CuGenDBv2

Gene ID	CmoCh05G010880
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Zinc finger BED domain-containing protein DAYSLEEPER-like
Genome location	Cmo_Chr05:8719193..8722346
RNA-Seq Expression	CmoCh05G010880
Synteny	CmoCh05G010880
Gene Ontology terms	GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586218.1 hypothetical protein SDJN03_18951, partial [Cucurbita argyrosperma subsp. sororia]

4.8e-31

84.15

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLE KS+MDMSLIP+IDPIDI  GSSDKG+PNPSAKPRKKT+TSVYLKFFETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

XP_022156412.1 uncharacterized protein LOC111023311 isoform X1 [Momordica charantia]

1.5e-32

86.59

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLEPKS+MDMSLIP+IDPIDI  GSSDKGNPNPSAKPRKKT+TSVYLKFFETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

XP_022156415.1 uncharacterized protein LOC111023311 isoform X2 [Momordica charantia]

1.5e-32

86.59

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLEPKS+MDMSLIP+IDPIDI  GSSDKGNPNPSAKPRKKT+TSVYLKFFETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

XP_038890659.1 uncharacterized protein LOC120080163 isoform X1 [Benincasa hispida]

5.7e-32

86.59

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLE KSMMDMSLIP+IDPIDI  GSSDKGNPNPSAKPRKKT+TSVYLKFFETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

XP_038890660.1 uncharacterized protein LOC120080163 isoform X2 [Benincasa hispida]

5.7e-32

86.59

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLE KSMMDMSLIP+IDPIDI  GSSDKGNPNPSAKPRKKT+TSVYLKFFETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BWM2 zinc finger BED domain-containing protein DAYSLEEPER isoform X5

6.8e-31

81.71

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLEPKS+MD++LIP IDPIDID GSSDKG+PN SAKPRKKT+TSVYLK+FETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

A0A6J1DQ79 uncharacterized protein LOC111023311 isoform X2

7.3e-33

86.59

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLEPKS+MDMSLIP+IDPIDI  GSSDKGNPNPSAKPRKKT+TSVYLKFFETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

A0A6J1DS02 uncharacterized protein LOC111023311 isoform X1

7.3e-33

86.59

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLEPKS+MDMSLIP+IDPIDI  GSSDKGNPNPSAKPRKKT+TSVYLKFFETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

A0A6J1HM56 uncharacterized protein LOC111465453 isoform X2

2.3e-31

84.15

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLE KS+MDMSLIP+IDPIDI  GSSDKG+PNPSAKPRKKT+TSVYLKFFETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

A0A6J1HP62 uncharacterized protein LOC111465453 isoform X1

2.3e-31

84.15

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +DLE KS+MDMSLIP+IDPIDI  GSSDKG+PNPSAKPRKKT+TSVYLKFFETAADGKSRRCKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G18560.1 BED zinc finger ;hAT family dimerisation domain

1.5e-25

65.85

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Query:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL
        F   +++EPK+MMDM+L+P  DPIDI  GSSDK N  P    RKKT+TSVYLK+FETA D K+R+CKFCGQSY I TATGNL
Subjt:  FHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNL

Sequences

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CDS sequence

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ATGGGGCGGAAGTGTTCATGTTTCAGCTTTCAGTTCCATGTATGTCGGGATTTGGAACCCAAGTCCATGATGGATATGTCACTGATACCAAGCATTGACCCAATTGATAT
CGATTTCGGCTCGTCTGACAAGGGGAATCCAAATCCTTCAGCAAAGCCAAGAAAAAAGACATTGACATCAGTTTATCTCAAATTTTTTGAGACTGCTGCTGATGGGAAAA
GCAGAAGATGCAAGTTTTGTGGACAGAGCTACTGCATTGGAACGGCTACTGGCAATTTGAGATGA

mRNA sequence

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AAAAAAATGGCCAAATTCGCAGCCGAGCCAACCCCAATTCCAATTCCAAATCCAAATCCAAATCCACACCCTTCCTCTCTGCTCAAGCTCGCTCAGTCCCCACCCAGATC
GCCAGCGGCTCTCCTCAAAGCCCCTTTTTGCTTTTCAACTCTCTCTCGGCTTTGATCCGGCTAAGATCCATCTTGCGCCGCTCCAACCTTCTCCCCCCTTCCTCATCACT
TCAATAGTGTTTGATCGGACCCCATTTCCCGGCTTCCGACGAACCCAACTCGTCAAAAATTTCACTGAATTTTCCTTCCTAATTTACTACCCATTTCGACTCCTCCAACG
TGGTGGGTTCGAGTTTTTGTTCAAATTGGGAAATGGGTTTCTGTTTCTTCGGCCGTCTTTTGGAAGAACCCTTTAATGGAGTTCCGTTTTTGACAATTGGCTCCTCGTTG
GAATATGGGGCGGAAGTGTTCATGTTTCAGCTTTCAGTTCCATGTATGTCGGGATTTGGAACCCAAGTCCATGATGGATATGTCACTGATACCAAGCATTGACCCAATTG
ATATCGATTTCGGCTCGTCTGACAAGGGGAATCCAAATCCTTCAGCAAAGCCAAGAAAAAAGACATTGACATCAGTTTATCTCAAATTTTTTGAGACTGCTGCTGATGGG
AAAAGCAGAAGATGCAAGTTTTGTGGACAGAGCTACTGCATTGGAACGGCTACTGGCAATTTGAGATGA

Protein sequence

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MGRKCSCFSFQFHVCRDLEPKSMMDMSLIPSIDPIDIDFGSSDKGNPNPSAKPRKKTLTSVYLKFFETAADGKSRRCKFCGQSYCIGTATGNLR

CmoCh05G010880 (gene) of Cucurbita moschata (Rifu) v1 genome