CuGenDBv2

Gene ID	CmoCh05G010200
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	CX9C domain-containing protein
Genome location	Cmo_Chr05:8217544..8218303
RNA-Seq Expression	CmoCh05G010200
Synteny	CmoCh05G010200
Gene Ontology terms	GO:0032543 - mitochondrial translation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR009069 - Cysteine alpha-hairpin motif superfamily IPR017264 - Ribosomal protein MRP10, mitochondrial IPR031731 - IMS import disulfide relay-system, CHCH-CHCH-like Cx9C

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008464883.1 PREDICTED: uncharacterized protein LOC103502643 [Cucumis melo]

1.4e-34

86.25

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAG+L+INPKKFG LSKPCMKEM+SFLNC++LN NNDEKCTRHKE+LNTCMDAQ+NRN+KPWGSINY LQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

XP_022157440.1 uncharacterized protein LOC111024138 [Momordica charantia]

6.6e-37

93.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTR+KE+LNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

XP_022157885.1 uncharacterized protein LOC111024495 isoform X1 [Momordica charantia]

6.6e-37

93.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTR+KE+LNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

XP_022946561.1 uncharacterized protein LOC111450585 [Cucurbita moschata]

1.1e-39

100

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

XP_022999786.1 uncharacterized protein LOC111494031 [Cucurbita maxima]

1.8e-39

98.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKE+LNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TA50 CX9C domain-containing protein

6.6e-35

86.25

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAG+L+INPKKFG LSKPCMKEM+SFLNC++LN NNDEKCTRHKE+LNTCMDAQ+NRN+KPWGSINY LQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

A0A6J1DU96 uncharacterized protein LOC111024495 isoform X1

3.2e-37

93.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTR+KE+LNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

A0A6J1DVQ0 uncharacterized protein LOC111024138

3.2e-37

93.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTR+KE+LNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

A0A6J1G420 uncharacterized protein LOC111450585

5.2e-40

100

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

A0A6J1KBS0 uncharacterized protein LOC111494031

8.9e-40

98.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKE+LNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G47278.1 unknown protein

1.4e-29

68.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAG LYINPKK G L+KPCMKEM+SFLNCMALN+  D+KC + K++L+ CM  QS+   K WG+INYHLQRL+RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

AT1G47278.2 unknown protein

1.4e-29

68.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
        MGRKAG LYINPKK G L+KPCMKEM+SFLNCMALN+  D+KC + K++L+ CM  QS+   K WG+INYHLQRL+RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

Sequences

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CDS sequence

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ATGGGTAGGAAAGCTGGTACTTTATACATCAACCCAAAGAAGTTCGGCACTCTTAGTAAACCTTGCATGAAGGAAATGATATCATTTCTCAATTGCATGGCTCTTAATCA
TAACAATGACGAGAAGTGCACCAGACATAAGGAAATTCTAAATACTTGCATGGATGCTCAGTCCAACCGAAACAGGAAGCCTTGGGGTAGCATTAATTACCACTTGCAGA
GGCTTAGCAGGGGAAGAAAGTAG

mRNA sequence

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Protein sequence

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MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK

CmoCh05G010200 (gene) of Cucurbita moschata (Rifu) v1 genome