; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G012280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G012280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationCmo_Chr05:9603088..9603837
RNA-Seq ExpressionCmoCh05G012280
SyntenyCmoCh05G012280
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599312.1 hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sororia]1.2e-7698.59Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        MEKVS LMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETG+SEIV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]1.1e-7192.25Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        MEK SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]1.8e-77100Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]4.4e-7697.89Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        MEK S LMILALALG+LSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]5.5e-7190.14Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        MEK SI+MIL LALGVLS+ANAQSANNVRATYHLYNPQ+INWDYLRASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGAS IV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVFK++DTNGNG FRGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein6.0e-7191.55Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        M K SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG  RGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like5.4e-7292.25Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        MEK SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like5.4e-7292.25Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        MEK SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like8.6e-78100Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like2.1e-7697.89Show/hide
Query:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        MEK S LMILALALG+LSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN12.4e-5373.95Show/hide
Query:  SANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDT
        SA NVRATYH+YNPQ++ WD    S +C+TWDANKP+ WR++YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQC+NGGLDLDVNVF++IDT
Subjt:  SANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDT

Query:  NGNGVFRGHLIVNYQFVNC
        +GNG  +GHLIVNYQFV+C
Subjt:  NGNGVFRGHLIVNYQFVNC

P09762 Wound-induced protein WIN21.3e-5173.11Show/hide
Query:  SANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDT
        SA NVRATYH+YNPQ++ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQC+NGGLDLD+NVF++IDT
Subjt:  SANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDT

Query:  NGNGVFRGHLIVNYQFVNC
        +G G  +GHLIVNYQFVNC
Subjt:  NGNGVFRGHLIVNYQFVNC

P29062 Pathogenesis-related protein PR-4A1.3e-5467.59Show/hide
Query:  MEKVS---ILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGAS
        ME+V+   + + L +   V+++A AQSA NVR+TYHLYNPQ+INWD   AS FCATWDA+KP+ WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG  
Subjt:  MEKVS---ILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGAS

Query:  EIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
          VRIVDQC+NGGLDLDVNVF ++DTNG G  +GHL VNY+FVNC
Subjt:  EIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

P29063 Pathogenesis-related protein PR-4B7.6e-5567.59Show/hide
Query:  MEKVS---ILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGAS
        ME+V+   + + L +   ++++A AQSA NVR+TYHLYNPQ+INWD   AS FCATWDA+KP+ WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG  
Subjt:  MEKVS---ILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGAS

Query:  EIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
          VRIVDQC+NGGLDLDVNVF ++DTNG G  +GHLIVNY+FVNC
Subjt:  EIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

P32045 Pathogenesis-related protein P21.4e-5671.33Show/hide
Query:  MEKVSILMILALALG-VLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEI
        ME+V+ L +    +  ++++A AQSA NVRATYHLYNPQ+INWD   ASV+CATWDA+KP+EWRR+YGWTAFCGP GP GQASCGRCLRVTNT TG  E 
Subjt:  MEKVSILMILALALG-VLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEI

Query:  VRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
        VRIVDQC NGGLDLDVNVF R+DTNG G  RG+L VNY+FVNC
Subjt:  VRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 41.1e-4868.33Show/hide
Query:  QSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRID
        +SA+NVRATYH YNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +ID
Subjt:  QSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRID

Query:  TNGNGVFRGHLIVNYQFVNC
        T+G G  +GHLIV+YQFV+C
Subjt:  TNGNGVFRGHLIVNYQFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGTGAGCATTTTGATGATATTGGCTTTGGCTTTGGGCGTTTTGAGCTTGGCTAATGCTCAAAGTGCCAACAATGTGAGGGCTACTTACCATTTGTATAACCC
ACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCAACAAGCCCATCGAGTGGCGTCGTCAGTACGGTTGGACCGCCTTCTGTGGCC
CTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGCTTGAGGGTCACTAACACTGAAACAGGAGCTTCAGAAATTGTGAGAATCGTTGATCAATGTGCCAATGGAGGG
CTGGATTTGGATGTGAATGTGTTTAAGAGAATCGACACCAATGGAAATGGAGTCTTCCGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
TCAAGAAAGAAAATAATGGAGAAAGTGAGCATTTTGATGATATTGGCTTTGGCTTTGGGCGTTTTGAGCTTGGCTAATGCTCAAAGTGCCAACAATGTGAGGGCTACTTA
CCATTTGTATAACCCACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCAACAAGCCCATCGAGTGGCGTCGTCAGTACGGTTGGA
CCGCCTTCTGTGGCCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGCTTGAGGGTCACTAACACTGAAACAGGAGCTTCAGAAATTGTGAGAATCGTTGATCAA
TGTGCCAATGGAGGGCTGGATTTGGATGTGAATGTGTTTAAGAGAATCGACACCAATGGAAATGGAGTCTTCCGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTG
CTAAGATTTTTCTTTCGGTTTATTCTTCCTAGAAGAAGAAAGAAAGAATATCACGTTCTAATAAATAAAGTATGAACAATAAACTATGAATTCGAGGTTTCTTGAATTTA
TGAACTTTTTTTTTTATAATGGTACCACCATCTTTGAAAGTTAAGAAATGCATTAAATCTCTTATAAATCGTGCGTAACGTGATTGTGTTCATAACTATTTACGTTCATT
ATAG
Protein sequenceShow/hide protein sequence
MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGG
LDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC