; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G010410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G010410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTranslation initiation factor IF-3
Genome locationCmo_Chr05:8429131..8434276
RNA-Seq ExpressionCmoCh05G010410
SyntenyCmoCh05G010410
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599141.1 Translation initiation factor IF3-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.8e-14998.03Show/hide
Query:  MAGLSGRFPFKSISSQSSATATATTTT-----SSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSED
        MAGLSGRFPFKSISSQSSATATATTTT     SSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSK SED
Subjt:  MAGLSGRFPFKSISSQSSATATATTTT-----SSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSED

Query:  SLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYS
        SLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYS
Subjt:  SLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYS

Query:  VRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS
        VRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS
Subjt:  VRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS

Query:  SLSQK
        SLSQK
Subjt:  SLSQK

XP_022946541.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita moschata]1.8e-151100Show/hide
Query:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD
        MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD
Subjt:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD

Query:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
        VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
Subjt:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA

Query:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK
        AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK
Subjt:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK

XP_022999741.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita maxima]7.2e-14597Show/hide
Query:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD
        MAGLSGRFPFKSISSQSSATATA  TTSSSSSATPFRTSIFPLP PSSKSNA RFRLH+SNSLRLVSSPIRTSVFARYGGAPRSSGP GSKRSEDSLALD
Subjt:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD

Query:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
        VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
Subjt:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA

Query:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK
        AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA VE  EASSLSQK
Subjt:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK

XP_023547209.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo]2.9e-14697.67Show/hide
Query:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD
        MAGLSGRFPFKSISSQSSATATA  TTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGP GSKRSEDSLALD
Subjt:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD

Query:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
        VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
Subjt:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA

Query:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK
        AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA VE  EA SLSQK
Subjt:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]5.2e-11983.45Show/hide
Query:  MAGLSGRFPFKSISSQS-SATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRL-----VSSPIRTSVFARYGGAPRSSGPAGSKRSE
        MAGLSGRFPFK + SQS +AT T+    +SSSSATPFRTSI PLPL SSK+NAF+FRL  SNSLRL     VSSPIRTSVF+RYGGAPRSSGPA SKRS+
Subjt:  MAGLSGRFPFKSISSQS-SATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRL-----VSSPIRTSVFARYGGAPRSSGPAGSKRSE

Query:  DSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDY
        D   LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQHDY
Subjt:  DSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDY

Query:  SVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQE-PPKKKDKPAAVNEVSARV
        SVRLRAA+KFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QE PPKKKDKP AVNEVSA V
Subjt:  SVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQE-PPKKKDKPAAVNEVSARV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-39.9e-11679.67Show/hide
Query:  MAGLSGRFPFKSISSQSSATATATTTTS------SSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRL-----VSSPIRTSVFARYGGAPRSSGPAG
        MAGLSG FPFKS+ SQSSA AT T+++S      SSSS TPFRTS   LP+ SS SNAF+FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  
Subjt:  MAGLSGRFPFKSISSQSSATATATTTTS------SSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRL-----VSSPIRTSVFARYGGAPRSSGPAG

Query:  SKRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKI
        SKRS D + LD+S+I+S NVRLID +QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY I
Subjt:  SKRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKI

Query:  DQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV
        DQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVN VSA V
Subjt:  DQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV

A0A1S3BV82 Translation initiation factor IF-31.7e-11581.21Show/hide
Query:  MAGLSGRFPFKSISSQSSATATATT---TTSSSSSATPFRTSIFPLPLPSS-KSNAFRFRLHNSNSLRL-----VSSPIRTSVFARYGGAPRSSGPAGSK
        MAGLSG FPFKS+ SQSSA +T T+     +SSSS TPFRTS   LP+ SS  SNAF+ RLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SK
Subjt:  MAGLSGRFPFKSISSQSSATATATT---TTSSSSSATPFRTSIFPLPLPSS-KSNAFRFRLHNSNSLRL-----VSSPIRTSVFARYGGAPRSSGPAGSK

Query:  RSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQ
        RS D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQ
Subjt:  RSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQ

Query:  HDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV
        HDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSA V
Subjt:  HDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV

A0A6J1DYM5 Translation initiation factor IF-33.6e-11882.19Show/hide
Query:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSAT--PFRTSIFPLPLPSSKSNAFRFRLHNSNSLRL-VSSPIRTSVFARYGGAPRSSGPAGSKRSEDSL
        MAGL+ RFPFK + SQSSAT ++   +SSSS+A   PFRTSI PLPL SS+SNAF FRLHNSNSLRL VSSPIR SVFAR+GGAPRSSGPA SKRS+D  
Subjt:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSAT--PFRTSIFPLPLPSSKSNAFRFRLHNSNSLRL-VSSPIRTSVFARYGGAPRSSGPAGSKRSEDSL

Query:  ALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVR
         LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQHDYSVR
Subjt:  ALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVR

Query:  LRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV
        L+AA++FL+DGDKVKVIVNLKGRENEFR IAIEL++RFQ+E+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKD P A+NEVSA V
Subjt:  LRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV

A0A6J1G3Y5 Translation initiation factor IF-38.5e-152100Show/hide
Query:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD
        MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD
Subjt:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD

Query:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
        VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
Subjt:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA

Query:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK
        AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK
Subjt:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK

A0A6J1KDY9 Translation initiation factor IF-33.5e-14597Show/hide
Query:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD
        MAGLSGRFPFKSISSQSSATATA  TTSSSSSATPFRTSIFPLP PSSKSNA RFRLH+SNSLRLVSSPIRTSVFARYGGAPRSSGP GSKRSEDSLALD
Subjt:  MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALD

Query:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
        VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA
Subjt:  VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRA

Query:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK
        AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA VE  EASSLSQK
Subjt:  AKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK

SwissProt top hitse value%identityAlignment
B2IY66 Translation initiation factor IF-34.2e-3144.32Show/hide
Query:  KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKID
        KR+ D   ++   IR   +R+ID     +GI+P  +A+Q+AE+ ELDLV++S  ADPPV RIMDY KY+++ +KK RE +KK      D+KE+KM YKI+
Subjt:  KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKID

Query:  QHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEEL---GELATEEAKNFRDRNVFIVLAPNK
        +HDY+VR++ A++FL+DGDKVK  V  +GRE +   +A +L+KR   +L   GEL  ++A     RN+ ++++P K
Subjt:  QHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEEL---GELATEEAKNFRDRNVFIVLAPNK

O82234 Translation initiation factor IF3-2, chloroplastic2.9e-7259.93Show/hide
Query:  SATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIR----TSVFARYGGAPRSSGP---AGSKRSEDSLALDVSSIRSNNVR
        +A  T  T T SS        S+F +    SK  + R      +   L  SP R    T  F   GG  R SG       K +E   ALD+SSIRS  VR
Subjt:  SATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIR----TSVFARYGGAPRSSGP---AGSKRSEDSLALDVSSIRSNNVR

Query:  LIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDK
        LID QQNM+G+V K +A++MA+DAELDLV+LSPDADPPVV++MDYSKYRY+ QK+K++QQKK+  TRMDLKELKMGY IDQHDYSVRLRAA+KFLQDGDK
Subjt:  LIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDK

Query:  VKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA
        VKVIV++KGRENEFR IAIEL++RFQ E+GELATEE+KNFRDRN+FI+L PNK +++K QEPP +K K  A NE SA
Subjt:  VKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA

Q3MBH6 Translation initiation factor IF-31.6e-3043.1Show/hide
Query:  KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKID
        KR+ D   ++   IR   +R+ID   + +GI+   +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY+++ +KK RE +KK      D+KE+KM YKI+
Subjt:  KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKID

Query:  QHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELA-TEEAKNFRDRNVFIVLAPNK
        +HDY+VR++ A++FL+DGDKVK  V  +GRE +   +A +L+KR   +L      ++A     RN+ ++++P K
Subjt:  QHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELA-TEEAKNFRDRNVFIVLAPNK

Q8YNE3 Translation initiation factor IF-31.6e-3043.1Show/hide
Query:  KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKID
        KR+ D   ++   IR   +R+ID   + +GI+   +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY+++ +KK RE +KK      D+KE+KM YKI+
Subjt:  KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKID

Query:  QHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELA-TEEAKNFRDRNVFIVLAPNK
        +HDY+VR++ A++FL+DGDKVK  V  +GRE +   +A +L+KR   +L      ++A     RN+ ++++P K
Subjt:  QHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELA-TEEAKNFRDRNVFIVLAPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic1.3e-7568.44Show/hide
Query:  SVFARYGGAPRSSGPAGS----------KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDL
        ++  RYGG     G  GS          K SED  +LD+S+IRS  VRLID+QQNM+G+V K +A++ AEDAELDLV+LSPDADPPVVR+MDYSKYRY+ 
Subjt:  SVFARYGGAPRSSGPAGS----------KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDL

Query:  QKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPN
        QK+K+EQQKK+  TRMDLKELKMGY IDQHDYSVR+RAA+KFLQDGDKVKVIVN+KGRENEFR IAIEL++RFQ E+GEL TEE+KNFRDRN+FIVL PN
Subjt:  QKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPN

Query:  KAVLQKSQEPPKKKDKPAAVNEVSA
        K V++K QEPP KK K  A ++VSA
Subjt:  KAVLQKSQEPPKKKDKPAAVNEVSA

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein4.0e-0832.2Show/hide
Query:  IRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQK--KKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAA
        I  + VRL+ E+ + V  V   +A++ A++ + DLV +  DA PPV +I+ YS   Y   K  K+R + K++ A R D+KE++   KI+  D   +   A
Subjt:  IRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQK--KKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAA

Query:  KKFLQDGDKVKVIV---NLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKK------KD---KPAAVNEVSARV
         K ++ G +VK +      K +E E  K+ +EL+ RF   +G+ A  E+    DR   +V+     V      PPKK      KD   K A V E S + 
Subjt:  KKFLQDGDKVKVIV---NLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKK------KD---KPAAVNEVSARV

Query:  EVSEA
        + S+A
Subjt:  EVSEA

AT2G24060.1 Translation initiation factor 3 protein2.1e-7359.93Show/hide
Query:  SATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIR----TSVFARYGGAPRSSGP---AGSKRSEDSLALDVSSIRSNNVR
        +A  T  T T SS        S+F +    SK  + R      +   L  SP R    T  F   GG  R SG       K +E   ALD+SSIRS  VR
Subjt:  SATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIR----TSVFARYGGAPRSSGP---AGSKRSEDSLALDVSSIRSNNVR

Query:  LIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDK
        LID QQNM+G+V K +A++MA+DAELDLV+LSPDADPPVV++MDYSKYRY+ QK+K++QQKK+  TRMDLKELKMGY IDQHDYSVRLRAA+KFLQDGDK
Subjt:  LIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDK

Query:  VKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA
        VKVIV++KGRENEFR IAIEL++RFQ E+GELATEE+KNFRDRN+FI+L PNK +++K QEPP +K K  A NE SA
Subjt:  VKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA

AT4G30690.1 Translation initiation factor 3 protein8.9e-7768.44Show/hide
Query:  SVFARYGGAPRSSGPAGS----------KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDL
        ++  RYGG     G  GS          K SED  +LD+S+IRS  VRLID+QQNM+G+V K +A++ AEDAELDLV+LSPDADPPVVR+MDYSKYRY+ 
Subjt:  SVFARYGGAPRSSGPAGS----------KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDL

Query:  QKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPN
        QK+K+EQQKK+  TRMDLKELKMGY IDQHDYSVR+RAA+KFLQDGDKVKVIVN+KGRENEFR IAIEL++RFQ E+GEL TEE+KNFRDRN+FIVL PN
Subjt:  QKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPN

Query:  KAVLQKSQEPPKKKDKPAAVNEVSA
        K V++K QEPP KK K  A ++VSA
Subjt:  KAVLQKSQEPPKKKDKPAAVNEVSA

AT4G30690.2 Translation initiation factor 3 protein1.5e-6058.22Show/hide
Query:  SVFARYGGAPRSSGPAGS----------KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDL
        ++  RYGG     G  GS          K SED  +LD+S+IRS  VRLID+QQNM+G+V K +A++ AEDAELDLV+LSPDADPPVVR+MDYS      
Subjt:  SVFARYGGAPRSSGPAGS----------KRSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDL

Query:  QKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPN
                                Y IDQHDYSVR+RAA+KFLQDGDKVKVIVN+KGRENEFR IAIEL++RFQ E+GEL TEE+KNFRDRN+FIVL PN
Subjt:  QKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPN

Query:  KAVLQKSQEPPKKKDKPAAVNEVSA
        K V++K QEPP KK K  A ++VSA
Subjt:  KAVLQKSQEPPKKKDKPAAVNEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCTCCGGCCGCTTCCCTTTCAAATCTATCTCATCTCAATCCTCCGCCACCGCCACAGCCACCACCACCACCTCCTCCTCCTCCTCCGCCACTCCCTTTCG
AACCTCAATTTTCCCTCTACCCCTCCCCTCCTCCAAATCCAATGCCTTCAGATTCCGCCTTCACAACTCCAACTCTCTGCGTCTCGTTTCCTCTCCAATTCGTACTTCTG
TATTTGCTCGATACGGCGGCGCTCCTCGATCTTCAGGACCGGCGGGTTCTAAGCGCTCTGAAGATTCTCTTGCTCTCGATGTTTCCTCCATCAGGTCGAATAATGTGAGG
CTTATCGATGAACAGCAGAATATGGTTGGAATTGTGCCAAAGTCCCAGGCGATTCAAATGGCTGAGGATGCCGAACTCGATTTGGTTGTATTATCCCCTGATGCAGATCC
TCCGGTTGTCAGAATAATGGATTACAGTAAGTATAGGTACGATCTACAAAAGAAGAAACGAGAACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAGGAGCTTA
AAATGGGTTATAAAATTGACCAACATGATTACTCTGTTCGTTTGAGAGCTGCAAAGAAGTTTTTGCAAGATGGAGATAAGGTTAAAGTTATAGTGAACTTGAAGGGTCGT
GAAAACGAGTTCAGAAAAATAGCGATTGAGCTTGTCAAACGTTTCCAGGAAGAGCTCGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATGTATTTAT
TGTTCTAGCTCCTAACAAGGCTGTTCTTCAAAAGTCTCAAGAACCCCCGAAGAAAAAAGATAAACCTGCTGCAGTTAATGAAGTTTCTGCCCGTGTCGAAGTTTCGGAAG
CGTCGAGCTTAAGCCAAAAATAG
mRNA sequenceShow/hide mRNA sequence
GCCAAATTCACACCCTCCACTGCTCCCTTCCTCAGCTCAAACCTCTATGGCTGGGCTCTCCGGCCGCTTCCCTTTCAAATCTATCTCATCTCAATCCTCCGCCACCGCCA
CAGCCACCACCACCACCTCCTCCTCCTCCTCCGCCACTCCCTTTCGAACCTCAATTTTCCCTCTACCCCTCCCCTCCTCCAAATCCAATGCCTTCAGATTCCGCCTTCAC
AACTCCAACTCTCTGCGTCTCGTTTCCTCTCCAATTCGTACTTCTGTATTTGCTCGATACGGCGGCGCTCCTCGATCTTCAGGACCGGCGGGTTCTAAGCGCTCTGAAGA
TTCTCTTGCTCTCGATGTTTCCTCCATCAGGTCGAATAATGTGAGGCTTATCGATGAACAGCAGAATATGGTTGGAATTGTGCCAAAGTCCCAGGCGATTCAAATGGCTG
AGGATGCCGAACTCGATTTGGTTGTATTATCCCCTGATGCAGATCCTCCGGTTGTCAGAATAATGGATTACAGTAAGTATAGGTACGATCTACAAAAGAAGAAACGAGAA
CAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAGGAGCTTAAAATGGGTTATAAAATTGACCAACATGATTACTCTGTTCGTTTGAGAGCTGCAAAGAAGTTTTT
GCAAGATGGAGATAAGGTTAAAGTTATAGTGAACTTGAAGGGTCGTGAAAACGAGTTCAGAAAAATAGCGATTGAGCTTGTCAAACGTTTCCAGGAAGAGCTCGGGGAGC
TTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATGTATTTATTGTTCTAGCTCCTAACAAGGCTGTTCTTCAAAAGTCTCAAGAACCCCCGAAGAAAAAAGATAAA
CCTGCTGCAGTTAATGAAGTTTCTGCCCGTGTCGAAGTTTCGGAAGCGTCGAGCTTAAGCCAAAAATAGAAGGGTTAGTCACAACAATCTCAATCTACTTATAGCATATA
GAGATATTTGAGAGCTTAATGTATAATGTCCTGTTTAATCTTATGCACCAGATTGTTGTTCATCCTATTTTTTTAGAGGAATGTTTAGAAATCAGATGTGCTACTCATTC
TTTTGAAAAGCATCCATATCTCTGAGCTTACTTTTTAGTTTGCTCCAAACTTAGCTTTTAGTGCCTAAGAGGATAGTGAGAGTGATTATTAGCTATCATAGGTTGGCCGG
GACACCTTTCCGTGTTTAGAGAGTTGACCGCTCCAATTCTGAGGAAAAATCAGGGGTAGGGTCAACGATCACTCCTGTCACGGGCTGGCAAGAACTCAAGACAATTCCTG
TGAAACTCTTTCCTCTGTGTTTCTTGGGAATTTCTTCTCTTCGATGAAAAACTCTTTGGAGAGAATTTCCCTTCCTCG
Protein sequenceShow/hide protein sequence
MAGLSGRFPFKSISSQSSATATATTTTSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALDVSSIRSNNVR
LIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGR
ENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK