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CmoCh05G011880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G011880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncingulin
Genome locationCmo_Chr05:9319552..9320438
RNA-Seq ExpressionCmoCh05G011880
SyntenyCmoCh05G011880
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063670.1 cingulin [Cucumis melo var. makuwa]1.0e-0661.02Show/hide
Query:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
        K E+ E    E  HK  EEMQPFVEHLDAI TSFTNK K VEEM R LETE+ ++ + K
Subjt:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
KAG6599277.1 hypothetical protein SDJN03_09055, partial [Cucurbita argyrosperma subsp. sororia]6.5e-2288.89Show/hide
Query:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGKWWKK
        KA +    +KEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGKWWKK
Subjt:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGKWWKK
XP_008455286.1 PREDICTED: cingulin [Cucumis melo]1.0e-0661.02Show/hide
Query:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
        K E+ E    E  HK  EEMQPFVEHLDAI TSFTNK K VEEM R LETE+ ++ + K
Subjt:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
XP_011648795.1 desmoplakin [Cucumis sativus]3.8e-0659.32Show/hide
Query:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
        K E+ E+   E  HK  +EMQPFVEHLDAI TSFTNK K VEEM R LETE+ ++ + K
Subjt:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
XP_038889361.1 paramyosin-like [Benincasa hispida]5.7e-1067.8Show/hide
Query:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
        K E+ E      GHK VEE+QPFVEHLDAI TSFTNK KMVEEMKRQLE E+A+E + K
Subjt:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
TrEMBL top hitse value%identityAlignment
A0A0A0LII4 Uncharacterized protein1.9e-0659.32Show/hide
Query:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
        K E+ E+   E  HK  +EMQPFVEHLDAI TSFTNK K VEEM R LETE+ ++ + K
Subjt:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
A0A1S3C0Q0 cingulin4.9e-0761.02Show/hide
Query:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
        K E+ E    E  HK  EEMQPFVEHLDAI TSFTNK K VEEM R LETE+ ++ + K
Subjt:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
A0A5D3D489 Cingulin4.9e-0761.02Show/hide
Query:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
        K E+ E    E  HK  EEMQPFVEHLDAI TSFTNK K VEEM R LETE+ ++ + K
Subjt:  KAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGK
A0A6J1DBU6 myosin-2 heavy chain, non muscle-like8.6e-0471.43Show/hide
Query:  QPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKE
        +PFVEHL+AI TSFTNK KMVEEMK +LET + +E
Subjt:  QPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCAAGAGGTAATGGGTGAGTTGAGAGATGCTTGGGACGAGATTCAAATGGTGGAAATGGATGGATTGAAGGCTGAGATTAATGAACTTGTTTTGAAGGAGAAGGG
GCACAAGTTTGTAGAAGAAATGCAGCCCTTTGTTGAACATTTGGATGCAATAAACACATCCTTCACAAACAAGGGAAAAATGGTGGAAGAAATGAAGCGACAACTCGAGA
CCGAACAAGCCAAGGAATGGAGAGGAAAATGGTGGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCAAGAGGTAATGGGTGAGTTGAGAGATGCTTGGGACGAGATTCAAATGGTGGAAATGGATGGATTGAAGGCTGAGATTAATGAACTTGTTTTGAAGGAGAAGGG
GCACAAGTTTGTAGAAGAAATGCAGCCCTTTGTTGAACATTTGGATGCAATAAACACATCCTTCACAAACAAGGGAAAAATGGTGGAAGAAATGAAGCGACAACTCGAGA
CCGAACAAGCCAAGGAATGGAGAGGAAAATGGTGGAAGAAATGA
Protein sequenceShow/hide protein sequence
MWQEVMGELRDAWDEIQMVEMDGLKAEINELVLKEKGHKFVEEMQPFVEHLDAINTSFTNKGKMVEEMKRQLETEQAKEWRGKWWKK