; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G010420 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G010420
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box protein SKIP1-like
Genome locationCmo_Chr05:8435146..8437034
RNA-Seq ExpressionCmoCh05G010420
SyntenyCmoCh05G010420
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599142.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]5.2e-17299.66Show/hide
Query:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
        MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
Subjt:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD

Query:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
        SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
Subjt:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE

Query:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
        AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATS+LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
Subjt:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI

XP_022946543.1 F-box protein SKIP1-like [Cucurbita moschata]1.4e-172100Show/hide
Query:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
        MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
Subjt:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD

Query:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
        SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
Subjt:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE

Query:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
        AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
Subjt:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI

XP_022999743.1 F-box protein SKIP1-like [Cucurbita maxima]1.4e-16997.99Show/hide
Query:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
        MAE SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDL+PRFDSTPTESPAWWSPQFE KIDSMLRSAVQWSLGSLSLIRIRHCSD
Subjt:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD

Query:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
        SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
Subjt:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE

Query:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
        AVAIAKFMPNLEHL+LCFSK+SAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATS+LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
Subjt:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI

XP_023545430.1 F-box protein SKIP1-like [Cucurbita pepo subsp. pepo]6.4e-17098.32Show/hide
Query:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
        MAEPSWAELTQECLTNIFSRLT EQRWRGPMLVCKLWLRAATDSSLFSHF+LEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
Subjt:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD

Query:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
        SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYL+ACPQDVDSE
Subjt:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE

Query:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
        AVAIAKFMPNLEHL+LCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATS+LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
Subjt:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]1.4e-15689.11Show/hide
Query:  MAEP-----SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCKLW RAATD SLFSHFDLEPRF+STPTESPAWWSP+FE KIDSMLRSAV WSLGSLSLIRI
Subjt:  MAEP-----SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRI

Query:  RHCSDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ
        RHCSDSSL  VAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIGKHCPNIKT+KRNFFN LDPSQ KGIVPD+YLN+CPQ
Subjt:  RHCSDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ

Query:  DVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFMPNLEHL+L FSKLSAKAL+LIC+GCP LK+LDLFGCVNLTSRDI NATS++ENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
Subjt:  DVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

TrEMBL top hitse value%identityAlignment
A0A1S3BUE6 F-box protein SKIP11.4e-15186.47Show/hide
Query:  MAEP-----SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCK W RAA D SLFSHFDLEPRF+S PTESPAWW P+FE KIDSMLRSAV+WSLGSLS+IR+
Subjt:  MAEP-----SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRI

Query:  RHCSDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ
        RHCSDSSL  VAQGCPNLEVLSIKSCANVTD SMAKIA GCQKL+EVDISYCHEISN+SL+LIG+HCPNIKTLKRN+FN LDPSQ KGIVPD+YL+ACPQ
Subjt:  RHCSDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ

Query:  DVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFM NLEHL+L FSKLSAKALT IC+GCPNLKYLDLFGCVNLTSRDI NATS+LENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5A7UJH9 F-box protein SKIP15.5e-15186.14Show/hide
Query:  MAEP-----SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCK W  AA D SLFSHFDLEPRF+S PTESPAWW P+FE KIDSMLRSAV+WSLGSLS+IR+
Subjt:  MAEP-----SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRI

Query:  RHCSDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ
        RHCSDSSL  VAQGCPNLEVLSIKSCANVTD SMAKIA GCQKL+EVDISYCHEISN+SL+LIG+HCPNIKTLKRN+FN LDPSQ KGIVPD+YL+ACPQ
Subjt:  RHCSDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ

Query:  DVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFM NLEHL+L FSKLSAKALT IC+GCPNLKYLDLFGCVNLTSRDI NATS+LENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5D3BD72 F-box protein SKIP11.4e-15186.47Show/hide
Query:  MAEP-----SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCK W RAA D SLFSHFDLEPRF+S PTESPAWW P+FE KIDSMLRSAV+WSLGSLS+IR+
Subjt:  MAEP-----SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRI

Query:  RHCSDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ
        RHCSDSSL  VAQGCPNLEVLSIKSCANVTD SMAKIA GCQKL+EVDISYCHEISN+SL+LIG+HCPNIKTLKRN+FN LDPSQ KGIVPD+YL+ACPQ
Subjt:  RHCSDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ

Query:  DVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFM NLEHL+L FSKLSAKALT IC+GCPNLKYLDLFGCVNLTSRDI NATS+LENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A6J1G461 F-box protein SKIP1-like6.7e-173100Show/hide
Query:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
        MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
Subjt:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD

Query:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
        SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
Subjt:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE

Query:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
        AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
Subjt:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI

A0A6J1KKL1 F-box protein SKIP1-like6.9e-17097.99Show/hide
Query:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD
        MAE SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDL+PRFDSTPTESPAWWSPQFE KIDSMLRSAVQWSLGSLSLIRIRHCSD
Subjt:  MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD

Query:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
        SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE
Subjt:  SSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSE

Query:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
        AVAIAKFMPNLEHL+LCFSK+SAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATS+LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
Subjt:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP11.2e-9158.11Show/hide
Query:  WAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQL
        W  L  E L NI SRLTI++ W GPM V K WL    D  L+S FDLEP FDS P ES   WSP+FE K+D MLRS V WS G L+ IR+RHCSD +L  
Subjt:  WAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQL

Query:  VAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVAIA
         A  CPNL+VL+I+S  NVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++CPN++ LKRN  +    S+  G VP  YL+ACPQD D+EA AI 
Subjt:  VAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVAIA

Query:  KFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI
        K M NLEHL++ FS+LS K L  IC+GCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Subjt:  KFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI

Q9M096 Putative F-box/LRR-repeat protein 195.2e-7451.94Show/hide
Query:  PSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSL
        P W+ELT+ECL +IFSRL+ EQRW GPMLV K W+ A  D +L + FDLE RF S P ES  WW+P+FE K+DS LRS V  S G L+ IRIRHC++ SL
Subjt:  PSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSL

Query:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVA
           A+ CPNLEVL IK+C NVTD SM KIA+ C  L+E+DISY + I++ SL  +G+ C N+K LKRN    L PS    + P  YL   P+  + EA  
Subjt:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVA

Query:  IAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENL-EIRKPNFYIPRSVFHTERYGHWR
        I K+M  L+HL++ +S L+A+ L  +CKGC NL+Y+DL GC++LT  DI   TS L+NL EI KP+F  P +V    R G+ R
Subjt:  IAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENL-EIRKPNFYIPRSVFHTERYGHWR

Q9M0U9 F-box protein SKIP193.7e-1931.43Show/hide
Query:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD-SSL
        +W EL  E  + I  RL   +       VC+ W R   D S++   D+    D              +  ++ M R AV  S G L  I I +      L
Subjt:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD-SSL

Query:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ-DVDSEAV
          +A    NL  L +  C+ +TD    + A+    L+E+++SYC   S  SL ++G+ C N+KTLK                    LN  PQ + D +A+
Subjt:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ-DVDSEAV

Query:  AIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL
        AIA+ MP L HLQLC + LS   L  I   C NL++LDL  C N+
Subjt:  AIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL

Q9S9V8 Putative F-box/LRR-repeat protein 95.5e-2331.98Show/hide
Query:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSS-L
        +WAEL  E  ++I  RL   +  +    VCK W R   D S++   D+  + +          S +    I+ +   AV  S G L  I I +  ++S L
Subjt:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSS-L

Query:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDV---DSE
          +A    NL  L +  CA V  R + + A+    L+E+DI+Y   I    L ++G+ CPN++TLK N                     C  DV   D  
Subjt:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDV---DSE

Query:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL
        A+AIA+ MP L HLQL  + LS   L  I +GCP+LK L L  C+N+
Subjt:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL

Q9S9V9 Putative F-box/LRR-repeat protein 235.0e-2433.2Show/hide
Query:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSL-
        +WAEL  +  ++I  RL   +  +    VCK W R   D S++   D++ R D             F+  ++SM R AV  S G L  I I +   + L 
Subjt:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSL-

Query:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVA
          +A    NL+ L +  C  +TD  +AK       L+ +++SYC   S  SL  IG+ CPN+KTLK N              P+   +      D  A A
Subjt:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVA

Query:  IAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL
        IA+ MP L HLQL  + L+ K L  I  GCP+L++LDL  C N+
Subjt:  IAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein2.6e-2031.43Show/hide
Query:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD-SSL
        +W EL  E  + I  RL   +       VC+ W R   D S++   D+    D              +  ++ M R AV  S G L  I I +      L
Subjt:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSD-SSL

Query:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ-DVDSEAV
          +A    NL  L +  C+ +TD    + A+    L+E+++SYC   S  SL ++G+ C N+KTLK                    LN  PQ + D +A+
Subjt:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQ-DVDSEAV

Query:  AIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL
        AIA+ MP L HLQLC + LS   L  I   C NL++LDL  C N+
Subjt:  AIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL

AT4G05497.1 RNI-like superfamily protein3.9e-2431.98Show/hide
Query:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSS-L
        +WAEL  E  ++I  RL   +  +    VCK W R   D S++   D+  + +          S +    I+ +   AV  S G L  I I +  ++S L
Subjt:  SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSS-L

Query:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDV---DSE
          +A    NL  L +  CA V  R + + A+    L+E+DI+Y   I    L ++G+ CPN++TLK N                     C  DV   D  
Subjt:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDV---DSE

Query:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL
        A+AIA+ MP L HLQL  + LS   L  I +GCP+LK L L  C+N+
Subjt:  AVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL

AT4G30640.1 RNI-like superfamily protein3.7e-7551.94Show/hide
Query:  PSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSL
        P W+ELT+ECL +IFSRL+ EQRW GPMLV K W+ A  D +L + FDLE RF S P ES  WW+P+FE K+DS LRS V  S G L+ IRIRHC++ SL
Subjt:  PSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSL

Query:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVA
           A+ CPNLEVL IK+C NVTD SM KIA+ C  L+E+DISY + I++ SL  +G+ C N+K LKRN    L PS    + P  YL   P+  + EA  
Subjt:  QLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVA

Query:  IAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENL-EIRKPNFYIPRSVFHTERYGHWR
        I K+M  L+HL++ +S L+A+ L  +CKGC NL+Y+DL GC++LT  DI   TS L+NL EI KP+F  P +V    R G+ R
Subjt:  IAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENL-EIRKPNFYIPRSVFHTERYGHWR

AT5G52480.1 RNI-like superfamily protein1.1e-1836.42Show/hide
Query:  DSMLRSAVQWSLGSLSLIRIRHC-SDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFN
        +++ R+AV  S G L  I I    SDS L  +A+   NL  L +  C+ +TD    +  +    L+E+++S    +S  S+ L G  CPN+KTL  N   
Subjt:  DSMLRSAVQWSLGSLSLIRIRHC-SDSSLQLVAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFN

Query:  TLDPSQQKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL
                      YL++   D D +A+AIA+ MP L HLQLC +KL+   L  I  GCP+L++LDL  C+NL
Subjt:  TLDPSQQKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNL

AT5G57900.1 SKP1 interacting partner 18.8e-9358.11Show/hide
Query:  WAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQL
        W  L  E L NI SRLTI++ W GPM V K WL    D  L+S FDLEP FDS P ES   WSP+FE K+D MLRS V WS G L+ IR+RHCSD +L  
Subjt:  WAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQL

Query:  VAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVAIA
         A  CPNL+VL+I+S  NVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++CPN++ LKRN  +    S+  G VP  YL+ACPQD D+EA AI 
Subjt:  VAQGCPNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVAIA

Query:  KFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI
        K M NLEHL++ FS+LS K L  IC+GCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Subjt:  KFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCGTCGTGGGCGGAGCTGACGCAGGAGTGCCTAACCAACATCTTCTCTCGGCTAACCATCGAGCAGCGGTGGCGTGGACCCATGCTTGTCTGCAAGCTCTG
GCTCCGCGCCGCCACCGACTCCTCTCTCTTTTCCCACTTCGACCTCGAACCCAGGTTCGACTCCACCCCCACCGAGTCCCCAGCCTGGTGGTCGCCCCAATTCGAGGCCA
AAATTGATTCCATGCTCCGATCTGCCGTCCAATGGAGCCTTGGATCTCTTTCCCTTATTCGGATCAGACACTGCTCCGATTCATCTCTCCAATTGGTCGCTCAAGGGTGT
CCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCAGGAAGTAGATATCAGCTACTG
TCATGAAATCTCGAACGTATCTTTGTCGTTAATCGGCAAGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTCAACACACTAGATCCTTCCCAACAAAAAGGAA
TTGTCCCCGACAGTTATCTAAATGCTTGCCCACAAGATGTGGATTCAGAAGCTGTGGCTATTGCAAAATTCATGCCCAACTTGGAGCACCTGCAACTCTGTTTCTCTAAA
CTCTCTGCTAAAGCTCTAACTTTGATCTGTAAAGGATGTCCAAATCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGTCGTGATATCGTGAATGCTACGTC
GAATCTGGAGAATTTGGAGATTAGGAAACCGAATTTCTATATTCCGAGGTCGGTCTTTCACACCGAGAGGTATGGCCATTGGAGGTTATACGACGAGAGATTCCAAACAG
ATATTTTCCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
CTCTTTTATTATCCTCATAGCTTTCTGTATTCCTAAATTCCTAAGGTCACCCAAGAAATGGCAGAGCCGTCGTGGGCGGAGCTGACGCAGGAGTGCCTAACCAACATCTT
CTCTCGGCTAACCATCGAGCAGCGGTGGCGTGGACCCATGCTTGTCTGCAAGCTCTGGCTCCGCGCCGCCACCGACTCCTCTCTCTTTTCCCACTTCGACCTCGAACCCA
GGTTCGACTCCACCCCCACCGAGTCCCCAGCCTGGTGGTCGCCCCAATTCGAGGCCAAAATTGATTCCATGCTCCGATCTGCCGTCCAATGGAGCCTTGGATCTCTTTCC
CTTATTCGGATCAGACACTGCTCCGATTCATCTCTCCAATTGGTCGCTCAAGGGTGTCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGATC
AATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCAGGAAGTAGATATCAGCTACTGTCATGAAATCTCGAACGTATCTTTGTCGTTAATCGGCAAGCATTGTCCAAATA
TCAAGACTCTAAAACGAAACTTTTTCAACACACTAGATCCTTCCCAACAAAAAGGAATTGTCCCCGACAGTTATCTAAATGCTTGCCCACAAGATGTGGATTCAGAAGCT
GTGGCTATTGCAAAATTCATGCCCAACTTGGAGCACCTGCAACTCTGTTTCTCTAAACTCTCTGCTAAAGCTCTAACTTTGATCTGTAAAGGATGTCCAAATCTCAAGTA
CTTGGATCTGTTTGGGTGTGTGAACTTGACAAGTCGTGATATCGTGAATGCTACGTCGAATCTGGAGAATTTGGAGATTAGGAAACCGAATTTCTATATTCCGAGGTCGG
TCTTTCACACCGAGAGGTATGGCCATTGGAGGTTATACGACGAGAGATTCCAAACAGATATTTTCCGAATTTGATGGAGGTTACAGTCAAATGCAGGGTTAATACTCTCC
TAATTCAATGTGTATCAGTGTTGTTTTACTAAGTTGTACAGTTCTTAATTTAGCTGTTCTGTTTCATGACAGTCCCAAATCTGTACTCTCTTTTGAATTTGTATGGTGGC
TTGATGCGACATAAGGTTTGTATAACTTATAGTTAACAGCAAATGGGTTTCAGGTTTAACCTTGTACATCCCTTCATGTTATTGTTTCCAAGATTGTTGGAACCATTTTT
CTCTGTTCCTCTGAAACTCTTATCTCTCTCCATCAATATCACTGCTC
Protein sequenceShow/hide protein sequence
MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGC
PNLEVLSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSK
LSAKALTLICKGCPNLKYLDLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI