CuGenDBv2

Gene ID	CmoCh05G010860
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	zinc finger BED domain-containing protein DAYSLEEPER isoform X5
Genome location	Cmo_Chr05:8716423..8716686
RNA-Seq Expression	CmoCh05G010860
Synteny	CmoCh05G010860
Gene Ontology terms	GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR008906 - HAT, C-terminal dimerisation domain IPR012337 - Ribonuclease H-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6599186.1 hypothetical protein SDJN03_08964, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-36

90.8

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATSVAPEDLFC RGDD+EKQRYCM HD TPALL IKSWIQSGF+M YKSNEIEYEMLIELAATSIVDSNSA SDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

KAG7030120.1 hypothetical protein SDJN02_08467, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.1e-36

90.8

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATSVAPEDLFC RGDD+EKQRYCM HD TPALL IKSWIQSGF+M YKSNEIEYEMLIELAATSIVDSNSA SDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

XP_008453550.1 PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER isoform X4 [Cucumis melo]

1.0e-35

83.91

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATS+APE+LFCGRGDDI+KQRYCMPHD+TPALLCIKSWIQSGFK+ YKS+EI+YE L+EL+ATS VDS++AGSDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

XP_031736949.1 uncharacterized protein LOC105434558 isoform X1 [Cucumis sativus]

1.0e-35

83.91

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATS+APE+LFCGRGDDI+KQRYCMPHD+TPALLCIKSWIQSGFK+ YKS+EI+YE L+EL+ATS VDS++AGSDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

XP_031736952.1 uncharacterized protein LOC105434558 isoform X3 [Cucumis sativus]

1.0e-35

83.91

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATS+APE+LFCGRGDDI+KQRYCMPHD+TPALLCIKSWIQSGFK+ YKS+EI+YE L+EL+ATS VDS++AGSDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGZ3 Uncharacterized protein

5.0e-36

83.91

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATS+APE+LFCGRGDDI+KQRYCMPHD+TPALLCIKSWIQSGFK+ YKS+EI+YE L+EL+ATS VDS++AGSDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

A0A1S3BWI0 zinc finger BED domain-containing protein DAYSLEEPER isoform X1

5.0e-36

83.91

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATS+APE+LFCGRGDDI+KQRYCMPHD+TPALLCIKSWIQSGFK+ YKS+EI+YE L+EL+ATS VDS++AGSDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

A0A1S3BXM6 zinc finger BED domain-containing protein DAYSLEEPER isoform X2

5.0e-36

83.91

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATS+APE+LFCGRGDDI+KQRYCMPHD+TPALLCIKSWIQSGFK+ YKS+EI+YE L+EL+ATS VDS++AGSDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

A0A5A7U1G1 Zinc finger BED domain-containing protein DAYSLEEPER isoform X5

5.0e-36

83.91

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATS+APE+LFCGRGDDI+KQRYCMPHD+TPALLCIKSWIQSGFK+ YKS+EI+YE L+EL+ATS VDS++AGSDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

A0A5D3BBS8 Zinc finger BED domain-containing protein DAYSLEEPER isoform X5

5.0e-36

83.91

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK
        MARDFLAVQATS+APE+LFCGRGDDI+KQRYCMPHD+TPALLCIKSWIQSGFK+ YKS+EI+YE L+EL+ATS VDS++AGSDKKSK
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G18560.1 BED zinc finger ;hAT family dimerisation domain

2.6e-29

60.71

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Query:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDK
        MARDFLAVQATS APE++FCG+G++I+KQ+YCMPHD+T +++CI+SWI++G K+ YK +EI+YE L+ELAAT   D+++ G +K
Subjt:  MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDK

Sequences

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CDS sequence

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ATGGCTCGAGACTTCTTGGCCGTGCAGGCAACGTCGGTGGCTCCTGAAGATCTGTTCTGCGGGAGAGGCGACGACATCGAGAAACAAAGATATTGTATGCCTCATGATGC
CACACCAGCTCTCCTTTGTATCAAATCATGGATTCAAAGTGGTTTCAAGATGAATTACAAGTCTAATGAGATTGAGTATGAGATGCTGATTGAACTAGCTGCTACATCAA
TTGTCGATAGCAATTCTGCTGGTTCTGACAAGAAATCAAAGTAA

mRNA sequence

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Protein sequence

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MARDFLAVQATSVAPEDLFCGRGDDIEKQRYCMPHDATPALLCIKSWIQSGFKMNYKSNEIEYEMLIELAATSIVDSNSAGSDKKSK

CmoCh05G010860 (gene) of Cucurbita moschata (Rifu) v1 genome