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CmoCh05G010590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G010590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description26S proteasome non-ATPase regulatory subunit 9
Genome locationCmo_Chr05:8539728..8543872
RNA-Seq ExpressionCmoCh05G010590
SyntenyCmoCh05G010590
Gene Ontology termsGO:0070682 - proteasome regulatory particle assembly (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR035269 - 26S Proteasome non-ATPase regulatory subunit 9
IPR036034 - PDZ superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022946921.1 26S proteasome non-ATPase regulatory subunit 9-like isoform X1 [Cucurbita moschata]4.9e-47100Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

XP_022946922.1 probable 26S proteasome regulatory subunit p27 isoform X2 [Cucurbita moschata]4.9e-47100Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

XP_022999762.1 26S proteasome non-ATPase regulatory subunit 9-like isoform X1 [Cucurbita maxima]3.2e-4698.95Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

XP_022999763.1 26S proteasome non-ATPase regulatory subunit 9-like isoform X2 [Cucurbita maxima]3.2e-4698.95Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

XP_023545321.1 26S proteasome non-ATPase regulatory subunit 9-like [Cucurbita pepo subsp. pepo]3.2e-4698.95Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

TrEMBL top hitse value%identityAlignment
A0A0A0LGM6 Nas2_N domain-containing protein8.7e-4291.58Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANG IPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD LL RLASEAQ+NQGR IPVVV RHGTPVNLTVTPRSW GRGLLGCHFRM+
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

A0A6J1G4X8 26S proteasome non-ATPase regulatory subunit 9-like isoform X12.4e-47100Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

A0A6J1G4Y3 probable 26S proteasome regulatory subunit p27 isoform X22.4e-47100Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

A0A6J1KBP8 26S proteasome non-ATPase regulatory subunit 9-like isoform X11.5e-4698.95Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

A0A6J1KKM4 26S proteasome non-ATPase regulatory subunit 9-like isoform X21.5e-4698.95Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

SwissProt top hitse value%identityAlignment
O00233 26S proteasome non-ATPase regulatory subunit 97.6e-1140.24Show/hide
Query:  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCH
        FA V+ I+  SPA+  GLQ+ D++++FG+V   +   LH + S  Q ++G+P+ V V R G    L + P  W G+GLLGC+
Subjt:  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCH

P40555 Probable 26S proteasome regulatory subunit p272.9e-1034.83Show/hide
Query:  IPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD-VLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTP-RSWHGRGLLGCHFRML
        IPFA + E+   SP+    +++ D+++  GNV   +   L  +      N+ RP+PV++ R G  +  ++TP R+W+GRGLLGC  + L
Subjt:  IPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD-VLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTP-RSWHGRGLLGCHFRML

Q3SZ19 26S proteasome non-ATPase regulatory subunit 92.9e-1040.24Show/hide
Query:  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCH
        FA V+ I+  SPA+  GLQ+ D++L+FG+V   +   L  + S  Q ++G+P+ V V R G    L + P  W G+GLLGC+
Subjt:  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCH

Q9CR00 26S proteasome non-ATPase regulatory subunit 95.5e-0936.59Show/hide
Query:  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCH
        FA V+ I+  SPA+  GLQ+ D++++FG+V   +   +  + +  Q ++G+P+ V V R G    L + P  W G+GLLGC+
Subjt:  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCH

Q9WTV5 26S proteasome non-ATPase regulatory subunit 92.2e-1038.37Show/hide
Query:  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        FA V+ I+  SPA+  GLQ+ D++++FG+V   +   L  + +  Q ++G+P+ V+V R G    L +TP  W G+GLLGC+   L
Subjt:  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML

Arabidopsis top hitse value%identityAlignment
AT5G57950.1 26S proteasome regulatory subunit, putative1.2e-3269.47Show/hide
Query:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML
        MD+D    IPFA+VDEI ++SPAA+ GLQLGDQVLKFGNVEGGD LL RLA+EAQSNQG+ + V V R G  V L+VTPR W GRGLLGCHFR++
Subjt:  MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATAGATGCAAATGGAGGTATACCTTTTGCACTGGTTGACGAAATAGCCGATGCATCGCCAGCAGCAGATGATGGATTACAACTAGGCGATCAAGTTCTTAAATT
TGGGAATGTAGAAGGCGGTGATGTTCTGTTGCATAGGCTTGCCTCTGAAGCACAGAGTAATCAAGGTCGTCCAATACCTGTTGTGGTTACGAGGCATGGTACTCCAGTCA
ATTTAACCGTGACACCCAGATCATGGCATGGCCGGGGTCTCCTTGGATGCCATTTTCGGATGTTGTAG
mRNA sequenceShow/hide mRNA sequence
TGTTTCAATTCCATTTTGAAAGCTTTGGATCGGGAAAAATGGTGGCTTCCAATTTGAAGTCGGAGACTATGGATCTGATGCAGAAGAGGAGCGCTATCGAGGCCCAGATG
GATGCCATCATTTCGCGCCTTTGTCAGCCTGGAGGTCCTGGACTCTCTGGAAATCTCGTCGACTCTGAGGTGTATAAAGATTTGAATCAAAATGTGGAATTTATTCTTAT
TTCTGTTGTTTCCCATAGTGAGATATTACTTCTGAGTTCTGAATGCCTCTAGCTGAGAAATGACCATACGGAGATCACTGAAAAGATTAATCAGAACATACAAATTTTGC
ATTCTGCAAAGCCTGCTTCGAGCTTGGCACTCTCTAAGGATGCAGGTAATTGGAATACAGAGGTTTCAAATGGCCAAAGGTCATCTGTCACAACTGTTGCAGTACCATCC
TCAAATGTATCGTCCACTGCAATGGACATAGATGCAAATGGAGGTATACCTTTTGCACTGGTTGACGAAATAGCCGATGCATCGCCAGCAGCAGATGATGGATTACAACT
AGGCGATCAAGTTCTTAAATTTGGGAATGTAGAAGGCGGTGATGTTCTGTTGCATAGGCTTGCCTCTGAAGCACAGAGTAATCAAGGTCGTCCAATACCTGTTGTGGTTA
CGAGGCATGGTACTCCAGTCAATTTAACCGTGACACCCAGATCATGGCATGGCCGGGGTCTCCTTGGATGCCATTTTCGGATGTTGTAGCTGGCTCTAACCACAATTTCA
ACCTGTCCCTGGTGGCTGTTGATAAAAACAGTAACCATTTCTGCTCAACTCTCATGTTCTACACTCAATCTACTGGTTTAATTCTAGGTTCCACGTGTTTGACTGGTTTT
ATAATCCAATTATTGCCCACACTGCCCTTTTTTTTTTTTGTCATTTTGCATAGATTTTCTGTAAATTGAAACAATAGGATAAGTTGCAGTTTTATGCTATTTTAGTGGTG
TACTTCTTATGATGTCAATCTTTACTGTTTCTTGTTGCTTTGTGTGTAAAGTTACTTCAGAAGACATGATACTTTTCTTGAGAACATCATTTTGTTAATGGAATCAAAGG
ACTTTTAGCTTA
Protein sequenceShow/hide protein sequence
MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML