; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G012590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G012590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCCHC-type domain-containing protein
Genome locationCmo_Chr05:9789523..9793091
RNA-Seq ExpressionCmoCh05G012590
SyntenyCmoCh05G012590
Gene Ontology termsGO:0000076 - DNA replication checkpoint (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0043111 - replication fork arrest (biological process)
GO:0048478 - replication fork protection (biological process)
GO:0031298 - replication fork protection complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR012923 - Chromosome segregation in meiosis protein 3
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040038 - TIPIN/Csm3/Swi3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599343.1 TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia]1.2e-14699.28Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSS PPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

XP_008456510.1 PREDICTED: TIMELESS-interacting protein [Cucumis melo]4.2e-12385.56Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        MDKDN A+AAPTGCYKCGKPGHWSRDCPSSAPNP    NSS PP SSAPAAPSK  EKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD
        SDLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD EG+FDN EEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD

Query:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQE---EPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT
        IEEDMLQEVYEKAT EEPL N QSDS T G TMEGV NQE   EP TSNS+ET  LTE+QR RMEANRLKALERAAAKARS  T
Subjt:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQE---EPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT

XP_022946681.1 TIMELESS-interacting protein [Cucurbita moschata]3.4e-149100Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

XP_022999094.1 TIMELESS-interacting protein [Cucurbita maxima]3.5e-14698.19Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPN S PPSSSAPAAP KVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEAS KNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGET+EGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

XP_023545691.1 TIMELESS-interacting protein [Cucurbita pepo subsp. pepo]8.7e-14597.84Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSS PPSSSAPAAP KVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVN-DADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEE
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVN D DDDINNENEAKDSEGLFDNQEEAS KNNGADDIEE
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVN-DADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEE

Query:  DMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        DMLQEVYEKATEEEPLMNLQSDSFTIGET+EGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  DMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

TrEMBL top hitse value%identityAlignment
A0A0A0LI96 CCHC-type domain-containing protein6.5e-12284.34Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        M+KDN AV APTGC+KCGKPGHWSRDCPSSAPNP    NSS+P  SS PAAPSK  EKPKKAPR RPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD
        +DLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD + +FDNQEEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD

Query:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT
        IEEDMLQEVYEKAT EEPL N QSDS TIG TMEGV NQ EP TSNS+ET  LTE+QR RMEANRLKALERAAAKARS PT
Subjt:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT

A0A1S3C4P4 TIMELESS-interacting protein2.0e-12385.56Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        MDKDN A+AAPTGCYKCGKPGHWSRDCPSSAPNP    NSS PP SSAPAAPSK  EKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD
        SDLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD EG+FDN EEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD

Query:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQE---EPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT
        IEEDMLQEVYEKAT EEPL N QSDS T G TMEGV NQE   EP TSNS+ET  LTE+QR RMEANRLKALERAAAKARS  T
Subjt:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQE---EPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT

A0A5D3BGW4 TIMELESS-interacting protein2.0e-12385.56Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        MDKDN A+AAPTGCYKCGKPGHWSRDCPSSAPNP    NSS PP SSAPAAPSK  EKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD
        SDLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD EG+FDN EEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD

Query:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQE---EPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT
        IEEDMLQEVYEKAT EEPL N QSDS T G TMEGV NQE   EP TSNS+ET  LTE+QR RMEANRLKALERAAAKARS  T
Subjt:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQE---EPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT

A0A6J1G4B9 TIMELESS-interacting protein1.6e-149100Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

A0A6J1KG39 TIMELESS-interacting protein1.7e-14698.19Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPN S PPSSSAPAAP KVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEAS KNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGET+EGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

SwissProt top hitse value%identityAlignment
Q3ZCC4 TIMELESS-interacting protein1.3e-0526.91Show/hide
Query:  SSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVK
        + P   S   AP  V  K +   R  PKL  E L+SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+
Subjt:  SSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVK

Query:  MCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEG-----------LFDNQEEASFKNNGADDIEEDMLQEV--YEKATEEEPLMNLQSDSF
         CL  +R             + PI++  +D ++N +E +++ G           L ++     F +  +  + E+  Q +   ++   E     L S+S 
Subjt:  MCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEG-----------LFDNQEEASFKNNGADDIEEDMLQEV--YEKATEEEPLMNLQSDSF

Query:  TIGETMEGVVNQEEPNTSNSNET
        ++G  +   VN     TS +  T
Subjt:  TIGETMEGVVNQEEPNTSNSNET

Q4QR88 TIMELESS-interacting protein1.4e-0726.58Show/hide
Query:  PGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPF
        PG   RD   + P+  S +P     P  P ++ +      R  PKL    L SE GL   LRH     K++G+GHE  DL+ LI     W   + P   F
Subjt:  PGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPF

Query:  EHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGL------FD-----NQEEASFKNNGADDIEEDMLQEVYEK
        E F+ +VE +   K V+ CL  +R             + PIV+  +D +NN +E +++  L      FD     + +   F +  + ++ E+  Q +  +
Subjt:  EHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGL------FD-----NQEEASFKNNGADDIEEDMLQEVYEK

Query:  ATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNE
          ++  L   Q+   +  +++E  V  EE +T  + E
Subjt:  ATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNE

Q5F416 TIMELESS-interacting protein2.8e-0528.45Show/hide
Query:  PNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAA
        P+ N  S    S+ AA        K   R  PKL    L+SE GL   LRH     K++G+GHE  DL+ L+     W   + P   F+ F+ +VE +  
Subjt:  PNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAA

Query:  TKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEG
         K V+ CL  +R             + PI++  +D   NE    +S GL                          + ATEE     + S S  +GE    
Subjt:  TKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEG

Query:  VVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAK
                  +   T LTE+Q+ R++ NR  ALER  AK
Subjt:  VVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAK

Q91WA1 TIMELESS-interacting protein2.3e-0730.92Show/hide
Query:  PNPNSSSPPSSSAPAAP-----SKVAEKPKK-APRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHK
        P P  +SP    A A P     S V   PK+   R  PKL    L SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE F+ +
Subjt:  PNPNSSSPPSSSAPAAP-----SKVAEKPKK-APRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHK

Query:  VEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTI
        VE +   K V+ CL  +R             + PIV+  +D +NN +E  ++              NG D             AT  +P +   SDS   
Subjt:  VEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTI

Query:  GETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSS
                   EP  S      LTE+Q+ R+E N+  ALER  AK  S+
Subjt:  GETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSS

Q9BVW5 TIMELESS-interacting protein2.5e-0629.29Show/hide
Query:  SSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVK
        + P   S   AP +V  K +   R  PKL  + L+SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE F+ +VE + + K V+
Subjt:  SSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVK

Query:  MCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSE---GLFDNQEEASFKNNGADDIEEDMLQEV--YEKATEEEPLMNLQSDSFTIGETM
         CL  +R       D     E  + N+ +   NNE++   +E    L +  E   F +  +  + E+  Q +   ++   E     L S+S T+G  M
Subjt:  MCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSE---GLFDNQEEASFKNNGADDIEEDMLQEV--YEKATEEEPLMNLQSDSFTIGETM

Arabidopsis top hitse value%identityAlignment
AT3G02820.1 zinc knuckle (CCHC-type) family protein2.0e-5950Show/hide
Query:  AAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPA---------APSKVAEKPKKAPRV------RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRG
        +APTGC+KCG+PGHWSRDCPSSAP   ++S  SSSAP+         + SK       AP+V      RPKLTPELLLSEDGLGYVLR+FP++FKYRGRG
Subjt:  AAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPA---------APSKVAEKPKKAPRV------RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRG

Query:  HEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDA-DDDINNENEAKDSEGLFDNQEEASFKNN
         E+SDL NLI LY EWH+H+LPYY F+HFVHKV+QVA+TKRVK C+ ELRE+VA G DP K  E    N    DD + +  + D E +     +A   + 
Subjt:  HEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDA-DDDINNENEAKDSEGLFDNQEEASFKNN

Query:  GADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETL-----LTEQQRARMEANRLKALERAAAKARSSP
         AD  E+ ML E+++ A++      L SD   + ++ E    Q     +N  + +     ++E+QR RMEANRLKALER  AKAR  P
Subjt:  GADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEEPNTSNSNETL-----LTEQQRARMEANRLKALERAAAKARSSP

AT3G42860.1 zinc knuckle (CCHC-type) family protein7.1e-0457.14Show/hide
Query:  AVAAPTGCYKCGKPGHWSRDCPSSAPNP
        + +A   C+KCGKPGHWSRDC + + NP
Subjt:  AVAAPTGCYKCGKPGHWSRDCPSSAPNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGGACAACGCCGCCGTCGCAGCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGATTGTCCTTCCTCTGCTCCAAATCCCAATTCTTC
GAGTCCTCCTTCCTCTTCTGCTCCTGCTGCCCCTTCAAAAGTTGCAGAGAAGCCCAAAAAGGCTCCCAGAGTCAGGCCCAAGCTCACACCCGAGCTACTCCTTTCCGAGG
ATGGTCTAGGTTATGTCCTTCGCCATTTTCCTCGCGCTTTCAAGTATCGCGGCCGTGGACACGAGATCAGTGATTTGGAAAACTTGATTGGCTTATACAGGGAATGGCAT
TCTCATATACTCCCTTATTACCCTTTCGAGCATTTTGTACATAAGGTTGAACAAGTAGCTGCTACGAAACGGGTTAAGATGTGTCTTGGAGAACTAAGAGAGAAAGTTGC
CAGGGGAGGAGATCCTACAAAGTGGCGCGAATCACCCATTGTAAATGATGCTGATGATGATATCAATAATGAAAACGAAGCCAAAGACTCGGAGGGCTTATTCGATAATC
AGGAAGAGGCTTCTTTCAAGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGAGGAGCCATTGATGAATTTGCAAAGT
GATTCCTTCACCATTGGGGAAACTATGGAAGGTGTTGTCAACCAAGAAGAACCAAACACTAGCAATTCAAATGAAACTCTGCTCACAGAGCAACAGAGAGCTCGAATGGA
AGCAAACAGGTTGAAGGCATTAGAACGAGCTGCAGCCAAGGCCCGCTCATCGCCAACTGCCTGA
mRNA sequenceShow/hide mRNA sequence
CAAAACATTCAATGAAGTTTGGCAAATGGGGTTTATGATGATTTGTTCATAATCACAGCTCAATTCAGATTGTTGAGAAAATTTTCCAAACAATCTTTCCCCGCCGAGTG
AAGTTTGCGAATAGCGAGAGGGATCGAACATGGATAAGGACAACGCCGCCGTCGCAGCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGATTGT
CCTTCCTCTGCTCCAAATCCCAATTCTTCGAGTCCTCCTTCCTCTTCTGCTCCTGCTGCCCCTTCAAAAGTTGCAGAGAAGCCCAAAAAGGCTCCCAGAGTCAGGCCCAA
GCTCACACCCGAGCTACTCCTTTCCGAGGATGGTCTAGGTTATGTCCTTCGCCATTTTCCTCGCGCTTTCAAGTATCGCGGCCGTGGACACGAGATCAGTGATTTGGAAA
ACTTGATTGGCTTATACAGGGAATGGCATTCTCATATACTCCCTTATTACCCTTTCGAGCATTTTGTACATAAGGTTGAACAAGTAGCTGCTACGAAACGGGTTAAGATG
TGTCTTGGAGAACTAAGAGAGAAAGTTGCCAGGGGAGGAGATCCTACAAAGTGGCGCGAATCACCCATTGTAAATGATGCTGATGATGATATCAATAATGAAAACGAAGC
CAAAGACTCGGAGGGCTTATTCGATAATCAGGAAGAGGCTTCTTTCAAGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGG
AAGAGGAGCCATTGATGAATTTGCAAAGTGATTCCTTCACCATTGGGGAAACTATGGAAGGTGTTGTCAACCAAGAAGAACCAAACACTAGCAATTCAAATGAAACTCTG
CTCACAGAGCAACAGAGAGCTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAACGAGCTGCAGCCAAGGCCCGCTCATCGCCAACTGCCTGATTCATGTGCTTGCTTTG
TGCAGATTAACTTTGATTGCAAAGCCAAATTACGATCAATGTGTTGTCTTAGGAACCCGAGTTCAAGAAGGTTCAGAAGTTTACTAAGTTTACACTTATCAAATCGGTTC
CTATTTCAATTCGTGTGCTTGAAAATTCGACTTTATCGCACTCAATAGCGGGAAACTCAAGAAAAATTATTAAACAACTGTTTTGAAGGTAGAAACCGTTAGACGAACAT
GACTCTCCACAATTGTATAATATTGTCCTCTTTAAGCATAAGCTTTCATGGCTGTGTGTTTGTTTATAAACCCATCATCAACACCTCCCCTTAATGGAGGCTAACTCTTT
TAAAGTCTTAGTCATTTTTTACTATTTTCAAGGAGG
Protein sequenceShow/hide protein sequence
MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSSPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWH
SHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQS
DSFTIGETMEGVVNQEEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA