; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G010120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G010120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationCmo_Chr05:8147409..8150161
RNA-Seq ExpressionCmoCh05G010120
SyntenyCmoCh05G010120
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599112.1 hypothetical protein SDJN03_08890, partial [Cucurbita argyrosperma subsp. sororia]9.9e-6899.31Show/hide
Query:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL
        MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVD+VIFVIWELIILSFLVFSAVSL
Subjt:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL

Query:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
Subjt:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

XP_008464874.1 PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]7.6e-5282Show/hide
Query:  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV F+C C +  ILH   S    +K  SRG  +AMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        FSAVSLYFRHMQL F+LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

XP_022946845.1 uncharacterized protein LOC111450786 [Cucurbita moschata]7.6e-68100Show/hide
Query:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL
        MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL
Subjt:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL

Query:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
Subjt:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

XP_022999777.1 uncharacterized protein LOC111494024 [Cucurbita maxima]2.9e-6798.61Show/hide
Query:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL
        MLSLNSISQFLVPFICGCVKFPI HRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL
Subjt:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL

Query:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        YFRHMQLTFVL+CITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
Subjt:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

XP_038884232.1 uncharacterized protein LOC120075129 [Benincasa hispida]3.9e-5685.81Show/hide
Query:  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFS
        MLSLNSISQFLV F+C CVK  ILH RPS    +K  SRG+AMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLVFS
Subjt:  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFS

Query:  AVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        AVSLYFRHMQL F+LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  AVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

TrEMBL top hitse value%identityAlignment
A0A0A0KIH9 Uncharacterized protein6.3e-5282Show/hide
Query:  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV F+C C    ILH   S    +K  SRG  +AMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        FSAVSLYFRHMQL F+LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

A0A1S3CMK7 uncharacterized protein LOC103502637 isoform X13.7e-5282Show/hide
Query:  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV F+C C +  ILH   S    +K  SRG  +AMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        FSAVSLYFRHMQL F+LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

A0A6J1G568 uncharacterized protein LOC1114507863.7e-68100Show/hide
Query:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL
        MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL
Subjt:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL

Query:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
Subjt:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

A0A6J1GHS6 uncharacterized protein LOC1114542823.1e-5180.27Show/hide
Query:  LSLNSISQFLVPFICGCVKFPILHRRP----SEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSA
        LSLNSISQFL+ F+  C K   LHRRP    +++  SRGAAMITRSNLVEQLREYQIRSKH+WAS S FSS SNITSSRVDVVIFVIWELIIL+FLVFSA
Subjt:  LSLNSISQFLVPFICGCVKFPILHRRP----SEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSA

Query:  VSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        VSLYFRHMQL  +LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  VSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

A0A6J1KBR2 uncharacterized protein LOC1114940241.4e-6798.61Show/hide
Query:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL
        MLSLNSISQFLVPFICGCVKFPI HRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL
Subjt:  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSL

Query:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
        YFRHMQLTFVL+CITMLLIVCMKVTKQMRLARKKKRRMLLPLSM
Subjt:  YFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20460.1 unknown protein4.5e-4283.02Show/hide
Query:  MITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRM
        MITRSNL EQLREYQIRSKHDWAS SFFSSTSN +SSRVDVV+FVIWEL+IL+F VFSAVSLYF+ +QL F+LVC+T+LL++CMKVTKQ+RLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

AT1G76185.1 unknown protein5.5e-4079.25Show/hide
Query:  MITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRM
        MITRSNL EQLREYQIRSKHDWAS SFFSSTSN +SSRVDVV+FVIWEL++L+ +VFSAVSLYFR +QL F+L+C+T+LL++CMK+TKQ+R ARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCTCTCAATTCCATTTCTCAATTCCTCGTTCCATTCATCTGTGGCTGTGTTAAATTCCCCATTCTTCATCGTCGCCCTTCAGAGAAACCAACCTCTCGG
GGCGCAGCCATGATTACTCGATCGAATCTGGTTGAACAGTTGAGAGAATACCAGATTCGATCCAAGCACGACTGGGCTTCCGCCTCCTTCTTCTCCTCTACCTCT
AATATTACATCCTCCAGGGTGGATGTAGTCATTTTTGTAATATGGGAACTCATAATTCTATCCTTCTTGGTGTTTTCCGCAGTTTCTTTATATTTTCGACATATG
CAGTTGACTTTCGTTTTAGTATGCATAACGATGTTGTTGATTGTATGCATGAAAGTAACAAAGCAAATGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTT
CCATTGTCCATGTGA
mRNA sequenceShow/hide mRNA sequence
TGGGAGTGGGCCTGATGCAGAGCCGAACGTAATGGGCAAAGCGGATGAAAGGAGTATCACAAACAAATAAGAACCCAAATCAAGAGGTCCATTACATTTTGATTC
AGCACAGTCCAAATTTGAGGGACGGAATTGAATGGAATTTGGGGAAGAACAAGAAACGAAGAGGAAGAAGGCCAGAGAGGGAGAGGGGTTGGTTGTAGTAAGAGA
AGGTCCACGCAGCGCAACCTCAACCTGAACCACTGCGAATTCAACGCTCATGCTCTCTCTCAATTCCATTTCTCAATTCCTCGTTCCATTCATCTGTGGCTGTGT
TAAATTCCCCATTCTTCATCGTCGCCCTTCAGAGAAACCAACCTCTCGGGGCGCAGCCATGATTACTCGATCGAATCTGGTTGAACAGTTGAGAGAATACCAGAT
TCGATCCAAGCACGACTGGGCTTCCGCCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGGGTGGATGTAGTCATTTTTGTAATATGGGAACTCATAAT
TCTATCCTTCTTGGTGTTTTCCGCAGTTTCTTTATATTTTCGACATATGCAGTTGACTTTCGTTTTAGTATGCATAACGATGTTGTTGATTGTATGCATGAAAGT
AACAAAGCAAATGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGAAAAAAAACTGATAGTAGAAGGAGAGATATACTGAACCTTTT
TTTCTTTTTTGAAATGTTCTAAATGCCCTGAATTATATTCATGAAGAAATAGATTTGGTCCTTTCTCCTCCCCCTCATTCTCTGTTATATTGGGATCTGTAATCA
CCAGGGAAGCTGCTTTTATAAGAAAAATGAAAAGAAAAAAAAAATGAATGAGATTGATGTGGTTAGTTTAGAA
Protein sequenceShow/hide protein sequence
MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHM
QLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM