; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G012010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G012010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSialidase-like isoform X3
Genome locationCmo_Chr05:9405268..9405915
RNA-Seq ExpressionCmoCh05G012010
SyntenyCmoCh05G012010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33904.1 hypothetical protein [Cucumis melo subsp. melo]1.1e-4956.48Show/hide
Query:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH
        MADFRYGFF RPDNK +E   EEK+   HI +PK KP +LD GGR+ PT +LPR RYVT  E +TEE            HTK  EP+K    + DKG   
Subjt:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH

Query:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRA
         S  A+N+  EFN+LL K + E    K+EMR +S+PMNDI KAIE  KEAVNL   KNNAC A  H  KD  TKTIDS EAARR+G FG    V SAN A
Subjt:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRA

Query:  TINCKEAARKYKGVTV
        TINCKEAARKY G  V
Subjt:  TINCKEAARKYKGVTV

KAA0063635.1 hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa]3.7e-5056.94Show/hide
Query:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH
        MADFRYGFF RPDNK +E   EEK+   HI +PK KP +LDAGGR+ PT +LPR RYVT  E +TEE            HTK  EP+K    + DKG   
Subjt:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH

Query:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRA
         S  A+N+  EFN+LL K + E    K+EMR +S+PMNDI KAIE  KEAVNL   KNNAC A  H  KD  TKTIDS EAARR+G FG    V SAN A
Subjt:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRA

Query:  TINCKEAARKYKGVTV
        TINCKEAARKY G  V
Subjt:  TINCKEAARKYKGVTV

KAG6599284.1 putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia]9.8e-12099.05Show/hide
Query:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH
        MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAH+DAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH
Subjt:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH

Query:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRAT
        PSRPALNRPTEFNRLLVKVEMEEDQVKHEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSAN AT
Subjt:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRAT

Query:  INCKEAARKYK
        INCKEAARKYK
Subjt:  INCKEAARKYK

KAG7969012.1 hypothetical protein I3843_07G008900 [Carya illinoinensis]4.1e-0927.8Show/hide
Query:  DPKYKPAHLDAGGRRLPTVVLP----RPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYG---------------LHHDKGIRHPSRPALNRPTEF
        D   +P  +DA GR +P +V      +  Y+  T    E   +    G+ +     ++P+K+YG               ++ D   R  S PA +RP E 
Subjt:  DPKYKPAHLDAGGRRLPTVVLP----RPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYG---------------LHHDKGIRHPSRPALNRPTEF

Query:  NRLLVKVEME-----------EDQVKHEMRISKPMNDIEKAIEFFKEA------VNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGV---PPP
           L KV+ E               +++ ++  P +DI  A+E  KEA       N+P            PK+D Y  TIDS EAARR+GN  +   P  
Subjt:  NRLLVKVEME-----------EDQVKHEMRISKPMNDIEKAIEFFKEA------VNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGV---PPP

Query:  VPSANRATINCKEAARKYKGVTV
              ATI+ +EAA++Y G ++
Subjt:  VPSANRATINCKEAARKYKGVTV

KGN60838.1 hypothetical protein Csa_019431 [Cucumis sativus]1.2e-4855.76Show/hide
Query:  MADFRYGFFCRPDNKNLEPQQEE-KNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIR
        MADFRYGFF RPDNK +E    E K+   HI DPK KP +LDAGGR+ P  +LPR RYVT  E YTEE            HTK  EPVK    + DKG  
Subjt:  MADFRYGFFCRPDNKNLEPQQEE-KNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIR

Query:  HPSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANR
        + S  A+N+  EFN+LL  V+ E    K+EMR +S+PM DI KAIE  KE VNL   KNNAC A    +KD  TKTIDS EAARR+G FG P PV +AN 
Subjt:  HPSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANR

Query:  ATINCKEAARKYKGVTV
        ATI+CKEAARKY G  V
Subjt:  ATINCKEAARKYKGVTV

TrEMBL top hitse value%identityAlignment
A0A0A0LG87 Uncharacterized protein5.7e-4955.76Show/hide
Query:  MADFRYGFFCRPDNKNLEPQQEE-KNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIR
        MADFRYGFF RPDNK +E    E K+   HI DPK KP +LDAGGR+ P  +LPR RYVT  E YTEE            HTK  EPVK    + DKG  
Subjt:  MADFRYGFFCRPDNKNLEPQQEE-KNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIR

Query:  HPSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANR
        + S  A+N+  EFN+LL  V+ E    K+EMR +S+PM DI KAIE  KE VNL   KNNAC A    +KD  TKTIDS EAARR+G FG P PV +AN 
Subjt:  HPSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANR

Query:  ATINCKEAARKYKGVTV
        ATI+CKEAARKY G  V
Subjt:  ATINCKEAARKYKGVTV

A0A0D2W7V1 Uncharacterized protein2.9e-0843.82Show/hide
Query:  HEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGV-PPPVPSANRATINCKEAARKYKGVTV
        HE  +S+P ++I  A+E+ KEAV            P  P+ DGY  TIDS EA R++G   V  PP+ S  R TI+ +EAARKY+G  V
Subjt:  HEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGV-PPPVPSANRATINCKEAARKYKGVTV

A0A1U8KUC0 uncharacterized protein LOC1079207152.2e-0843.82Show/hide
Query:  HEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGV-PPPVPSANRATINCKEAARKYKGVTV
        HE  +S+P ++I  A+E+ KEAV            P  P+ DGY  TIDS EA R++G+  V  PP+ S  R TI+ +EAARKY+G  V
Subjt:  HEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGV-PPPVPSANRATINCKEAARKYKGVTV

A0A5A7VCJ6 Uncharacterized protein1.8e-5056.94Show/hide
Query:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH
        MADFRYGFF RPDNK +E   EEK+   HI +PK KP +LDAGGR+ PT +LPR RYVT  E +TEE            HTK  EP+K    + DKG   
Subjt:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH

Query:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRA
         S  A+N+  EFN+LL K + E    K+EMR +S+PMNDI KAIE  KEAVNL   KNNAC A  H  KD  TKTIDS EAARR+G FG    V SAN A
Subjt:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRA

Query:  TINCKEAARKYKGVTV
        TINCKEAARKY G  V
Subjt:  TINCKEAARKYKGVTV

E5GBR2 Uncharacterized protein5.2e-5056.48Show/hide
Query:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH
        MADFRYGFF RPDNK +E   EEK+   HI +PK KP +LD GGR+ PT +LPR RYVT  E +TEE            HTK  EP+K    + DKG   
Subjt:  MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRH

Query:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRA
         S  A+N+  EFN+LL K + E    K+EMR +S+PMNDI KAIE  KEAVNL   KNNAC A  H  KD  TKTIDS EAARR+G FG    V SAN A
Subjt:  PSRPALNRPTEFNRLLVKVEMEEDQVKHEMR-ISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRA

Query:  TINCKEAARKYKGVTV
        TINCKEAARKY G  V
Subjt:  TINCKEAARKYKGVTV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTTTCGATATGGTTTCTTTTGTCGCCCCGACAACAAGAACTTAGAACCACAACAGGAAGAAAAGAACACAACAAGCCATATCCCTGATCCCAAATACAAACC
AGCTCATCTCGATGCCGGAGGAAGACGACTTCCTACCGTCGTTCTGCCCAGACCAAGGTATGTTACTACAACTGAGACATATACTGAAGAATTCTACTCAAATTCAAGGG
ATGGCTTTCAATATAGCCATACCAAGAACTCTGAACCAGTGAAGTCTTATGGACTTCACCATGATAAAGGGATTCGGCATCCAAGTCGCCCCGCTCTTAATCGCCCAACA
GAGTTCAATAGACTCTTAGTCAAAGTCGAAATGGAAGAAGACCAGGTAAAACATGAAATGAGGATAAGTAAACCAATGAATGATATTGAGAAGGCTATAGAGTTCTTTAA
AGAAGCTGTAAACCTTCCCTATTGCAAAAACAATGCTTGTCACGCACCAGATCATCCTAAGAAAGATGGCTACACAAAAACTATTGACAGCAATGAAGCAGCACGTCGGT
TCGGGAACTTCGGCGTACCACCTCCGGTGCCGAGTGCCAACAGAGCGACCATTAACTGCAAAGAGGCTGCAAGGAAGTATAAAGGTGTAACAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATTTTCGATATGGTTTCTTTTGTCGCCCCGACAACAAGAACTTAGAACCACAACAGGAAGAAAAGAACACAACAAGCCATATCCCTGATCCCAAATACAAACC
AGCTCATCTCGATGCCGGAGGAAGACGACTTCCTACCGTCGTTCTGCCCAGACCAAGGTATGTTACTACAACTGAGACATATACTGAAGAATTCTACTCAAATTCAAGGG
ATGGCTTTCAATATAGCCATACCAAGAACTCTGAACCAGTGAAGTCTTATGGACTTCACCATGATAAAGGGATTCGGCATCCAAGTCGCCCCGCTCTTAATCGCCCAACA
GAGTTCAATAGACTCTTAGTCAAAGTCGAAATGGAAGAAGACCAGGTAAAACATGAAATGAGGATAAGTAAACCAATGAATGATATTGAGAAGGCTATAGAGTTCTTTAA
AGAAGCTGTAAACCTTCCCTATTGCAAAAACAATGCTTGTCACGCACCAGATCATCCTAAGAAAGATGGCTACACAAAAACTATTGACAGCAATGAAGCAGCACGTCGGT
TCGGGAACTTCGGCGTACCACCTCCGGTGCCGAGTGCCAACAGAGCGACCATTAACTGCAAAGAGGCTGCAAGGAAGTATAAAGGTGTAACAGTGTGA
Protein sequenceShow/hide protein sequence
MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHLDAGGRRLPTVVLPRPRYVTTTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRHPSRPALNRPT
EFNRLLVKVEMEEDQVKHEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEAARRFGNFGVPPPVPSANRATINCKEAARKYKGVTV