjt:  EDDDISVPSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGR

Query:  PTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPE--IIEKSSKVA
        P +P A V AVVEEHALD KV+IFKKKRRKNYRRT+GHRQELTKLRI DI+GI+KPE  I+ K SK A
Subjt:  PTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPE--IIEKSSKVA

Arabidopsis top hitse value%identityAlignment
AT1G35680.1 Ribosomal protein L213.4e-2341.18Show/hide
Query:  EKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAVVQAVVEEHALDA
        E E E   I   VV  +   +E     E +FAV+ +G  Q+ V  G  ++T+RLK  +V+D+++LN+VLL+G+   T +G+P V +A V AVVE   L+ 
Subjt:  EKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGRPTVPSAVVQAVVEEHALDA

Query:  KVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDK
        KV++FK K +K YRR  GHRQ  T++RI  I G ++
Subjt:  KVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDK

AT2G45250.1 Integral membrane protein hemolysin-III homolog1.6e-0442.31Show/hide
Query:  ERLFNLQNLLKHCDESDQKGFIELLHGLPPSELSRLAINLEKKSMHLSVEEA
        ER  +LQ LL   ++SD+   +++L  L  +ELS+ A++LEK+S+  S+EEA
Subjt:  ERLFNLQNLLKHCDESDQKGFIELLHGLPPSELSRLAINLEKKSMHLSVEEA

AT2G45250.2 Integral membrane protein hemolysin-III homolog4.6e-0441.18Show/hide
Query:  ERLFNLQNLLKHCDESDQKGFIELLHGLPPSELSRLAINLEKKSMHLSVEE
        ER  +LQ LL   ++SD+   +++L  L  +ELS+ A++LEK+S+  S+EE
Subjt:  ERLFNLQNLLKHCDESDQKGFIELLHGLPPSELSRLAINLEKKSMHLSVEE

AT4G30930.1 Ribosomal protein L219.7e-6354.85Show/hide
Query:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFR----THASV-PNCLFAKIDPSLCTNW--SHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSG
        MA+ RC + L+R A  +FS    I+  + + SF    F     +H +V PN    +  P   ++W  S  R  SS++++ +ED+++ E +D+D+E+   G
Subjt:  MANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFR----THASV-PNCLFAKIDPSLCTNW--SHSRYLSSDSQNGNEDDDTEEDDDEDDEDYDSG

Query:  EDDDISVPSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGR
        ED + S     +++EY+  EK  EA  IGYKV+GP+  S  +FKPYEPVFA+VQIGSHQFKVSNGDSIFTE+LKFCD+NDKL L +VLLLGS+ QTI+GR
Subjt:  EDDDISVPSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVGR

Query:  PTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPE--IIEKSSKVA
        P +P A V AVVEEHALD KV+IFKKKRRKNYRRT+GHRQELTKLRI DI+GI+KPE  I+ K SK A
Subjt:  PTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPE--IIEKSSKVA

AT4G38280.1 BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolysin-III homolog (TAIR:AT2G45250.1)1.6e-0442.31Show/hide
Query:  ERLFNLQNLLKHCDESDQKGFIELLHGLPPSELSRLAINLEKKSMHLSVEEA
        ER  +LQ LL   ++SD+   +++L  L  +ELS+ A++LEK+S+  S+EEA
Subjt:  ERLFNLQNLLKHCDESDQKGFIELLHGLPPSELSRLAINLEKKSMHLSVEEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATAGCAAGTTGAACAGCGGTGGGATGGGTAGCTGCGAAACTCATTTGTCTATGTATAAGAGCAAGCAGTCTCCAATTGCAATGAAAAAGGTTGCTTTAAGAGA
TGTGCAGAATGATAATAGGAGTGTCGTGTATAACTATCCTGAAACTTCCTGTTCTTTGGGCGGCAAACTTGTGAATGGGAGTAAGGTTTCAGGAAGTAAGAGATCCAACC
CGACATGCTCACCGAGCTCTGCAATCCATCAATCCTTCAAGGGGATTGGGGTAAATGAGCATATCATTTATGCCAACGGAGAAGTTGATGTGAAGCCTGGCAAAAAAAGA
GCATTGGGAGGTAGCACATCTTGTGCACCCGCATTTTCTTCTCTTGCAGCTTCTCCGATGGCGTTTTCACCTGTTAGGTCTTCACTTCCCATTTTCACAGAAAAGCCTGG
TAATTTTCTAGCAGTTGCTGGATCCAATCTTCTGGGAATCCATCCTGGTTTGGAGATTCTTCACTCTGTTGATTCAAATGGGATTACTGATGAGCAGAGAACAGAGCGTT
TATTCAATCTTCAGAATCTCCTAAAACATTGTGACGAGTCGGATCAAAAAGGCTTTATCGAGTTGCTCCATGGTTTACCTCCCTCTGAGCTCAGCAGACTTGCCATTAAT
CTGGAAAAGAAATCCATGCATCTGTCAGTAGAAGAAGCATGTGTAGGTGTTGTCTATAGATCCGAGGCCATTAGGATCACCACCATGGCGAACAGACGGTGTTTACAAGT
ACTAACTCGTCATGCCTTGGCCATCTTTTCCACCAAGCCATATATCCACTCCCTGAAGATCGTACCCTCCTTCCTTTCCCAGAATTTTCGTACACATGCTTCTGTACCAA
ACTGTCTATTTGCTAAAATCGATCCTTCTTTGTGTACCAACTGGTCACATTCCCGATATCTCTCATCTGATAGTCAGAATGGCAATGAAGATGATGATACTGAAGAAGAT
GATGATGAAGATGACGAGGATTATGATAGTGGTGAGGATGATGATATTTCAGTGCCGAGTAGGGGTATGCAAAAGGAGTATACAAAGGAGGAGAAGGAGGCAGAAGCAGC
TTCTATTGGATATAAAGTAGTTGGGCCAATTGATCGATCTAGTGAGGTTTTCAAGCCTTATGAACCTGTTTTTGCTGTCGTTCAGATTGGCTCACACCAATTCAAGGTTA
GCAACGGAGATAGTATTTTTACTGAGAGATTAAAATTCTGCGATGTGAATGACAAGTTGATATTGAATAGGGTTCTTTTGCTTGGCTCAAGTAGACAAACGATTGTCGGT
AGGCCTACAGTACCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCATTGGATGCAAAAGTAATCATCTTCAAGAAAAAAAGAAGGAAGAATTACCGTCGAACCAA
AGGACATCGCCAGGAATTAACGAAGTTGAGGATCATCGATATCGAAGGCATCGACAAACCAGAAATCATCGAGAAGTCTTCAAAAGTAGCTGGTAAGAATCCAAAACAAG
TTTCAGTAGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
TTTGAACTCGCCTCTCCCTCTCCCTTTCCCTCTCTCGTCGGTTGCAGAAGCCGAACAAGCTTCCTTCTCAGGAGATAATTTGAAATCGTTATTTGGTTGAAGCTCTTCAA
GTGTTCTAAATGATTGATAGCAAGTTGAACAGCGGTGGGATGGGTAGCTGCGAAACTCATTTGTCTATGTATAAGAGCAAGCAGTCTCCAATTGCAATGAAAAAGGTTGC
TTTAAGAGATGTGCAGAATGATAATAGGAGTGTCGTGTATAACTATCCTGAAACTTCCTGTTCTTTGGGCGGCAAACTTGTGAATGGGAGTAAGGTTTCAGGAAGTAAGA
GATCCAACCCGACATGCTCACCGAGCTCTGCAATCCATCAATCCTTCAAGGGGATTGGGGTAAATGAGCATATCATTTATGCCAACGGAGAAGTTGATGTGAAGCCTGGC
AAAAAAAGAGCATTGGGAGGTAGCACATCTTGTGCACCCGCATTTTCTTCTCTTGCAGCTTCTCCGATGGCGTTTTCACCTGTTAGGTCTTCACTTCCCATTTTCACAGA
AAAGCCTGGTAATTTTCTAGCAGTTGCTGGATCCAATCTTCTGGGAATCCATCCTGGTTTGGAGATTCTTCACTCTGTTGATTCAAATGGGATTACTGATGAGCAGAGAA
CAGAGCGTTTATTCAATCTTCAGAATCTCCTAAAACATTGTGACGAGTCGGATCAAAAAGGCTTTATCGAGTTGCTCCATGGTTTACCTCCCTCTGAGCTCAGCAGACTT
GCCATTAATCTGGAAAAGAAATCCATGCATCTGTCAGTAGAAGAAGCATGTGTAGGTGTTGTCTATAGATCCGAGGCCATTAGGATCACCACCATGGCGAACAGACGGTG
TTTACAAGTACTAACTCGTCATGCCTTGGCCATCTTTTCCACCAAGCCATATATCCACTCCCTGAAGATCGTACCCTCCTTCCTTTCCCAGAATTTTCGTACACATGCTT
CTGTACCAAACTGTCTATTTGCTAAAATCGATCCTTCTTTGTGTACCAACTGGTCACATTCCCGATATCTCTCATCTGATAGTCAGAATGGCAATGAAGATGATGATACT
GAAGAAGATGATGATGAAGATGACGAGGATTATGATAGTGGTGAGGATGATGATATTTCAGTGCCGAGTAGGGGTATGCAAAAGGAGTATACAAAGGAGGAGAAGGAGGC
AGAAGCAGCTTCTATTGGATATAAAGTAGTTGGGCCAATTGATCGATCTAGTGAGGTTTTCAAGCCTTATGAACCTGTTTTTGCTGTCGTTCAGATTGGCTCACACCAAT
TCAAGGTTAGCAACGGAGATAGTATTTTTACTGAGAGATTAAAATTCTGCGATGTGAATGACAAGTTGATATTGAATAGGGTTCTTTTGCTTGGCTCAAGTAGACAAACG
ATTGTCGGTAGGCCTACAGTACCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCATTGGATGCAAAAGTAATCATCTTCAAGAAAAAAAGAAGGAAGAATTACCG
TCGAACCAAAGGACATCGCCAGGAATTAACGAAGTTGAGGATCATCGATATCGAAGGCATCGACAAACCAGAAATCATCGAGAAGTCTTCAAAAGTAGCTGGTAAGAATC
CAAAACAAGTTTCAGTAGCTGCTTAGTAGAGAAGGCTGCATGATTCTAACTAGCTAGCTTGAATGACTTGATACCTCCTTAAGAGTGAGAGTCTATGCTCCCCAACTAGA
CATGTTTTGTAGGATGGCCGGCCACCATGCTTAGATACCCATTCCATTTCTTTCTTCCATTTCCTGCTAGTTTTCCCCTAAAATGTGATGTCTTCTATTTAAAAATAAAT
TTGAATTTGCTCATGAGAATTGCTGTCATTCATTTGAGAAGAGTTTGAAATTGCAATGACTATGTATGGTTGATCTTGATTTTCCTGTACTGAGATTTGGTATATTCATA
TTTGTTGGGAGATTGATTGCTTGCTGGATCATACATTCAATGCCATATGGTTTCTTTTTTTATTAAAATTTGCACAAGGG
Protein sequenceShow/hide protein sequence
MIDSKLNSGGMGSCETHLSMYKSKQSPIAMKKVALRDVQNDNRSVVYNYPETSCSLGGKLVNGSKVSGSKRSNPTCSPSSAIHQSFKGIGVNEHIIYANGEVDVKPGKKR
ALGGSTSCAPAFSSLAASPMAFSPVRSSLPIFTEKPGNFLAVAGSNLLGIHPGLEILHSVDSNGITDEQRTERLFNLQNLLKHCDESDQKGFIELLHGLPPSELSRLAIN
LEKKSMHLSVEEACVGVVYRSEAIRITTMANRRCLQVLTRHALAIFSTKPYIHSLKIVPSFLSQNFRTHASVPNCLFAKIDPSLCTNWSHSRYLSSDSQNGNEDDDTEED
DDEDDEDYDSGEDDDISVPSRGMQKEYTKEEKEAEAASIGYKVVGPIDRSSEVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLLLGSSRQTIVG
RPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIEGIDKPEIIEKSSKVAGKNPKQVSVAA