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CmoCh05G010700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G010700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein NIM1-INTERACTING 3-like
Genome locationCmo_Chr05:8624611..8625024
RNA-Seq ExpressionCmoCh05G010700
SyntenyCmoCh05G010700
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599168.1 hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5693.71Show/hide
Query:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA
        MEGGRKRRKLQNIEEDDDD   EEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA
Subjt:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA

Query:  SSSATKQSNQKE------EHQEHQEHQEQLEEPKKGLDLNLSL
        SSSATKQSNQKE      EHQEHQEHQEQLEEPKKGLDLNLSL
Subjt:  SSSATKQSNQKE------EHQEHQEHQEQLEEPKKGLDLNLSL

KGN61024.1 hypothetical protein Csa_021295 [Cucumis sativus]1.9e-2051.45Show/hide
Query:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDF-IEDGFDTHKSKSKAAIELGA
        ME GRKRRKLQ               E+E+E+E+EKM+LF+ALIQNTKAMRD +K  +   E+  +KGVWNPKFQPEDF  EDG++ +   +   ++L A
Subjt:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDF-IEDGFDTHKSKSKAAIELGA

Query:  ASSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL
        ASSS TKQ N+K++ +E + +  ++ E KKGLDLNLSL
Subjt:  ASSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL

XP_038889660.1 protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida]2.5e-2059.66Show/hide
Query:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA
        ME GRKRRKL             EE+E+ED+DEE +MKL FALIQN KAMR ++KSKES EE+  +KGVWNPKFQPEDFIEDG+  + +KS   ++L AA
Subjt:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA

Query:  SSSATKQSNQKEEHQEHQE
        SSS TK SN K+E QE Q+
Subjt:  SSSATKQSNQKEEHQEHQE

XP_038889661.1 protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida]3.3e-2058.73Show/hide
Query:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA
        ME GRKRRKL             EE+E+ED+DEE +MKL FALIQN KAMR ++KSKES EE+  +KGVWNPKFQPEDFIEDG+  + +KS   ++L AA
Subjt:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA

Query:  SSSATKQSNQKEEHQEHQE-HQEQLE
        SSS TK SN K+E QE Q+ H+  LE
Subjt:  SSSATKQSNQKEEHQEHQE-HQEQLE

XP_038889662.1 protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida]2.5e-2059.66Show/hide
Query:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA
        ME GRKRRKL             EE+E+ED+DEE +MKL FALIQN KAMR ++KSKES EE+  +KGVWNPKFQPEDFIEDG+  + +KS   ++L AA
Subjt:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA

Query:  SSSATKQSNQKEEHQEHQE
        SSS TK SN K+E QE Q+
Subjt:  SSSATKQSNQKEEHQEHQE

TrEMBL top hitse value%identityAlignment
A0A061F4Z3 Uncharacterized protein4.6e-1244.52Show/hide
Query:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIK-----SKESAE----EDNPTKGVWNPKFQPEDFIEDGFDTHKSKS
        ME GRK+RK+ N EE++DD  EEEE+ED++E+EEEK++ FFALI++T+ MRD+++     SKE  E    E+     VWNPKFQPEDF+ED      SK 
Subjt:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIK-----SKESAE----EDNPTKGVWNPKFQPEDFIEDGFDTHKSKS

Query:  KAAIELGAASSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL
        K  + +  A  S+ ++  Q ++ +E  E          GLDL LSL
Subjt:  KAAIELGAASSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL

A0A0A0LJ23 Uncharacterized protein9.3e-2151.45Show/hide
Query:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDF-IEDGFDTHKSKSKAAIELGA
        ME GRKRRKLQ               E+E+E+E+EKM+LF+ALIQNTKAMRD +K  +   E+  +KGVWNPKFQPEDF  EDG++ +   +   ++L A
Subjt:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDF-IEDGFDTHKSKSKAAIELGA

Query:  ASSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL
        ASSS TKQ N+K++ +E + +  ++ E KKGLDLNLSL
Subjt:  ASSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL

A0A5C7GWM2 Uncharacterized protein1.5e-0734.1Show/hide
Query:  RKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKS-------------------------------KESAEEDNPTKGVWNPK
        RK+RK++N            E+E+E+E+EEEKM+ F+AL++NTK +RD+++S                               K+   E+     VWNP 
Subjt:  RKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKS-------------------------------KESAEEDNPTKGVWNPK

Query:  FQPEDFIEDGFDTHKSKSKAAIELGAASSSATKQSNQKEEHQEHQEHQEQLEEPKK---------GLDLNLSL
        FQPEDF+ED     KS +   + LG+ SS+    S  +E+++E Q+ Q+Q E+ KK          LDLNLSL
Subjt:  FQPEDFIEDGFDTHKSKSKAAIELGAASSSATKQSNQKEEHQEHQEHQEQLEEPKK---------GLDLNLSL

A0A6J1DQG7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110232847.4e-1851.82Show/hide
Query:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA
        ME  R++RKLQ         ++E+E + EDE+EEEKMKLFFALIQNTK++RD++KSK+SA + + +KGVWNPKFQPEDFIED       KS    +   A
Subjt:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAA

Query:  SSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL
        +SS+TKQ N++EE ++ ++  E +E+    LDLNLSL
Subjt:  SSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL

A0A6P9EP42 protein NIM1-INTERACTING 1-like6.9e-0840Show/hide
Query:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIK-------SKESAEE----DNPTKG--VWNPKFQPEDFIEDGFDTH
        MEG RK+RK+           E EE ED+++DEE+K++ FF LI++T+ +RD+++       SK+  EE    +   KG  VWNP FQPEDFI+D   + 
Subjt:  MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIK-------SKESAEE----DNPTKG--VWNPKFQPEDFIEDGFDTH

Query:  KSKSKAAIELGAASSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL
        KS S  A +    S S TK +         +E Q++ E+   GLDLNLSL
Subjt:  KSKSKAAIELGAASSSATKQSNQKEEHQEHQEHQEQLEEPKKGLDLNLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGGAAGAAAGAGAAGAAAATTGCAGAACATTGAAGAAGATGATGATGATGATGAAGAAGAAGAAGAAGATGAAGATGAAGATGAAGATGAAGAGGAAAAAAT
GAAGCTGTTCTTCGCTCTAATTCAAAACACCAAAGCAATGAGAGACAAAATCAAATCAAAAGAATCAGCTGAAGAAGATAACCCAACAAAAGGGGTTTGGAATCCAAAGT
TCCAACCAGAAGATTTCATTGAAGATGGGTTTGATACCCACAAATCCAAATCAAAAGCCGCCATTGAATTAGGAGCTGCTTCATCTTCAGCTACAAAACAGAGCAACCAA
AAGGAAGAACACCAAGAACATCAAGAACACCAAGAACAGCTAGAAGAACCAAAAAAGGGGCTCGATCTTAATCTCTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAGGAAGAAAGAGAAGAAAATTGCAGAACATTGAAGAAGATGATGATGATGATGAAGAAGAAGAAGAAGATGAAGATGAAGATGAAGATGAAGAGGAAAAAAT
GAAGCTGTTCTTCGCTCTAATTCAAAACACCAAAGCAATGAGAGACAAAATCAAATCAAAAGAATCAGCTGAAGAAGATAACCCAACAAAAGGGGTTTGGAATCCAAAGT
TCCAACCAGAAGATTTCATTGAAGATGGGTTTGATACCCACAAATCCAAATCAAAAGCCGCCATTGAATTAGGAGCTGCTTCATCTTCAGCTACAAAACAGAGCAACCAA
AAGGAAGAACACCAAGAACATCAAGAACACCAAGAACAGCTAGAAGAACCAAAAAAGGGGCTCGATCTTAATCTCTCTCTTTGA
Protein sequenceShow/hide protein sequence
MEGGRKRRKLQNIEEDDDDDEEEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEEDNPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAASSSATKQSNQ
KEEHQEHQEHQEQLEEPKKGLDLNLSL