; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G012270 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G012270
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationCmo_Chr05:9599597..9600197
RNA-Seq ExpressionCmoCh05G012270
SyntenyCmoCh05G012270
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599311.1 hypothetical protein SDJN03_09089, partial [Cucurbita argyrosperma subsp. sororia]5.2e-7799.3Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHL VNYEFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

KAG7030310.1 hypothetical protein SDJN02_08657, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-7296.38Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        MDK  FLMLLAL LGILSLANAQS NNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYE
        RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNY+
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYE

XP_022946138.1 pathogenesis-related protein P2-like [Cucurbita moschata]8.0e-78100Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

XP_022999103.1 pathogenesis-related protein P2-like [Cucurbita maxima]1.3e-7293.66Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        MDK  FLMLLAL LGILSL NAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTET+ASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        RIVDQCSNGGLDLDVNVFRRIDTN NGY+RGHLIV YEFV+C
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

XP_023521169.1 pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo]7.7e-7393.66Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        MDK  FLMLLAL LGILSLANAQSA NVRATYHLYNPQDINWDYLRASV+CATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTET+ASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        RIVDQCSNGGLDLDVNVFRRIDTN NGY+RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

TrEMBL top hitse value%identityAlignment
A0A5D3D4G8 Pathogenesis-related protein PR-4-like6.8e-6785.92Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        M+K S +M+L L LG+LSLANAQSA NVRATYHLYNPQDINWDYLRASV+CATWDANKPLE+RRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVFRRIDTN NG  RGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like5.6e-6988.03Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        M+K S LM+LAL LG+LSLANAQSANNVRATYHLYNPQDINWDYLRASV+CATWDANKP+E+RR+YGWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTN NG  RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

A0A6J1G2Z1 pathogenesis-related protein P2-like3.9e-78100Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like6.6e-7089.44Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        M+K SFLM+LAL LGILSLANAQSANNVRATYHLYNPQDINWDYLRASV+CATWDANKP+E+RR+YGWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTN NG  RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

A0A6J1KIN7 pathogenesis-related protein P2-like6.4e-7393.66Show/hide
Query:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        MDK  FLMLLAL LGILSL NAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTET+ASEIV
Subjt:  MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        RIVDQCSNGGLDLDVNVFRRIDTN NGY+RGHLIV YEFV+C
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN11.0e-5173.95Show/hide
Query:  SANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S YC+TWDANKPL +R++YGWTAFCGPVGPRG+ SCG+CLRVTNT T A   VRIVDQCSNGGLDLDVNVFR+IDT
Subjt:  SANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDVNVFRRIDT

Query:  NRNGYQRGHLIVNYEFVNC
        + NG  +GHLIVNY+FV+C
Subjt:  NRNGYQRGHLIVNYEFVNC

P09762 Wound-induced protein WIN23.3e-5072.27Show/hide
Query:  SANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S YC+TWDANKP  +R +YGWTAFCGPVGPRG+ SCG+CLRVTNT T A   VRIVDQCSNGGLDLD+NVF++IDT
Subjt:  SANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDVNVFRRIDT

Query:  NRNGYQRGHLIVNYEFVNC
        +  G Q+GHLIVNY+FVNC
Subjt:  NRNGYQRGHLIVNYEFVNC

P29062 Pathogenesis-related protein PR-4A1.7e-5471.43Show/hide
Query:  LALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNG
        L ++  ++++A AQSA NVR+TYHLYNPQ+INWD   AS +CATWDA+KPL +R++YGWTAFCGP GPRGQ SCGRCLRVTNT T     VRIVDQCSNG
Subjt:  LALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNG

Query:  GLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        GLDLDVNVF ++DTN  GYQ+GHL VNYEFVNC
Subjt:  GLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

P29063 Pathogenesis-related protein PR-4B1.3e-5472.18Show/hide
Query:  LALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNG
        L ++  ++++A AQSA NVR+TYHLYNPQ+INWD   AS +CATWDA+KPL +R++YGWTAFCGP GPRGQ SCGRCLRVTNT T     VRIVDQCSNG
Subjt:  LALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNG

Query:  GLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC
        GLDLDVNVF ++DTN  GYQ+GHLIVNYEFVNC
Subjt:  GLDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC

P32045 Pathogenesis-related protein P26.2e-5779.53Show/hide
Query:  ILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDV
        ++++A AQSA NVRATYHLYNPQ+INWD   ASVYCATWDA+KPLE+RRRYGWTAFCGP GP GQASCGRCLRVTNT T   E VRIVDQC NGGLDLDV
Subjt:  ILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDV

Query:  NVFRRIDTNRNGYQRGHLIVNYEFVNC
        NVF R+DTN  GYQRG+L VNYEFVNC
Subjt:  NVFRRIDTNRNGYQRGHLIVNYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 44.9e-4969.17Show/hide
Query:  QSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDVNVFRRID
        +SA+NVRATYH YNP   NWD    S YC+TWDA+KP  +R +YGWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQCSNGGLDLDV +F +ID
Subjt:  QSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGGLDLDVNVFRRID

Query:  TNRNGYQRGHLIVNYEFVNC
        T+  GYQ+GHLIV+Y+FV+C
Subjt:  TNRNGYQRGHLIVNYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAACGAAGCTTTTTGATGCTATTGGCGTTGGTTTTGGGCATATTGAGCTTGGCTAATGCTCAAAGTGCCAACAATGTGAGGGCTACTTACCATTTGTACAACCC
ACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTATTGCGCAACATGGGACGCCAACAAGCCCTTGGAGTTTCGCCGCCGCTACGGTTGGACCGCCTTCTGTGGCC
CTGTTGGCCCTCGTGGTCAAGCTTCCTGTGGTCGTTGTTTGAGGGTGACTAACACTGAAACAAGAGCTTCGGAAATAGTGAGAATTGTCGATCAATGCTCTAATGGAGGG
CTGGATTTGGATGTGAACGTGTTTAGGAGAATCGATACTAACAGAAATGGATACCAGCGTGGCCATCTTATTGTCAACTATGAGTTTGTTAACTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAACGAAGCTTTTTGATGCTATTGGCGTTGGTTTTGGGCATATTGAGCTTGGCTAATGCTCAAAGTGCCAACAATGTGAGGGCTACTTACCATTTGTACAACCC
ACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTATTGCGCAACATGGGACGCCAACAAGCCCTTGGAGTTTCGCCGCCGCTACGGTTGGACCGCCTTCTGTGGCC
CTGTTGGCCCTCGTGGTCAAGCTTCCTGTGGTCGTTGTTTGAGGGTGACTAACACTGAAACAAGAGCTTCGGAAATAGTGAGAATTGTCGATCAATGCTCTAATGGAGGG
CTGGATTTGGATGTGAACGTGTTTAGGAGAATCGATACTAACAGAAATGGATACCAGCGTGGCCATCTTATTGTCAACTATGAGTTTGTTAACTGCTAAGTTTCTTTCTT
TCGGAAAGAAGGGAGAAACGAAAAACTATGTTTTAATGAATAAACTATGAATAAAGTACGAACAGTTTAATATATCG
Protein sequenceShow/hide protein sequence
MDKRSFLMLLALVLGILSLANAQSANNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCSNGG
LDLDVNVFRRIDTNRNGYQRGHLIVNYEFVNC