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CmoCh05G010430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G010430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLow temperature and salt responsive protein family
Genome locationCmo_Chr05:8438524..8439275
RNA-Seq ExpressionCmoCh05G010430
SyntenyCmoCh05G010430
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452728.1 PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]1.0e-2873.68Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASA
        M NGCEICCEILIAILIPPLGVCLK GCCT                  VEFCLCLILTLLGY+PGIIYA+YAI +VDRDQFFDEYRRPLYS ASA
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASA

XP_011648896.1 UPF0057 membrane protein At4g30660 [Cucumis sativus]3.0e-2872.63Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASA
        M NGCEICCEILIAILIPPLGVCLK GCCT                  VEFCLCLILTLLGY+PGIIYA+YAI +VDRDQFFDEYRRPLYS  SA
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASA

XP_022158160.1 UPF0057 membrane protein At2g24040-like [Momordica charantia]1.1e-3076.04Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV
        MANGCEICCEILIAILIPPLGVCLKHGCCT                  VEFCLCLILTLLGY+PGIIYALYAIV+VDRDQFFDEYRRPLY+  SAV
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV

XP_022946545.1 UPF0057 membrane protein At2g24040-like [Cucurbita moschata]9.0e-3381.25Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV
        MANGCEICCEILIAILIPPLGVCLKHGCCT                  VEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV

XP_038890692.1 UPF0057 membrane protein At4g30660-like [Benincasa hispida]9.3e-3076.04Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV
        MANGCEICCEILIAILIPPLGVCLK GCCT                  VEFCLCLILTLLGYIPGIIYALYAIV+VDRDQFFDEYRRPLY+ AS V
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV

TrEMBL top hitse value%identityAlignment
A0A1S3BTY7 UPF0057 membrane protein At4g306605.0e-2973.68Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASA
        M NGCEICCEILIAILIPPLGVCLK GCCT                  VEFCLCLILTLLGY+PGIIYA+YAI +VDRDQFFDEYRRPLYS ASA
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASA

A0A5A7UJR3 UPF0057 membrane protein5.0e-2973.68Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASA
        M NGCEICCEILIAILIPPLGVCLK GCCT                  VEFCLCLILTLLGY+PGIIYA+YAI +VDRDQFFDEYRRPLYS ASA
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASA

A0A6J1DV17 UPF0057 membrane protein At2g24040-like5.3e-3176.04Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV
        MANGCEICCEILIAILIPPLGVCLKHGCCT                  VEFCLCLILTLLGY+PGIIYALYAIV+VDRDQFFDEYRRPLY+  SAV
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV

A0A6J1G463 UPF0057 membrane protein At2g24040-like4.4e-3381.25Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV
        MANGCEICCEILIAILIPPLGVCLKHGCCT                  VEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV

A0A6J1KI35 UPF0057 membrane protein At2g24040-like4.4e-3381.25Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV
        MANGCEICCEILIAILIPPLGVCLKHGCCT                  VEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B1.8e-0750Show/hide
Query:  GCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAI
        G   C +ILIAI++PPLGV LK GC                     EF +CL+LT LGYIPGIIYA+YAI
Subjt:  GCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAI

O82232 UPF0057 membrane protein At2g240407.9e-2458.89Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLY
        MA+ CE+CCEI IAIL+PP+GVCL+HGCCT                  VEF +CLILT LGY+PGIIYA+YAI ++ RD++FDEYRRP+Y
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLY

Q9LRI7 Hydrophobic protein OSR81.1e-1247.67Show/hide
Query:  MANG-CEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEY
        MA+G C    EIL+AI++PPLGV L+ GCC+                  +EFC+CL+LT+LGY+PGIIYA+Y +V +D DQ+  EY
Subjt:  MANG-CEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEY

Q9M095 UPF0057 membrane protein At4g306508.0e-1656.96Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRD
        MA+  E+ CEILIAIL+PPLGVCLK GCCT                  VEF +CL+LT+LGYIPGIIYALY IV+ +R+
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRD

Q9SUI0 UPF0057 membrane protein At4g306609.7e-2254.95Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYS
        M + CEI CEI+IAIL+PPLGVC + GCCT                  VEF +CL+LT+LGY+PGIIYA+Y IV+  R+++FDEYRRP+YS
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYS

Arabidopsis top hitse value%identityAlignment
AT2G24040.1 Low temperature and salt responsive protein family5.6e-2558.89Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLY
        MA+ CE+CCEI IAIL+PP+GVCL+HGCCT                  VEF +CLILT LGY+PGIIYA+YAI ++ RD++FDEYRRP+Y
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLY

AT4G28088.1 Low temperature and salt responsive protein family1.5e-3072.22Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLY
        MANGCEICCEI+IAILIPPLGVCL+HGCCT                   EF +CLILTLLGY+PGIIYALYAIVYVDRDQFFDEYRRPL+
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLY

AT4G30650.1 Low temperature and salt responsive protein family5.7e-1756.96Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRD
        MA+  E+ CEILIAIL+PPLGVCLK GCCT                  VEF +CL+LT+LGYIPGIIYALY IV+ +R+
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRD

AT4G30660.1 Low temperature and salt responsive protein family6.9e-2354.95Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYS
        M + CEI CEI+IAIL+PPLGVC + GCCT                  VEF +CL+LT+LGY+PGIIYA+Y IV+  R+++FDEYRRP+YS
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYS

AT4G30660.2 Low temperature and salt responsive protein family6.9e-2354.95Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYS
        M + CEI CEI+IAIL+PPLGVC + GCCT                  VEF +CL+LT+LGY+PGIIYA+Y IV+  R+++FDEYRRP+YS
Subjt:  MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTAAAGCACGGCTGTTGCACGGTAATCTTACTTCTTCTTCA
ATCTCTCTGTAATTTCCCCCAATCTGAACTCCTGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTCGGTTACATTCCGGGGATCATCTACGCACTCTACGCCATCG
TCTACGTCGATCGCGACCAGTTCTTCGACGAGTACAGGCGTCCGCTCTATTCTCAGGCGTCGGCGGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTAAAGCACGGCTGTTGCACGGTAATCTTACTTCTTCTTCA
ATCTCTCTGTAATTTCCCCCAATCTGAACTCCTGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTCGGTTACATTCCGGGGATCATCTACGCACTCTACGCCATCG
TCTACGTCGATCGCGACCAGTTCTTCGACGAGTACAGGCGTCCGCTCTATTCTCAGGCGTCGGCGGTATAGAAACCGGTTTGAATCTCTTCAACTCTGTGTTTAGCCTTT
TTCGAATAAGGTTGTTAAACTTTTGGATTGGATTTCATCTACATAGATTTGTTCAACTTTCTGTTTCTTGATTCGGTTGGATTTAGATTTTGTTGAGACACTGTATGGAT
GTGTGGTCATGAACTTAGACCTAAGATGTTTGGAATAATTTGGATGGCGATGAATGTTGAAACAAATCGGGACTGATGAAATGTCGGCAATGGCGTTTTGAGGTGCCTTT
GCGTAGAAATAAATAGTTGAGGCGTCCTTAAAACCTTCATAATTTTGAAATTGCTTTAAAAAATAAAATAAAATAAGAAATTACAAAAGAAG
Protein sequenceShow/hide protein sequence
MANGCEICCEILIAILIPPLGVCLKHGCCTVILLLLQSLCNFPQSELLVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV