; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G012430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G012430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box protein At5g49610-like
Genome locationCmo_Chr05:9671854..9672405
RNA-Seq ExpressionCmoCh05G012430
SyntenyCmoCh05G012430
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022946872.1 F-box protein At5g49610-like [Cucurbita moschata]2.7e-102100Show/hide
Query:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC
        MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC
Subjt:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC

Query:  VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
        VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
Subjt:  VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV

XP_022999086.1 F-box protein At3g08750-like [Cucurbita maxima]6.7e-4559.34Show/hide
Query:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVCV
        EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNS ++NHIFLKRIVEID DKDK+                                         
Subjt:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVCV

Query:  ADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
                       TREFRKLPPSIFPV TITDASPRPI YELIM A   G     YD NSRDFKVVR+VDIVGLRRGYPV
Subjt:  ADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV

XP_023545392.1 F-box protein At5g49610-like [Cucurbita pepo subsp. pepo]1.4e-9092.35Show/hide
Query:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC
        MEILSWLPPETLL FKSVHKSWYALINDPKFILKHF NSPQYNHIFLKRIVEIDYDKDKS FSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC
Subjt:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC

Query:  VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
        VADVMNVSNVFLCNPATREFRKLPPSIFPV TITDASPRPICYELIMQA   G     YD NSRDFKVVRVVDIVGLRR YPV
Subjt:  VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV

XP_023546853.1 F-box/kelch-repeat protein At3g06240-like isoform X1 [Cucurbita pepo subsp. pepo]5.9e-4978.2Show/hide
Query:  VEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVCVADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQAS
        +EI  DKDK  FSILNFSLDPY  +LDIDLSDYQYSQ+FEIHGHSH ++CVAD + +SNVFLCNPATREFRKLPPSIFPV TITDASPRPI YELIM A 
Subjt:  VEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVCVADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQAS

Query:  DLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
          G     YD NSRDFKVVR+VDIVGLRRGYPV
Subjt:  DLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV

XP_023546854.1 F-box/kelch-repeat protein At3g06240-like isoform X2 [Cucurbita pepo subsp. pepo]5.9e-4978.2Show/hide
Query:  VEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVCVADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQAS
        +EI  DKDK  FSILNFSLDPY  +LDIDLSDYQYSQ+FEIHGHSH ++CVAD + +SNVFLCNPATREFRKLPPSIFPV TITDASPRPI YELIM A 
Subjt:  VEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVCVADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQAS

Query:  DLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
          G     YD NSRDFKVVR+VDIVGLRRGYPV
Subjt:  DLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV

TrEMBL top hitse value%identityAlignment
A0A5A7UHP3 F-box protein CPR30-like4.7e-3650.85Show/hide
Query:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILN--FSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCM
        +EILS LPPE+LLRFK V KSWYAL NDPKF  KHF  S Q+ H+ LKR+V  D  K ++ FSIL    S+   L + DIDL  ++  ++FEIHGHSH +
Subjt:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILN--FSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCM

Query:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIV
        +C+ D+    ++FLCNP+TREF +LPPSI     + + S  P  Y+    A   G     YD  SRDFKVVRVVD V
Subjt:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIV

A0A5D3DPN6 F-box protein CPR30-like4.7e-3650.85Show/hide
Query:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILN--FSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCM
        +EILS LPPE+LLRFK V KSWYAL NDPKF  KHF  S Q+ H+ LKR+V  D  K ++ FSIL    S+   L + DIDL  ++  ++FEIHGHSH +
Subjt:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILN--FSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCM

Query:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIV
        +C+ D+    ++FLCNP+TREF +LPPSI     + + S  P  Y+    A   G     YD  SRDFKVVRVVD V
Subjt:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIV

A0A6J1G2T3 putative F-box/LRR-repeat protein At3g165554.4e-4256.83Show/hide
Query:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC
        MEILSWLPPETLLRFKSVHKSWYALI+DPKFILKHF NS ++NHIFLKR +EI  +KDK                                         
Subjt:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC

Query:  VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
                       ATREFRKLPPSIFPV TITDASPRPI YELIM A   G     YD NSRDFKVVR+VDIVGLRRGYPV
Subjt:  VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV

A0A6J1G4V2 F-box protein At5g49610-like1.3e-102100Show/hide
Query:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC
        MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC
Subjt:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC

Query:  VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
        VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
Subjt:  VADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV

A0A6J1KC42 F-box protein At3g08750-like3.3e-4559.34Show/hide
Query:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVCV
        EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNS ++NHIFLKRIVEID DKDK+                                         
Subjt:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVCV

Query:  ADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV
                       TREFRKLPPSIFPV TITDASPRPI YELIM A   G     YD NSRDFKVVR+VDIVGLRRGYPV
Subjt:  ADVMNVSNVFLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV

SwissProt top hitse value%identityAlignment
Q9C9Y4 F-box protein At3g087501.1e-0527.61Show/hide
Query:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHC---M
        EIL  +P E+L+RFKS  K WY LI + +F+  H       +H   +R +   YD+           +DP   +L   L   ++   + I+   HC   M
Subjt:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHC---M

Query:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVYT
        +C     + +++ + NP  RE + + PS+  ++T
Subjt:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVYT

Q9FGY4 F-box protein At5g496105.8e-0730.16Show/hide
Query:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC
        ++IL+ LP ++L RFKSV KSWY L +D  F       +  +N + +K  + +    D S+       +D    V ++ L   +      I   S+ ++C
Subjt:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC

Query:  VADVMNVSNVFLCNPATREFRKLPPS
         + +      ++CNP+TRE+RKLP S
Subjt:  VADVMNVSNVFLCNPATREFRKLPPS

Q9LPW2 Putative F-box/kelch-repeat protein At1g128702.1e-0427.07Show/hide
Query:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKS-TFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHC--M
        EI   LP + L+RFKS+ K W + +    F  +H L   + +H+   +++ I    +     S    SL+   F L   L ++    +  I+    C  +
Subjt:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKS-TFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHC--M

Query:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVY
         C+       ++++ NPATR FR+LPP+ F ++
Subjt:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVY

Q9S9V1 Putative F-box only protein 151.2e-0428.36Show/hide
Query:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILN-----FSLDPYLFVLDIDLSDYQYSQYFEIHGHSH
        EIL   P E+L RFKS  K WY +I   +F+  H  +SP+       R + ID   D  T  I++     FS  P   V D+  S + ++      G   
Subjt:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILN-----FSLDPYLFVLDIDLSDYQYSQYFEIHGHSH

Query:  CMVCVA-----DVMNVSNVFLCNPATREFRKLPP
         M+C+      +    +N+ + NP T++ + + P
Subjt:  CMVCVA-----DVMNVSNVFLCNPATREFRKLPP

Arabidopsis top hitse value%identityAlignment
AT1G12870.1 F-box and associated interaction domains-containing protein1.5e-0527.07Show/hide
Query:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKS-TFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHC--M
        EI   LP + L+RFKS+ K W + +    F  +H L   + +H+   +++ I    +     S    SL+   F L   L ++    +  I+    C  +
Subjt:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKS-TFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHC--M

Query:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVY
         C+       ++++ NPATR FR+LPP+ F ++
Subjt:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVY

AT3G08750.1 F-box and associated interaction domains-containing protein7.8e-0727.61Show/hide
Query:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHC---M
        EIL  +P E+L+RFKS  K WY LI + +F+  H       +H   +R +   YD+           +DP   +L   L   ++   + I+   HC   M
Subjt:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHC---M

Query:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVYT
        +C     + +++ + NP  RE + + PS+  ++T
Subjt:  VCVADVMNVSNVFLCNPATREFRKLPPSIFPVYT

AT3G16580.1 F-box and associated interaction domains-containing protein9.5e-0561.76Show/hide
Query:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKH
        EILS +PPE+LLRFK+V K W AL  D  FI  H
Subjt:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKH

AT4G04690.1 F-box and associated interaction domains-containing protein8.6e-0628.36Show/hide
Query:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILN-----FSLDPYLFVLDIDLSDYQYSQYFEIHGHSH
        EIL   P E+L RFKS  K WY +I   +F+  H  +SP+       R + ID   D  T  I++     FS  P   V D+  S + ++      G   
Subjt:  EILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILN-----FSLDPYLFVLDIDLSDYQYSQYFEIHGHSH

Query:  CMVCVA-----DVMNVSNVFLCNPATREFRKLPP
         M+C+      +    +N+ + NP T++ + + P
Subjt:  CMVCVA-----DVMNVSNVFLCNPATREFRKLPP

AT5G49610.1 F-box family protein4.1e-0830.16Show/hide
Query:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC
        ++IL+ LP ++L RFKSV KSWY L +D  F       +  +N + +K  + +    D S+       +D    V ++ L   +      I   S+ ++C
Subjt:  MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVC

Query:  VADVMNVSNVFLCNPATREFRKLPPS
         + +      ++CNP+TRE+RKLP S
Subjt:  VADVMNVSNVFLCNPATREFRKLPPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTCTATCTTGGCTTCCGCCCGAGACTCTGCTCCGTTTCAAGTCCGTTCACAAATCTTGGTATGCTCTAATCAACGATCCTAAATTCATATTAAAGCATTTTTT
GAATTCTCCTCAATACAATCACATATTTCTCAAGCGGATTGTGGAGATAGACTATGATAAAGATAAAAGTACGTTCTCCATTCTCAATTTTTCTCTTGATCCATACCTGT
TCGTTCTGGATATAGATTTATCAGACTATCAATATTCTCAATATTTTGAAATTCATGGCCATTCTCACTGTATGGTTTGCGTCGCCGATGTTATGAATGTTTCGAATGTT
TTCCTTTGTAACCCAGCAACTAGAGAGTTTCGTAAACTCCCACCGTCCATTTTTCCCGTTTATACCATCACTGATGCCTCTCCCCGTCCTATTTGTTACGAGTTGATAAT
GCAAGCGTCAGATTTGGGTACGATGCAAATTCCATACGATGTAAATTCCAGGGATTTTAAAGTGGTTAGAGTTGTGGATATTGTTGGACTCCGTCGTGGATATCCGGTTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTCTATCTTGGCTTCCGCCCGAGACTCTGCTCCGTTTCAAGTCCGTTCACAAATCTTGGTATGCTCTAATCAACGATCCTAAATTCATATTAAAGCATTTTTT
GAATTCTCCTCAATACAATCACATATTTCTCAAGCGGATTGTGGAGATAGACTATGATAAAGATAAAAGTACGTTCTCCATTCTCAATTTTTCTCTTGATCCATACCTGT
TCGTTCTGGATATAGATTTATCAGACTATCAATATTCTCAATATTTTGAAATTCATGGCCATTCTCACTGTATGGTTTGCGTCGCCGATGTTATGAATGTTTCGAATGTT
TTCCTTTGTAACCCAGCAACTAGAGAGTTTCGTAAACTCCCACCGTCCATTTTTCCCGTTTATACCATCACTGATGCCTCTCCCCGTCCTATTTGTTACGAGTTGATAAT
GCAAGCGTCAGATTTGGGTACGATGCAAATTCCATACGATGTAAATTCCAGGGATTTTAAAGTGGTTAGAGTTGTGGATATTGTTGGACTCCGTCGTGGATATCCGGTTT
GA
Protein sequenceShow/hide protein sequence
MEILSWLPPETLLRFKSVHKSWYALINDPKFILKHFLNSPQYNHIFLKRIVEIDYDKDKSTFSILNFSLDPYLFVLDIDLSDYQYSQYFEIHGHSHCMVCVADVMNVSNV
FLCNPATREFRKLPPSIFPVYTITDASPRPICYELIMQASDLGTMQIPYDVNSRDFKVVRVVDIVGLRRGYPV