| GenBank top hits | e value | %identity | Alignment |
|---|
| AAB82754.1 retrofit [Oryza longistaminata] | 2.0e-210 | 35.81 | Show/hide |
Query: SPSTISNTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEA---
S + +T TRAR R+ L +KK A Y K++ L E+AA G L ++D++ Y++AGL D+ P V+++ KS+ +T+ ++++ L+ +E
Subjt: SPSTISNTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEA---
Query: ---HQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDRRGPSARPSCQICGKVGHTAIRCWHRMDESY
Q A N G GR + G A G ++GR RGRG G RP+CQ+C K GHTA CW+R DE Y
Subjt: ---HQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDRRGPSARPSCQICGKVGHTAIRCWHRMDESY
Query: -QDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKF
DE A AAT+SY ID NWY DTGATDHIT +L++L E Y+GGEQ+ +GA + + H GH++++T +R++ L N+L+V + K+L+S +
Subjt: -QDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKF
Query: SRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPI-KPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCA---------------
+ DN F E FSIKD+ +R LL G+C GLYPI K K L + + ++WH+RLGHPS +VK ++ NN+ C+
Subjt: SRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPI-KPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCA---------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------SYSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQS-------------------THNALDLCTLHLGNSS------
+S+ HKG+KCLD SGRVY+SRDV+FDENVFPF N+ ++S TH + L + +
Subjt: ------------SYSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQS-------------------THNALDLCTLHLGNSS------
Query: --TNLENDHMHMSGPTNSLDAENLV----------STSASELPQQSSASLPCESALVVPPMIEASAPPPAD--DIAQCPVESSAAG-------QP----T
T+ EN H N + EN++ S + P S++ P + A + A++ D + S+AAG QP T
Subjt: --TNLENDHMHMSGPTNSLDAENLV----------STSASELPQQSSASLPCESALVVPPMIEASAPPPAD--DIAQCPVESSAAG-------QP----T
Query: VVASVAPLATTDTAIPSMWILHLLLIPR-------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDR
V+A+VAP + T + S + SS EP + A+ WR AM E+ AL KN TWHLV G N+I CKWV+K+K+K DG++DR
Subjt: VVASVAPLATTDTAIPSMWILHLLLIPR-------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDR
Query: YKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSR
YKARL+ D+QNAFLHGFL E+VYM+QPPGF S P Y+CKLDK+LYGLKQAPRAW+SR
Subjt: YKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSR
Query: LSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDML
LS K ++L F SKAD SLF NK GI M++L+YVDDII+ SS+ A LL L +F +KDLG L YFLGIEV S+G+ILTQ KY DLL R +M
Subjt: LSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDML
Query: TSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSD
K V TP+ SEKL L G L P D +YRS+VGALQYL+LTRPDI++ VN+VCQF+ +PT+ HW VKRILRYL+ + L + KS++ L+ +SD
Subjt: TSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSD
Query: ADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVD
ADWAG+ DDR+STGG+ +F G NL+SWS+RKQ TVSRSS EAEYKAVA+ TAELIW+Q LL+ELGI +A +WCDN+GA YLSANP+FH RTKH+EVD
Subjt: ADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVD
Query: YHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLNL
YHFVRERVS + L++ + S DQ+AD TK L A F+ +LNL
Subjt: YHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLNL
|
|
| KAG8087752.1 hypothetical protein GUJ93_ZPchr0010g8288 [Zizania palustris] | 9.8e-218 | 37.89 | Show/hide |
Query: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAE-LQL
+RA+ Q+R++LA K+ + +YF KIK +A L+A GS L ++D+++Y+LAGLGP Y+ V SM SE ++L D++++L+ +EA Q+ +E Q
Subjt: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAE-LQL
Query: NSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDRRG------------------PSAR---PSCQICGKVGHTAIRCW
+ SSAN R Y GG Q RGR + GRGR +G R G G AR P+CQIC K GH A+ CW
Subjt: NSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDRRG------------------PSAR---PSCQICGKVGHTAIRCW
Query: HRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHL
+R E Y E +A +Y++D NWY D+GATDHITSD+ RL V Y+G EQVQV NGA L +LHTGH+ I+ ++ L L NILHV ISKHL
Subjt: HRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHL
Query: LSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRS-TTHAQWHARLGHPSSQVVKSILR----------------
+SVHK + DN+ + EF P F +KD+ +++ L +G C+ GLYP+ S L ++S S A WH RLGHPSS + S+L
Subjt: LSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRS-TTHAQWHARLGHPSSQVVKSILR----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------LNNISC---------------------------------------------------------------------------------------
+ +SC
Subjt: -------LNNISC---------------------------------------------------------------------------------------
Query: --------------ASYSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPF-KRARPNSSPTMQSTHNALDLCTLHLGNSST---NLENDHMHMSGP----T
YS HKGYKCL +GR+Y+SRDV FDE +FPF + +S+P+ T L + ST L+ H+ + P T
Subjt: --------------ASYSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPF-KRARPNSSPTMQSTHNALDLCTLHLGNSST---NLENDHMHMSGP----T
Query: NSLDAENLVSTSASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESSAAGQPTVVAS---VAPLATTDTAI-----PSMWILHLLLIPRSSA
N + T A++L P + P +++ ++ + + P + ++ +PT S P TD + ++ L L P
Subjt: NSLDAENLVSTSASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESSAAGQPTVVAS---VAPLATTDTAI-----PSMWILHLLLIPRSSA
Query: SEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARL---------------------------------
+EP S+ A + P WR AM E+ AL +NKTWHL+ NV+ C+W+FK+K K DG++DRYKARL
Subjt: SEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARL---------------------------------
Query: ---------IDIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDI
IDIQNAFLHG L E+VYM+QPPGF +SQHP Y+CKLDK+LYGLKQAPRAW +LS+K L FT SK+D SLFI ++ + +Y+L+YVDDI
Subjt: ---------IDIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDI
Query: IIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGAL
II SS++ +KLL QL +F VKDLG L YFLGIE + G++LTQ KY++DLL RT+M K TPM +EKL GK L ++ YRS VGAL
Subjt: IIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGAL
Query: QYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRS
QYL+LTRPDISF VN+VCQF+ PT HW VKRILRYL T + L + +S + LSAFSDADWAG PDDRRSTGG+ IF G NL+SWSSRKQST+SRS
Subjt: QYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRS
Query: SMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFS
S EAEYKA+A+ATAELIW++ LL+EL + LWCDN+GATYL+ANP+FH RTKH+E+D HFVRERV+ QL+V+ ISS DQ+ADI TKPLP P F
Subjt: SMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFS
Query: YFRRHLNLV
F LNLV
Subjt: YFRRHLNLV
|
|
| pir|T02087| gag/pol polyprotein - maize retrotransposon Hopscotch [Zea mays] | 1.7e-222 | 37.92 | Show/hide |
Query: STMSCSSSPS---TIS---NTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
S ++CS+S S T+S ++ +RAR R+ LAT+KK S A YF K++G A EL AAG L D++ +++LL GL D++P VT++ +S+ +T D
Subjt: STMSCSSSPS---TIS---NTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
Query: VFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDR------RGPSARPSCQICGKVGH
++ L+ YE + L +GSS+ A + + G ++ GG+ +RG R RGRG S+G S G+ S+RP CQ+C +VGH
Subjt: VFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDR------RGPSARPSCQICGKVGH
Query: TAIRCWHRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVI
TA+ CW+R DE+Y + SA A S+ WY+DTGATDHIT DLDRL +H+ Y G +Q+ NG + + + G++++ T++RSL LR++LHV
Subjt: TAIRCWHRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVI
Query: EISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS---
K+L+SVH+ + DNDVF EF HF IKDRQ++ LL+G+C GLYP+ P LKH S WH RLGHPS +V ++ NN+ C S
Subjt: EISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS---
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGPTN
YS+ HKG+KCLD +GR+Y+SRDV+FDE+VFPF A N + ++ T L L GN N+ DH + ++
Subjt: -----------------------YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGPTN
Query: S---------LDAENLVSTS---ASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSAAGQPTVVASVAPLATTD------------
S L + V TS A LP + ALV ++ A++P P A +S ++G P SV + D
Subjt: S---------LDAENLVSTS---ASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSAAGQPTVVASVAPLATTD------------
Query: ---------TAIPSMWILHLLLIPR-------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGS
A P + H + P+ + +EP+S A+ P WR AM EFQALQKN TW LV P N+IDCKWVFK+K DGS
Subjt: ---------TAIPSMWILHLLLIPR-------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGS
Query: IDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAW
IDR KARL+ D+QNAFLHG L E VYMKQPPGF D+ HP Y C L KSLYGLKQ PRAW
Subjt: IDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAW
Query: FSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLART
+SRLS K L F PSKADVSLFI+N +YIL+YVDDIII SS AI+ +L +L+DDF +KDLG L YFLGIEV GL+L Q KY RDLL R
Subjt: FSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLART
Query: DMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSA
M K V TP+ SEKL + G LSPE+TT+YRSVVGALQYL+LTRPD+S+ +NRVCQF+ +PT +HW VKRILR + TI + L + S + +LSA
Subjt: DMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSA
Query: FSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHV
FSDADWAG PDDR+STGGY +F G NLISW+S+KQSTVSRSS EAEYKA+A+ATAE+IW+Q LL ELGI LWCDN+GATYLS+ PIF+ RTKH+
Subjt: FSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHV
Query: EVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRR
EVD+HFVR+RV +++LD+R+IS+ DQ+AD TK L + FRR
Subjt: EVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRR
|
|
| QCC26836.1 Hopscotch gagpol polyprotein [Zea mays] | 1.1e-224 | 38.1 | Show/hide |
Query: STMSCSSSPS---TIS---NTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
S ++CS+S S T+S ++ +RAR R+ LAT+KK S A YF K++G A EL AAG L D++ +++LL GL D++P VT++ +S+ +T D
Subjt: STMSCSSSPS---TIS---NTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
Query: VFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDR------RGPSARPSCQICGKVGH
++ L+ YE + L +GSS+ A + G ++ GG+ +RG R RGRG S+G S G+ S+RP CQ+C +VGH
Subjt: VFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDR------RGPSARPSCQICGKVGH
Query: TAIRCWHRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVI
TA+ CW+R DE+Y + SA A S+ WY+DTGATDHIT DLDRL +H+ Y G +Q+ NG + + + G++++ T++RSL LR++LHV
Subjt: TAIRCWHRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVI
Query: EISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS---
K+L+SVH+ + DNDVF EF HF IKDRQ++ LL+G+C GLYP+ P LKH S WH RLGHPS +V ++ NN+ C S
Subjt: EISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS---
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGPTN
YS+ HKG+KCLD +GR+Y+SRDV+FDE+VFPF A N + ++ T L L GN N+ DH + ++
Subjt: -----------------------YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGPTN
Query: S---------LDAENLVSTS---ASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSAAGQPTVVASVAPLATTD------------
S L + V TS A LP + ALV ++ A++P P A +S ++G P SV + D
Subjt: S---------LDAENLVSTS---ASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSAAGQPTVVASVAPLATTD------------
Query: ---------TAIPSMWILHLLLIPR-------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGS
A P + H + P+ + +EP+S A+ P WR AM EFQALQKN TW LV P N+IDCKWVFK+K DGS
Subjt: ---------TAIPSMWILHLLLIPR-------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGS
Query: IDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAW
IDR KARL+ D+QNAFLHG L E VYMKQPPGF D+ HP Y C L KSLYGLKQAPRAW
Subjt: IDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAW
Query: FSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLART
+SRLS K L F PSKADVSLFI+N +YIL+YVDDIII SS AI+ +L +L+DDF +KDLG L YFLGIEV GL+L Q KY RDLL R
Subjt: FSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLART
Query: DMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSA
M K V TP+ SEKL + G LSPE+TT+YRSVVGALQYL+LTRPD+S+ +NRVCQF+ +PT +HW VKRILR + TI + L + S + +LSA
Subjt: DMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSA
Query: FSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHV
FSDADWAG PDDR+STGGY +F G NLISW+S+KQSTVSRSS EAEYKA+A+ATAE+IW+Q LL ELGI LWCDN+GATYLS+ PIF+ RTKH+
Subjt: FSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHV
Query: EVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLNL
EVD+HFVR+RV +++LD+R+IS+ DQ+AD TK L + FRR+LNL
Subjt: EVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLNL
|
|
| RLM69625.1 putative polyprotein [Panicum miliaceum] | 6.1e-228 | 38.4 | Show/hide |
Query: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLN
TRA+T +R+ L T+KK S +Y K+KG A ELAA G AL D++++A++ GL DY+P VTS+TT+ + +++ D++A L+ +E + ELQ +
Subjt: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLN
Query: SGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGY-APSRPAGDRR-------GPSARPSCQICGKVGHTAIRCWHRMDESYQDEPSSA
GS A+ R N GS G + RG+R RG+ R +G AP + G R+ G P CQIC K GH A RCWHR DE+Y P
Subjt: SGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGY-APSRPAGDRR-------GPSARPSCQICGKVGHTAIRCWHRMDESYQDEPSSA
Query: PPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFF
A A ++Y +D NWY+DTGATDHITSDL++L + E YHG +Q+ +G+ + + + GH+ + T +RSL L N+LHV + +K+L+SVH+ ++DN F
Subjt: PPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFF
Query: EFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS-----------------------
EF P F IKD+ +R ++L G C GLYP+ ++K T ++WH RLGHPS +V ++ NN+SC+S
Subjt: EFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALD---LCTLHLGN------SSTNLENDHMH-------MSGPTNSLDA
YS+ HKGYKCLD SGRVY+SRDVIFDE VFPF N+ +++ L + +L + STN ND H S P N+
Subjt: ---YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALD---LCTLHLGN------SSTNLENDHMH-------MSGPTNSLDA
Query: ENLVSTSASELPQQSSASLPCESALVVPPMIEASAPPPADDIA-----QCPVESSAAGQPTVVASVAPLATTDTAIPSMWILHLLLIPR-----------
+ S S + Q S + P + VVPP P + A + SSAA T V AP A A PS PR
Subjt: ENLVSTSASELPQQSSASLPCESALVVPPMIEASAPPPADDIA-----QCPVESSAAGQPTVVASVAPLATTDTAIPSMWILHLLLIPR-----------
Query: ------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI-----------------
+++ EP S A+ W+ AM+ E+ AL NKTWHLV P+ G+NVIDCKWV+K+K+K DGS+DRYKARL+
Subjt: ------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI-----------------
Query: -------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFN
D+QNAFLHG+L EDVYMKQPPG+ D GY+CKLDK+LYGLK+APRAW+SRLS+K QL F SKAD SLF +N
Subjt: -------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFN
Query: KTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKL
K + +YILIYVDDII+ SS+ A LL L+ +F +KDLG L +FLGIEV+ ++G++LTQ KY +D+L R M+ K V +P+ SEKL + G L
Subjt: KTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKL
Query: SPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGN
P+D T YRS+VG LQYL LTRPDISF VN+VCQ++ +PT++HWATVKRILRYL T+++ L + KS + L+SAFSDADWAG+ DDRRSTGG+ +F G N
Subjt: SPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGN
Query: LISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQ
LISWS+RKQSTVSRSS EAEYKAVA+ATAE++WIQ LL ELGI + LWCDNIGA YLSANP+FH RTKH+EVDYHFVRERV+ R LD+ IS++DQ
Subjt: LISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQ
Query: LADIMTKPLPAPSFSYFRRHLNL
+A+ TKPL + F+ +LNL
Subjt: LADIMTKPLPAPSFSYFRRHLNL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9H267 CCHC-type domain-containing protein | 9.2e-214 | 41.43 | Show/hide |
Query: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQL-
+RAR I +L+T KK D S A+YF K GL LAA L +++ I++LLAGLG +++ F+T++ +++ ++++ ++ HL+ +E Q ++ L
Subjt: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQL-
Query: ----------NSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDRRGPSARPSCQICGKVGHTAIRCWHRMDESYQDEP
+SGS N GR N S + Q+ NRG R RGRG SQ ++RP+CQ+CGK GH A+ C+HR D SY EP
Subjt: ----------NSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDRRGPSARPSCQICGKVGHTAIRCWHRMDESYQDEP
Query: SSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVH-EHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDN
+ AL AT +D NWY+D+GAT H+TSDL L V + YHG EQ++VGNG +L + H G + + + + S L ++LHV +IS++LLS+ KF+ D
Subjt: SSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVH-EHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDN
Query: DVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPI--------KPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCASYSSSHKGYKCL
+ F E P F++KD+ + K LL+G SGLYP + S V +H QWH+ L H+GYKCL
Subjt: DVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPI--------KPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCASYSSSHKGYKCL
Query: DTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNAL-----------------DLCTLHLGNSSTNLENDH----------------MHMSGPTNS
+GR+Y+SRDV+F E +FPF + + SP +L T H +STN+ + + H P NS
Subjt: DTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNAL-----------------DLCTLHLGNSSTNLENDH----------------MHMSGPTNS
Query: LD----AENLVSTSASEL---PQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESS--AAGQ---PTVVAS----VAPLATTDTAIPSMWILHLLL
+ +ST A L P + +P + +P I P PA Q P S+ AA Q P V S P TD + LL
Subjt: LD----AENLVSTSASEL---PQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESS--AAGQ---PTVVAS----VAPLATTDTAIPSMWILHLLL
Query: IPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARL---------------------------
+ S EPT + +A + WRQAMN EF AL N TW LV N+I CKWVF++K+K DGSI+R+KARL
Subjt: IPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARL---------------------------
Query: ---------------IDIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYIL
IDIQNAFLHG L+E+V+M QPPG+ +P ++CKL K+LYGLKQAPRAWFSRLS+K L+L F S++D SLFI+ T + M+IL
Subjt: ---------------IDIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYIL
Query: IYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYR
IYVDDIII SS +AI+ LL L DF VKDLG L++FLG+EV T G++L+Q +YI DLL RT M +K + TPM + L G+ D T YR
Subjt: IYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYR
Query: SVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQ
S VGALQYL LTRPDI+F VN++ QF+ PT +HW +VKR+LRYL TI L +++SS ++ AFSDADWAG+ DDRRSTG Y IF G NLISWS +KQ
Subjt: SVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQ
Query: STVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPL
+TV+RSS EAEYKA+A+A AE+ W+Q LL ELG S + + LWCDNIGATYLS NP+FH RTKH+E+D+HFVR+ V+++ L +R +S+ DQLAD++TKPL
Subjt: STVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPL
Query: PAPSFSYFRRHLNLV
+ F+ R LN++
Subjt: PAPSFSYFRRHLNLV
|
|
| A0A2N9HBX8 Uncharacterized protein | 7.1e-214 | 39.55 | Show/hide |
Query: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLN
+RART QI +LAT KK D S A+YF K GLA LAA L D +++++LLAGLGPD+D VTS+ +++ ++L+D++ HL+ +E H Q+Q + L+
Subjt: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLN
Query: SGSSANYTGRAELQLNLGSSANYASRGGQ----QKNRGRRDRGRGRSQGYAPSRPAGDRRGPSARPSCQICGKVGHTAIRCWHRMDESYQDEPSSAPPTA
G++ + G ++Y+ G+ Q R RGRGRS G RP CQ+CGK+GH A+ C+HR D SY + S A
Subjt: SGSSANYTGRAELQLNLGSSANYASRGGQ----QKNRGRRDRGRGRSQGYAPSRPAGDRRGPSARPSCQICGKVGHTAIRCWHRMDESYQDEPSSAPPTA
Query: LAATSSYKIDPNWYSDTGATDHITSDLDRLAVH-EHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFFEFD
L AT + D NWY D+GAT H+T+DL L V + Y G +Q++VGNG +L + H G + + + S L+N+LHV IS +LLSV KF+ D + F E
Subjt: LAATSSYKIDPNWYSDTGATDHITSDLDRLAVH-EHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFFEFD
Query: PWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNL------------KHVLVSRSTTHAQWHARLGHPSSQVVK--------------------------
P F++KDR +R++LL G +GLYP PS V L H + + WH+RLGHP+ ++V
Subjt: PWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNL------------KHVLVSRSTTHAQWHARLGHPSSQVVK--------------------------
Query: -----------------------------------------------SILRLNNISC---------------------ASYSSSHKGYKCLDTDSGRVYM
S L+ SC YS HKGYKCL SGR+Y+
Subjt: -----------------------------------------------SILRLNNISC---------------------ASYSSSHKGYKCLDTDSGRVYM
Query: SRDVIFDENVFPFKR--------------------------ARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGP---TNSLDAENLVSTSASE
SRDVIF EN FPF A P P+ Q N + + L +S + + +S P T++ L ST
Subjt: SRDVIFDENVFPFKR--------------------------ARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGP---TNSLDAENLVSTSASE
Query: LPQQ--------SSASLPCESALVVPPMIEAS-APPPADDIAQCPVESSAAGQPTVVASVAPLATTDTAIPSMWILHLLLIPR-SSASEPTSHIIAMEHP
P Q SS++ ESA P EAS + PA P + Q + P TD + L+ + S+ASEPT + A++
Subjt: LPQQ--------SSASLPCESALVVPPMIEAS-APPPADDIAQCPVESSAAGQPTVVASVAPLATTDTAIPSMWILHLLLIPR-SSASEPTSHIIAMEHP
Query: LWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARL------------------------------------------IDIQ
WRQAMN EF AL KN TWHLV N++ CKWVF++K+K DGSI+R+KARL IDIQ
Subjt: LWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARL------------------------------------------IDIQ
Query: NAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKL
NAFLHG L E V+M QPPG+ + +P ++C L K++YGLKQAPRAWFSRLSS+ + F S++D SLFI+ K + MY+LIYVDDII+ S S AI L
Subjt: NAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKL
Query: LTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFC
L L+ DF VKDLG L++FLG+EV + G++L+Q +YI DLL RT M +K V TPM S L G+ + D T +RS VGALQYL+LTRPDI+F
Subjt: LTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFC
Query: VNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADAT
VN++ QFM PT++HW +VKR+LRYL TI + + ++S + + AFSDADWAG+ DDRRSTG Y +F G NLISWS +KQ+TV+RSS EAEYKA+A+
Subjt: VNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADAT
Query: AELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLNLV
AE+ W+Q LL ELG SQ+ LWCDNIGATYLS+NP+FH RTKHVE+D+HFVR+ V+T+ + V+ +S+ DQLAD++TKP+ + F+ R LN++
Subjt: AELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLNLV
|
|
| A0A3L6Q0W7 Putative polyprotein | 3.0e-228 | 38.4 | Show/hide |
Query: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLN
TRA+T +R+ L T+KK S +Y K+KG A ELAA G AL D++++A++ GL DY+P VTS+TT+ + +++ D++A L+ +E + ELQ +
Subjt: TRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLN
Query: SGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGY-APSRPAGDRR-------GPSARPSCQICGKVGHTAIRCWHRMDESYQDEPSSA
GS A+ R N GS G + RG+R RG+ R +G AP + G R+ G P CQIC K GH A RCWHR DE+Y P
Subjt: SGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGY-APSRPAGDRR-------GPSARPSCQICGKVGHTAIRCWHRMDESYQDEPSSA
Query: PPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFF
A A ++Y +D NWY+DTGATDHITSDL++L + E YHG +Q+ +G+ + + + GH+ + T +RSL L N+LHV + +K+L+SVH+ ++DN F
Subjt: PPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFF
Query: EFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS-----------------------
EF P F IKD+ +R ++L G C GLYP+ ++K T ++WH RLGHPS +V ++ NN+SC+S
Subjt: EFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALD---LCTLHLGN------SSTNLENDHMH-------MSGPTNSLDA
YS+ HKGYKCLD SGRVY+SRDVIFDE VFPF N+ +++ L + +L + STN ND H S P N+
Subjt: ---YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALD---LCTLHLGN------SSTNLENDHMH-------MSGPTNSLDA
Query: ENLVSTSASELPQQSSASLPCESALVVPPMIEASAPPPADDIA-----QCPVESSAAGQPTVVASVAPLATTDTAIPSMWILHLLLIPR-----------
+ S S + Q S + P + VVPP P + A + SSAA T V AP A A PS PR
Subjt: ENLVSTSASELPQQSSASLPCESALVVPPMIEASAPPPADDIA-----QCPVESSAAGQPTVVASVAPLATTDTAIPSMWILHLLLIPR-----------
Query: ------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI-----------------
+++ EP S A+ W+ AM+ E+ AL NKTWHLV P+ G+NVIDCKWV+K+K+K DGS+DRYKARL+
Subjt: ------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI-----------------
Query: -------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFN
D+QNAFLHG+L EDVYMKQPPG+ D GY+CKLDK+LYGLK+APRAW+SRLS+K QL F SKAD SLF +N
Subjt: -------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFN
Query: KTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKL
K + +YILIYVDDII+ SS+ A LL L+ +F +KDLG L +FLGIEV+ ++G++LTQ KY +D+L R M+ K V +P+ SEKL + G L
Subjt: KTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKL
Query: SPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGN
P+D T YRS+VG LQYL LTRPDISF VN+VCQ++ +PT++HWATVKRILRYL T+++ L + KS + L+SAFSDADWAG+ DDRRSTGG+ +F G N
Subjt: SPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGN
Query: LISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQ
LISWS+RKQSTVSRSS EAEYKAVA+ATAE++WIQ LL ELGI + LWCDNIGA YLSANP+FH RTKH+EVDYHFVRERV+ R LD+ IS++DQ
Subjt: LISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQ
Query: LADIMTKPLPAPSFSYFRRHLNL
+A+ TKPL + F+ +LNL
Subjt: LADIMTKPLPAPSFSYFRRHLNL
|
|
| A0A4D6GKR5 Hopscotch gagpol polyprotein | 5.2e-225 | 38.1 | Show/hide |
Query: STMSCSSSPS---TIS---NTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
S ++CS+S S T+S ++ +RAR R+ LAT+KK S A YF K++G A EL AAG L D++ +++LL GL D++P VT++ +S+ +T D
Subjt: STMSCSSSPS---TIS---NTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
Query: VFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDR------RGPSARPSCQICGKVGH
++ L+ YE + L +GSS+ A + G ++ GG+ +RG R RGRG S+G S G+ S+RP CQ+C +VGH
Subjt: VFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDR------RGPSARPSCQICGKVGH
Query: TAIRCWHRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVI
TA+ CW+R DE+Y + SA A S+ WY+DTGATDHIT DLDRL +H+ Y G +Q+ NG + + + G++++ T++RSL LR++LHV
Subjt: TAIRCWHRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVI
Query: EISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS---
K+L+SVH+ + DNDVF EF HF IKDRQ++ LL+G+C GLYP+ P LKH S WH RLGHPS +V ++ NN+ C S
Subjt: EISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS---
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGPTN
YS+ HKG+KCLD +GR+Y+SRDV+FDE+VFPF A N + ++ T L L GN N+ DH + ++
Subjt: -----------------------YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGPTN
Query: S---------LDAENLVSTS---ASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSAAGQPTVVASVAPLATTD------------
S L + V TS A LP + ALV ++ A++P P A +S ++G P SV + D
Subjt: S---------LDAENLVSTS---ASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSAAGQPTVVASVAPLATTD------------
Query: ---------TAIPSMWILHLLLIPR-------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGS
A P + H + P+ + +EP+S A+ P WR AM EFQALQKN TW LV P N+IDCKWVFK+K DGS
Subjt: ---------TAIPSMWILHLLLIPR-------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGS
Query: IDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAW
IDR KARL+ D+QNAFLHG L E VYMKQPPGF D+ HP Y C L KSLYGLKQAPRAW
Subjt: IDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAW
Query: FSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLART
+SRLS K L F PSKADVSLFI+N +YIL+YVDDIII SS AI+ +L +L+DDF +KDLG L YFLGIEV GL+L Q KY RDLL R
Subjt: FSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLART
Query: DMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSA
M K V TP+ SEKL + G LSPE+TT+YRSVVGALQYL+LTRPD+S+ +NRVCQF+ +PT +HW VKRILR + TI + L + S + +LSA
Subjt: DMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSA
Query: FSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHV
FSDADWAG PDDR+STGGY +F G NLISW+S+KQSTVSRSS EAEYKA+A+ATAE+IW+Q LL ELGI LWCDN+GATYLS+ PIF+ RTKH+
Subjt: FSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHV
Query: EVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLNL
EVD+HFVR+RV +++LD+R+IS+ DQ+AD TK L + FRR+LNL
Subjt: EVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLNL
|
|
| V9GZT4 Copia-like retrotransposon Hopscotch polyprotein | 8.3e-223 | 37.92 | Show/hide |
Query: STMSCSSSPS---TIS---NTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
S ++CS+S S T+S ++ +RAR R+ LAT+KK S A YF K++G A EL AAG L D++ +++LL GL D++P VT++ +S+ +T D
Subjt: STMSCSSSPS---TIS---NTVTRARTTQIRVELATSKKRDQSAANYFCKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
Query: VFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDR------RGPSARPSCQICGKVGH
++ L+ YE + L +GSS+ A + + G ++ GG+ +RG R RGRG S+G S G+ S+RP CQ+C +VGH
Subjt: VFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDR------RGPSARPSCQICGKVGH
Query: TAIRCWHRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVI
TA+ CW+R DE+Y + SA A S+ WY+DTGATDHIT DLDRL +H+ Y G +Q+ NG + + + G++++ T++RSL LR++LHV
Subjt: TAIRCWHRMDESYQDEPSSAPPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVI
Query: EISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS---
K+L+SVH+ + DNDVF EF HF IKDRQ++ LL+G+C GLYP+ P LKH S WH RLGHPS +V ++ NN+ C S
Subjt: EISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLYPIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSILRLNNISCAS---
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGPTN
YS+ HKG+KCLD +GR+Y+SRDV+FDE+VFPF A N + ++ T L L GN N+ DH + ++
Subjt: -----------------------YSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQSTHNALDLCTLHLGNSSTNLENDHMHMSGPTN
Query: S---------LDAENLVSTS---ASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSAAGQPTVVASVAPLATTD------------
S L + V TS A LP + ALV ++ A++P P A +S ++G P SV + D
Subjt: S---------LDAENLVSTS---ASELPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSAAGQPTVVASVAPLATTD------------
Query: ---------TAIPSMWILHLLLIPR-------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGS
A P + H + P+ + +EP+S A+ P WR AM EFQALQKN TW LV P N+IDCKWVFK+K DGS
Subjt: ---------TAIPSMWILHLLLIPR-------------SSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGS
Query: IDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAW
IDR KARL+ D+QNAFLHG L E VYMKQPPGF D+ HP Y C L KSLYGLKQ PRAW
Subjt: IDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAW
Query: FSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLART
+SRLS K L F PSKADVSLFI+N +YIL+YVDDIII SS AI+ +L +L+DDF +KDLG L YFLGIEV GL+L Q KY RDLL R
Subjt: FSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLART
Query: DMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSA
M K V TP+ SEKL + G LSPE+TT+YRSVVGALQYL+LTRPD+S+ +NRVCQF+ +PT +HW VKRILR + TI + L + S + +LSA
Subjt: DMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSA
Query: FSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHV
FSDADWAG PDDR+STGGY +F G NLISW+S+KQSTVSRSS EAEYKA+A+ATAE+IW+Q LL ELGI LWCDN+GATYLS+ PIF+ RTKH+
Subjt: FSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHV
Query: EVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRR
EVD+HFVR+RV +++LD+R+IS+ DQ+AD TK L + FRR
Subjt: EVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRR
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.4e-78 | 34.26 | Show/hide |
Query: WRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI------------------------------------------DIQN
W +A+N E A + N TW + N++D +WVF +K G+ RYKARL+ D++
Subjt: WRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI------------------------------------------DIQN
Query: AFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGI--QMYILIYVDDIIIISSSSTAIEK
AFL+G L E++YM+ P G S + +CKL+K++YGLKQA R WF + +F S D ++I +K I +Y+L+YVDD++I + T +
Subjt: AFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGI--QMYILIYVDDIIIISSSSTAIEK
Query: LLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPED-TTRYRSVVGALQYLSL-TRPDI
L + F + DL + +F+GI + + L+Q Y++ +L++ +M V TP LPS+ +N S ED T RS++G L Y+ L TRPD+
Subjt: LLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPED-TTRYRSVVGALQYLSL-TRPDI
Query: SFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSST--DLLSAFSDADWAGNPDDRRSTGGYVI-FFGGNLISWSSRKQSTVSRSSMEAEYK
+ VN + ++ S S W +KR+LRYL TIDM L K+ + + + D+DWAG+ DR+ST GY+ F NLI W++++Q++V+ SS EAEY
Subjt: SFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSST--DLLSAFSDADWAGNPDDRRSTGGYVI-FFGGNLISWSSRKQSTVSRSSMEAEYK
Query: AVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLN
A+ +A E +W++ LL + I ++ DN G ++ NP H+R KH+++ YHF RE+V + + I +++QLADI TKPLPA F R L
Subjt: AVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYFRRHLN
Query: LV
L+
Subjt: LV
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-80 | 36.68 | Show/hide |
Query: SSASEPTSHIIAMEHPLWRQ---AMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI--------------------------
S EP S + HP Q AM +E ++LQKN T+ LV G + CKWVFKLK+ D + RYKARL+
Subjt: SSASEPTSHIIAMEHPLWRQ---AMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI--------------------------
Query: ----------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFI--FNKTGIQMY
D++ AFLHG L E++YM+QP GF + +CKL+KSLYGLKQAPR W+ + S + + +D ++ F++ +
Subjt: ----------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFI--FNKTGIQMY
Query: ILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEV--RHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDT
+L+YVDD++I+ I KL L F +KDLG LG+++ TS L L+Q KYI +L R +M +K V TP+ KL KK+ P
Subjt: ILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEV--RHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDT
Query: TR--------YRSVVGALQY-LSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIF
Y S VG+L Y + TRPDI+ V V +F+ +P HW VK ILRYL T LC S +L ++DAD AG+ D+R+S+ GY+
Subjt: TR--------YRSVVGALQY-LSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIF
Query: FGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVIS
F G ISW S+ Q V+ S+ EAEY A + E+IW++ L+ELG+ Q + ++CD+ A LS N ++H RTKH++V YH++RE V L V IS
Subjt: FGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVIS
Query: SKDQLADIMTKPLPAPSF
+ + AD++TK +P F
Subjt: SKDQLADIMTKPLPAPSF
|
|
| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.8e-49 | 47.81 | Show/hide |
Query: MYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDT
MY+L+YVDDI++ SS+T + L+ QL F +KDLG + YFLGI+++ SGL L+Q KY +L ML K + TP+ ++ K P D
Subjt: MYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDT
Query: TRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWS
+RS+VGALQYL+LTRPDIS+ VN VCQ M PT + +KR+LRY+ TI L + K+S + AF D+DWAG RRST G+ F G N+ISWS
Subjt: TRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWS
Query: SRKQSTVSRSSMEAEYKAVADATAELIW
+++Q TVSRSS E EY+A+A AEL W
Subjt: SRKQSTVSRSSMEAEYKAVADATAELIW
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-144 | 30.13 | Show/hide |
Query: TQIRVELATSKKRDQSAANYFCKIKGLAT---ELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLNSG
TQ+R +L K ++ +Y ++GL T +LA G + D+ + +L L +Y P + + K TL ++ L+ +E+ L ++S
Subjt: TQIRVELATSKKRDQSAANYFCKIKGLAT---ELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLNSG
Query: SSANYTGRAELQLN--LGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDRRGPSARPSCQICGKVGHTAIRC---WHRMDESYQDEPSS-----A
+ T A N ++ N +R + NR + + Q P ++ P CQICG GH+A RC H + +P S
Subjt: SSANYTGRAELQLN--LGSSANYASRGGQQKNRGRRDRGRGRSQGYAPSRPAGDRRGPSARPSCQICGKVGHTAIRC---WHRMDESYQDEPSS-----A
Query: PPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFF
P LA S Y + NW D+GAT HITSD + L++H+ Y GG+ V V +G+++ + HTG + ++T +R L L NIL+V I K+L+SV++ N V
Subjt: PPTALAATSSYKIDPNWYSDTGATDHITSDLDRLAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFF
Query: EFDPWHFSIKDRQSRKSLLNGRCESGLY--PIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSIL------------------------------
EF P F +KD + LL G+ + LY PI S +L S TH+ WHARLGHP+ ++ S++
Subjt: EFDPWHFSIKDRQSRKSLLNGRCESGLY--PIKPSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSIL------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------------------------------------------------RLNNISCA-------------------
+L CA
Subjt: -------------------------------------------------------------------------RLNNISCA-------------------
Query: ----SYSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQ---------STHNALDLCTLHLGN-------------------------S
YS + Y CL + R+Y+SR V FDEN FPF SP + S H L T L S
Subjt: ----SYSSSHKGYKCLDTDSGRVYMSRDVIFDENVFPFKRARPNSSPTMQ---------STHNALDLCTLHLGN-------------------------S
Query: STNLENDHM------------HMSGP---------------TNSLDAENLVSTSASEL------PQQSSASLP-------CESALVVPPMIEASAPPPAD
S+NL++ +GP + + N + S S+L P QSS+S P S PP I PPP
Subjt: STNLENDHM------------HMSGP---------------TNSLDAENLVSTSASEL------PQQSSASLP-------CESALVVPPMIEASAPPPAD
Query: DIA----QCPVESSAAGQPTVVASVAPLATTDTAIPSMWILHLLLIPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLV-SPRAGLNVIDCKW
I Q P+ + + G + P + L + ++ SEP + I A++ WR AM E A N TW LV P + + ++ C+W
Subjt: DIA----QCPVESSAAGQPTVVASVAPLATTDTAIPSMWILHLLLIPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLV-SPRAGLNVIDCKW
Query: VFKLKQKPDGSIDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKS
+F K DGS++RYKARL+ D+ NAFL G L +DVYM QPPGF+D P Y+CKL K+
Subjt: VFKLKQKPDGSIDRYKARLI------------------------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKS
Query: LYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQ
LYGLKQAPRAW+ L + L + F S +D SLF+ + +Y+L+YVDDI+I + T + L L F VKD L YFLGIE + +GL L+Q
Subjt: LYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIFNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQ
Query: HKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLC
+YI DLLART+M+T+K V TPM PS KL L G KL+ D T YR +VG+LQYL+ TRPDIS+ VNR+ QFM PT H +KRILRYL T + +
Subjt: HKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLC
Query: LTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSA
L K +T L A+SDADWAG+ DD ST GY+++ G + ISWSS+KQ V RSS EAEY++VA+ ++E+ WI LL ELGI R ++CDN+GATYL A
Subjt: LTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSA
Query: NPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYF
NP+FH R KH+ +DYHF+R +V + L V +S+ DQLAD +TKPL +F F
Subjt: NPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSKDQLADIMTKPLPAPSFSYF
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.5e-141 | 30.02 | Show/hide |
Query: ELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRG
+LA G + D+ + +L L DY P + + K +L ++ L+ E+ L LNS T N ++ N +RG +
Subjt: ELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMMYEAHQLQHQAELQLNSGSSANYTGRAELQLNLGSSANYASRGGQQKNRG
Query: RRDRGRGRSQGYAPSRPAGDRRGPSA-RPSCQICGKVGHTAIRC--WHRMDESYQDEPSSAPPTA------LAATSSYKIDPNWYSDTGATDHITSDLDR
+R + SR D R P CQIC GH+A RC H+ + + S++P T LA S Y + NW D+GAT HITSD +
Subjt: RRDRGRGRSQGYAPSRPAGDRRGPSA-RPSCQICGKVGHTAIRC--WHRMDESYQDEPSSAPPTA------LAATSSYKIDPNWYSDTGATDHITSDLDR
Query: LAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLY--PIK
L+ H+ Y GG+ V + +G+++ + HTG + + T++RSL L +L+V I K+L+SV++ N V EF P F +KD + LL G+ + LY PI
Subjt: LAVHEHYHGGEQVQVGNGASLRVLHTGHSLINTATRSLALRNILHVIEISKHLLSVHKFSRDNDVFFEFDPWHFSIKDRQSRKSLLNGRCESGLY--PIK
Query: PSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSIL---------------------------------------------------------------
S ++ S++ TH+ WH+RLGHPS ++ S++
Subjt: PSDVDNLKHVLVSRSTTHAQWHARLGHPSSQVVKSIL---------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------RLNNISCA-----------------------SYSSSHKGYKCLDTDSGRVYMSRDVIFDE
+L CA YS + Y CL +GR+Y SR V FDE
Subjt: ----------------------------------------RLNNISCA-----------------------SYSSSHKGYKCLDTDSGRVYMSRDVIFDE
Query: NVFPF----------KRARPNSSPTMQSTHNAL----------------------------DLCTLHLGNSSTNLEND----------------------
FPF + R +S+P S H L LCT + SS+NL +
Subjt: NVFPF----------KRARPNSSPTMQSTHNAL----------------------------DLCTLHLGNSSTNLEND----------------------
Query: --HMHMSGPTNS--LDAENLVSTSA------SELPQQ--SSASLPCESALV----VPPMIEASAPPPADDIAQCPVESSAAGQPTVVASVAPLATTDTAI
H + +NS L+ N S S S LPQ SS +P S + P S PP + P+ A P S+A A
Subjt: --HMHMSGPTNS--LDAENLVSTSA------SELPQQ--SSASLPCESALV----VPPMIEASAPPPADDIAQCPVESSAAGQPTVVASVAPLATTDTAI
Query: PSMWILHLLLIPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLV-SPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI---------------
P+ + + ++ SEP + I AM+ WRQAM E A N TW LV P + ++ C+W+F K DGS++RYKARL+
Subjt: PSMWILHLLLIPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLV-SPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI---------------
Query: ---------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFI
D+ NAFL G L ++VYM QPPGFVD P Y+C+L K++YGLKQAPRAW+ L + L + F S +D SLF+
Subjt: ---------------------------DIQNAFLHGFLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFI
Query: FNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGK
+ +Y+L+YVDDI+I + + ++ L L F VK+ L YFLGIE + GL L+Q +Y DLLART+MLT+K V TPM S KL L+ G
Subjt: FNKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGK
Query: KLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFG
KL D T YR +VG+LQYL+ TRPD+S+ VNR+ Q+M PT HW +KR+LRYL T D + L K +T L A+SDADWAG+ DD ST GY+++ G
Subjt: KLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFG
Query: GNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSK
+ ISWSS+KQ V RSS EAEY++VA+ ++EL WI LL ELGI + ++CDN+GATYL ANP+FH R KH+ +DYHF+R +V + L V +S+
Subjt: GNLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRVISSK
Query: DQLADIMTKPLPAPSFSYFRRHLNLV
DQLAD +TKPL +F F R + ++
Subjt: DQLADIMTKPLPAPSFSYFRRHLNLV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.0e-92 | 38.35 | Show/hide |
Query: ILHLLLIPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI--------------------
+ H L+ + A EP+++ A E +W AM+DE A++ TW + + I CKWV+K+K DG+I+RYKARL+
Subjt: ILHLLLIPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI--------------------
Query: ----------------------DIQNAFLHGFLNEDVYMKQPPGFV----DSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIF
DI NAFL+G L+E++YMK PPG+ DS P +C L KS+YGLKQA R WF + S + F S +D + F+
Subjt: ----------------------DIQNAFLHGFLNEDVYMKQPPGFV----DSQHPGYLCKLDKSLYGLKQAPRAWFSRLSSKQLQLDFTPSKADVSLFIF
Query: NKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKK
+ + +L+YVDDIII S++ A+++L +QL+ F ++DLG L YFLG+E+ +++G+ + Q KY DLL T +L K PM PS + G
Subjt: NKTGIQMYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKK
Query: LSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGG
D YR ++G L YL +TR DISF VN++ QF +P H V +IL Y+ T+ L + + L FSDA + D RRST GY +F G
Subjt: LSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGG
Query: NLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRER
+LISW S+KQ VS+SS EAEY+A++ AT E++W+ REL + ++ L+CDN A +++ N +FH RTKH+E D H VRER
Subjt: NLISWSSRKQSTVSRSSMEAEYKAVADATAELIWIQVLLRELGISQARARSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRER
|
|
| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 2.6e-11 | 41.56 | Show/hide |
Query: YLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGY
YL++TRPD++F VNR+ QF S+ + V ++L Y+ T+ L + +S L AF+D+DWA PD RRS G+
Subjt: YLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGY
|
|
| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.3e-50 | 47.81 | Show/hide |
Query: MYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDT
MY+L+YVDDI++ SS+T + L+ QL F +KDLG + YFLGI+++ SGL L+Q KY +L ML K + TP+ ++ K P D
Subjt: MYILIYVDDIIIISSSSTAIEKLLTQLQDDFVVKDLGLLSYFLGIEVRHTSSGLILTQHKYIRDLLARTDMLTSKGVPTPMLPSEKLLLNGGKKLSPEDT
Query: TRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWS
+RS+VGALQYL+LTRPDIS+ VN VCQ M PT + +KR+LRY+ TI L + K+S + AF D+DWAG RRST G+ F G N+ISWS
Subjt: TRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWATVKRILRYLHDTIDMSLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWS
Query: SRKQSTVSRSSMEAEYKAVADATAELIW
+++Q TVSRSS E EY+A+A AEL W
Subjt: SRKQSTVSRSSMEAEYKAVADATAELIW
|
|
| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8e-15 | 50 | Show/hide |
Query: LLIPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI
L I + EP S I A++ P W QAM +E AL +NKTW LV P N++ CKWVFK K DG++DR KARL+
Subjt: LLIPRSSASEPTSHIIAMEHPLWRQAMNDEFQALQKNKTWHLVSPRAGLNVIDCKWVFKLKQKPDGSIDRYKARLI
|
|
