; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G011740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G011740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTIR-NBS-LRR disease resistance protein
Genome locationCmo_Chr05:9262245..9262708
RNA-Seq ExpressionCmoCh05G011740
SyntenyCmoCh05G011740
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR000157 - Toll/interleukin-1 receptor homology (TIR) domain
IPR035897 - Toll/interleukin-1 receptor homology (TIR) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599270.1 Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia]7.3e-6697.71Show/hide
Query:  RRGYGSNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSF
        RRGYGSNFTGHLDMALRQKGV+VFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYL+ELVKIIECKKSKSKIVC IFYNVDPLDVGKQTRSF
Subjt:  RRGYGSNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSF

Query:  EEALPTHQDKFKMKIQIWKDVLTAAANLGGI
        EEALPTHQDKFKMKIQIWKDVLTAAANLGGI
Subjt:  EEALPTHQDKFKMKIQIWKDVLTAAANLGGI

XP_022946265.1 TMV resistance protein N-like isoform X1 [Cucurbita moschata]2.1e-5273.42Show/hide
Query:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE
        MDSSIAMT+S ALSPN +  Y            SNFT HLDMALRQKGVNVFIDDK NRGELISESLFRSIEEALISIVIFS+NYA  SW LDELVKIIE
Subjt:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE

Query:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG
        CKKSK +IV PIFY VDP DV KQT SF EAL THQ KF+ KIQIW++ LT  ANL G
Subjt:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG

XP_023537666.1 disease resistance protein RPS6-like isoform X1 [Cucurbita pepo subsp. pepo]2.6e-5576.58Show/hide
Query:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE
        MDSSIAM++S ALSPN +  Y            SNFT HLDMALRQKGVNVFIDDK NRGELISESLFRSIEEALISIVIFS+NYA  SW LDELVKIIE
Subjt:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE

Query:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG
        CKKSK +IVCPIFY VDP DV KQT SF EAL THQ KFK KIQIWKD LTAAANL G
Subjt:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG

XP_023537669.1 disease resistance protein RPS6-like isoform X4 [Cucurbita pepo subsp. pepo]2.6e-5576.58Show/hide
Query:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE
        MDSSIAM++S ALSPN +  Y            SNFT HLDMALRQKGVNVFIDDK NRGELISESLFRSIEEALISIVIFS+NYA  SW LDELVKIIE
Subjt:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE

Query:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG
        CKKSK +IVCPIFY VDP DV KQT SF EAL THQ KFK KIQIWKD LTAAANL G
Subjt:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG

XP_023545380.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111804816 [Cucurbita pepo subsp. pepo]1.6e-5273.42Show/hide
Query:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE
        MD SIAMT+S ALSPN +  Y            SNFTGHLDMALRQKGVNVFIDDK NRGELISESLFRSIEEALISIVIFS+NYA  SW LDELVKIIE
Subjt:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE

Query:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG
        CKKSK +IV PIFY VDP DV KQ  SF EAL THQ KF+MKIQIW++ LT  ANL G
Subjt:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG

TrEMBL top hitse value%identityAlignment
A0A5D3D443 TMV resistance protein N-like3.8e-4464.29Show/hide
Query:  MDSSIAMTQSPALSPN-----DRRGYG--SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKS
        MDSS  + + P    N       RG    +NFT HLDMALRQKGVNVFIDDK  RGE ISE+LF+SI+EALISI+IFS+NYA  SW LDELV IIECKKS
Subjt:  MDSSIAMTQSPALSPN-----DRRGYG--SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKS

Query:  KSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG
        K +IV P+FY VDP D+ KQ+ SF EAL  HQ KFK KIQIW++ LT AANL G
Subjt:  KSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG

A0A6J1G3A0 TMV resistance protein N-like6.7e-4970.25Show/hide
Query:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE
        M SSIA+  S AL PN    Y            SNFT HL MAL+QKGVNVFIDDK NRGE ISESLFRSIEE+L SIVIFSKNYAY SW LDELVKI+E
Subjt:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE

Query:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG
        CKKSK +IV PIFY VDP DV KQT SF EA  THQ KFK KIQIW+D LTAAANL G
Subjt:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG

A0A6J1G3D0 TMV resistance protein N-like isoform X11.0e-5273.42Show/hide
Query:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE
        MDSSIAMT+S ALSPN +  Y            SNFT HLDMALRQKGVNVFIDDK NRGELISESLFRSIEEALISIVIFS+NYA  SW LDELVKIIE
Subjt:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE

Query:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG
        CKKSK +IV PIFY VDP DV KQT SF EAL THQ KF+ KIQIW++ LT  ANL G
Subjt:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG

A0A6J1G421 TMV resistance protein N-like isoform X13.2e-5172.78Show/hide
Query:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE
        MDS IA ++S  L PN +  Y            SNFT HLDMALRQKGVNVFIDDK NRGELISESLFRSIEEALISIVIFS+NYA  SW LDELVKIIE
Subjt:  MDSSIAMTQSPALSPNDRRGYG-----------SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIE

Query:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG
         KKSK +IVCPIFY VDP DV  QT SF EAL THQ KFK KIQIWKD LTAAANL G
Subjt:  CKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGG

A0A6J1G497 disease resistance protein RPS6-like7.7e-4577.6Show/hide
Query:  SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALP
        S+F  HLDMALRQKGVNVFIDDK NRGE ISESLFRSIE ALISIVIFS+NYA  SW LDELVKIIECKK K +IV PIFY VDPLD+ KQT SF EAL 
Subjt:  SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALP

Query:  THQDKFKMKIQIWKDVLTAAANLGG
        THQ KF+ KIQIW++ LT AANL G
Subjt:  THQDKFKMKIQIWKDVLTAAANLGG

SwissProt top hitse value%identityAlignment
A0A290U7C4 Disease resistance protein Roq11.7e-2042.75Show/hide
Query:  FTGHLDMALRQKGVNVFIDDK-FNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQT-------RS
        F GHL  AL +KG++ F+DDK   RG+ IS  L ++I E+  ++V+FSKNYA  +W L+ELVKI+E  +    IV P+FY+VDP  V KQ          
Subjt:  FTGHLDMALRQKGVNVFIDDK-FNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQT-------RS

Query:  FEEALPTHQDKFKMKIQIWKDVLTAAANLGG
        FE  L   +D    K+  W++ LT  AN+ G
Subjt:  FEEALPTHQDKFKMKIQIWKDVLTAAANLGG

Q40392 TMV resistance protein N6.7e-2246.46Show/hide
Query:  FTGHLDMALRQKGVNVFIDDK-FNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPT
        FT HL   L  KG+  F DDK    G  I   L ++IEE+  +IV+FS+NYA   W L+ELVKI+ECK    + V PIFY+VDP  V  Q  SF +A   
Subjt:  FTGHLDMALRQKGVNVFIDDK-FNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPT

Query:  HQDKFK---MKIQIWKDVLTAAANLGG
        H+ K+K     IQ W+  L  AANL G
Subjt:  HQDKFK---MKIQIWKDVLTAAANLGG

Q9SZ66 Disease resistance-like protein DSC12.7e-2345.8Show/hide
Query:  SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALP
        +NFTGHL  ALR +G++ FIDD+  RG+ ++ +LF  IE++ I+I++FS NYA  +W L ELVKI+EC+ S  ++V PIFY VD  DV KQ  SF  A+P
Subjt:  SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALP

Query:  ------THQDKFKMKIQIWKDVLTAAANLGG
              T       +I  WK  L +A+N+ G
Subjt:  ------THQDKFKMKIQIWKDVLTAAANLGG

V9M2S5 Disease resistance protein RPV17.4e-2950Show/hide
Query:  NFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPT
        NFT HL  AL ++G+  F DD+  RGE I+  L ++IEE+  S+++FS+NYA+  W LDELVKI+EC+K     V PIFY+VDP  V KQ  SF EA   
Subjt:  NFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPT

Query:  HQDKFKMKIQIWKDVLTAAANLGG
        +++ +K KI  W+  LT AANL G
Subjt:  HQDKFKMKIQIWKDVLTAAANLGG

V9M398 Disease resistance protein RUN14.1e-2750.39Show/hide
Query:  NFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIEC---KKSKSKIVCPIFYNVDPLDVGKQTRSFEEA
        NFT HL  AL ++G+  F DDK  RGE I+  L ++IEE+  S+++FS+NYA   W LDELVKI+EC   KK     V PIFY+VDP  V KQ  SF EA
Subjt:  NFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIEC---KKSKSKIVCPIFYNVDPLDVGKQTRSFEEA

Query:  LPTHQDKFKMKIQIWKDVLTAAANLGG
           + +  K KI  W+  LT AANL G
Subjt:  LPTHQDKFKMKIQIWKDVLTAAANLGG

Arabidopsis top hitse value%identityAlignment
AT2G20142.1 Toll-Interleukin-Resistance (TIR) domain family protein1.8e-2242.74Show/hide
Query:  NFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPT
        NF  HL   LR+K +  F+ D+    E   ESL ++IE + IS+++FS+N+    W LDE+V I++CK+   +IV P+ Y+VDPLD+  QT SF +A   
Subjt:  NFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALPT

Query:  HQDKFKMKIQIWKDVLTAAANLGG
         +DK + ++Q WKD  T A NL G
Subjt:  HQDKFKMKIQIWKDVLTAAANLGG

AT4G12010.1 Disease resistance protein (TIR-NBS-LRR class) family1.9e-2445.8Show/hide
Query:  SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALP
        +NFTGHL  ALR +G++ FIDD+  RG+ ++ +LF  IE++ I+I++FS NYA  +W L ELVKI+EC+ S  ++V PIFY VD  DV KQ  SF  A+P
Subjt:  SNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEALP

Query:  ------THQDKFKMKIQIWKDVLTAAANLGG
              T       +I  WK  L +A+N+ G
Subjt:  ------THQDKFKMKIQIWKDVLTAAANLGG

AT5G41540.1 Disease resistance protein (TIR-NBS-LRR class) family2.8e-2344.35Show/hide
Query:  FTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEAL-PT
        F  HL      KG+  F D +  RG+ I   L ++I E+ +S+V+ SKNY   SW LDELV+I++CK+ + +IV PIFY +DP DV KQ+  F +A   T
Subjt:  FTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQTRSFEEAL-PT

Query:  HQDKFKMKIQIWKDVLTAAANLGG
           K K   Q W + LT AAN+GG
Subjt:  HQDKFKMKIQIWKDVLTAAANLGG

AT5G41750.1 Disease resistance protein (TIR-NBS-LRR class) family9.0e-2241.79Show/hide
Query:  PNDRRGYGSNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQT
        P+ R+G    F  HL      KG+  F D K +RG+ I   L + I EA +SIV+ SK YA  SW LDELV+I++CK++  +IV  +FY VDP DV KQ+
Subjt:  PNDRRGYGSNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQT

Query:  RSFEEAL-PTHQDKFKMKIQIWKDVLTAAANLGG
          F EA   T Q K +     W++ L   A + G
Subjt:  RSFEEAL-PTHQDKFKMKIQIWKDVLTAAANLGG

AT5G41750.2 Disease resistance protein (TIR-NBS-LRR class) family9.0e-2241.79Show/hide
Query:  PNDRRGYGSNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQT
        P+ R+G    F  HL      KG+  F D K +RG+ I   L + I EA +SIV+ SK YA  SW LDELV+I++CK++  +IV  +FY VDP DV KQ+
Subjt:  PNDRRGYGSNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDVGKQT

Query:  RSFEEAL-PTHQDKFKMKIQIWKDVLTAAANLGG
          F EA   T Q K +     W++ L   A + G
Subjt:  RSFEEAL-PTHQDKFKMKIQIWKDVLTAAANLGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTTCTATTGCTATGACACAATCACCAGCTCTTTCTCCAAATGATAGGAGAGGATACGGATCCAACTTCACCGGTCATCTTGACATGGCCTTGCGGCAAAAGGG
AGTCAACGTCTTCATTGATGACAAGTTCAACAGGGGTGAGTTAATCTCTGAATCCCTTTTCCGATCTATAGAGGAAGCTTTAATTTCTATTGTTATATTCTCGAAAAATT
ATGCATATTTTTCCTGGTATCTGGATGAATTGGTGAAAATAATCGAATGTAAAAAATCTAAGAGCAAGATAGTTTGCCCAATTTTCTATAACGTGGATCCATTGGATGTC
GGAAAACAAACCAGGAGTTTTGAAGAAGCATTGCCCACACATCAAGATAAGTTCAAGATGAAAATCCAAATTTGGAAGGATGTTTTAACTGCCGCTGCCAACTTGGGTGG
GATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTTCTATTGCTATGACACAATCACCAGCTCTTTCTCCAAATGATAGGAGAGGATACGGATCCAACTTCACCGGTCATCTTGACATGGCCTTGCGGCAAAAGGG
AGTCAACGTCTTCATTGATGACAAGTTCAACAGGGGTGAGTTAATCTCTGAATCCCTTTTCCGATCTATAGAGGAAGCTTTAATTTCTATTGTTATATTCTCGAAAAATT
ATGCATATTTTTCCTGGTATCTGGATGAATTGGTGAAAATAATCGAATGTAAAAAATCTAAGAGCAAGATAGTTTGCCCAATTTTCTATAACGTGGATCCATTGGATGTC
GGAAAACAAACCAGGAGTTTTGAAGAAGCATTGCCCACACATCAAGATAAGTTCAAGATGAAAATCCAAATTTGGAAGGATGTTTTAACTGCCGCTGCCAACTTGGGTGG
GATCTAG
Protein sequenceShow/hide protein sequence
MDSSIAMTQSPALSPNDRRGYGSNFTGHLDMALRQKGVNVFIDDKFNRGELISESLFRSIEEALISIVIFSKNYAYFSWYLDELVKIIECKKSKSKIVCPIFYNVDPLDV
GKQTRSFEEALPTHQDKFKMKIQIWKDVLTAAANLGGI