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CmoCh05G012880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G012880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProstatic spermine-binding protein-like
Genome locationCmo_Chr05:9959353..9961514
RNA-Seq ExpressionCmoCh05G012880
SyntenyCmoCh05G012880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599369.1 hypothetical protein SDJN03_09147, partial [Cucurbita argyrosperma subsp. sororia]8.8e-7495.08Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEV--DDDDD
        MELEGVGYCVDDT+LWFRSVLEALAVET+LTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEV  DDDDD
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEV--DDDDD

Query:  DANGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARG
        DANGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE DDDDDEDEDDEDFSADEVDEVDQE+  +ARG
Subjt:  DANGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARG

KAG7030356.1 hypothetical protein SDJN02_08703 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-7997.33Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEV-DDDDDD
        MELEGVGYCVDDT+LWFRSVLEALAVET+LTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEV DDDDDD
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEV-DDDDDD

Query:  ANGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
        ANGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE DDDDDEDEDDEDFSADEVDEVDQEDG VARGNGRIE
Subjt:  ANGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE

XP_022946157.1 nucleolin-like [Cucurbita moschata]1.2e-83100Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA
        MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA

Query:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDEDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
        NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDEDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
Subjt:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDEDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE

XP_022999302.1 nucleolin-like [Cucurbita maxima]1.1e-7996.24Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA
        MELEGVGYCVDDT+LWFRSVLEAL VETVLTAANSL+WFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDD 
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA

Query:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
        NGPDGGEDVE+FSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE DDDDDEDEDDEDFSADEVDEVDQEDG VARGNGRIE
Subjt:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE

XP_023547167.1 nucleolin-like [Cucurbita pepo subsp. pepo]4.1e-7996.79Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEV-DDDDDD
        MELEGVGYCVDDT+LWFRSVLEAL VETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEV DDDDDD
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEV-DDDDDD

Query:  ANGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
        ANGPDGGEDVE+FSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE DDDDDEDEDDEDFSADEVDEVDQEDG VARGNGRIE
Subjt:  ANGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE

TrEMBL top hitse value%identityAlignment
A0A0A0LJ21 Uncharacterized protein2.7e-6079.14Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA
        MEL+ VGY +DDT+LWF SVLEAL VE +LTAANSL+WFL TAGALLNDVNAPPGF AIGK FPFEELHAKNNPD+ENVDGSE+EDDKDGDEV  DDDDA
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA

Query:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDND--EDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
        N  DGGEDVE+FSA EGDDGDLEDDP ASGNG+AGGDEEDDGE+DD+D  + D+DD+D+DDEDFSA+E DE DQED   A GNGRIE
Subjt:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDND--EDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE

A0A5A7V5K0 Prostatic spermine-binding protein-like6.0e-6078.61Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA
        MEL+ VGY +DD++LWF SVLEAL VET+LTAANSL+WFL TAGALLNDVNAPPGF AIGK FPF+ELHAKNNPD+ENVDGSE+EDDKDGDEV  DDDDA
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA

Query:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDND--EDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
        N  DGGEDVE+FSA EGDDGDLEDDP ASGNG+AGGDEEDDGE+DD+D  + D+DD+D+DDEDFSA+E DE DQED   A GNGRIE
Subjt:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDND--EDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE

A0A5D3BFL9 Prostatic spermine-binding protein-like2.0e-6079.14Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA
        MEL+ VGY +DD++LWF SVLEAL VET+LTAANSL+WFL TAGALLNDVNAPPGF AIGK FPFEELHAKNNPD+ENVDGSE+EDDKDGDEV  DDDDA
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA

Query:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDND--EDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
        N  DGGEDVE+FSA EGDDGDLEDDP ASGNG+AGGDEEDDGE+DD+D  + D+DD+D+DDEDFSA+E DE DQED   A GNGRIE
Subjt:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDND--EDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE

A0A6J1G2Z3 nucleolin-like5.9e-84100Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA
        MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA

Query:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDEDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
        NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDEDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
Subjt:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDEDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE

A0A6J1KAI6 nucleolin-like5.2e-8096.24Show/hide
Query:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA
        MELEGVGYCVDDT+LWFRSVLEAL VETVLTAANSL+WFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDD 
Subjt:  MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDA

Query:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE
        NGPDGGEDVE+FSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE DDDDDEDEDDEDFSADEVDEVDQEDG VARGNGRIE
Subjt:  NGPDGGEDVEEFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDE-DDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGGAAGGCGTGGGCTACTGCGTGGACGACACCGCTCTCTGGTTTCGCTCTGTTTTGGAAGCTCTGGCGGTGGAGACTGTTCTCACCGCTGCAAACTCTCTTTC
TTGGTTTCTGGCCACGGCAGGAGCACTGTTAAATGATGTCAATGCTCCACCAGGATTCGCTGCAATTGGGAAAAAGTTTCCTTTTGAAGAACTTCACGCAAAGAACAATC
CTGATAAGGAAAATGTAGATGGCAGTGAATCAGAGGATGATAAAGATGGAGATGAAGTTGATGATGATGATGATGATGCAAATGGCCCGGATGGTGGGGAAGATGTAGAA
GAATTCTCAGCCGGAGAAGGGGACGATGGTGATCTAGAGGATGACCCTGCAGCGAGTGGCAATGGAAAGGCAGGAGGTGATGAGGAAGATGATGGAGAAGAAGATGACAA
TGATGAAGACGACGACGATGATGAGGATGAGGACGATGAAGATTTCTCGGCTGACGAAGTGGATGAGGTTGATCAGGAAGATGGCTCTGTAGCACGTGGAAATGGAAGAA
TAGAAAGGAAGACGACGAGGATGATGACGATGACGAAGAAACACTCGAACCACCGGCCAAGAGAAGGAAGTGAGAATGGTGATTGGCTCTTTCTTTTTCCATTATCAGTT
GTGCCCTTCCCCATTGTATCTCAGGAGTTGGGAAGTTATTAG
mRNA sequenceShow/hide mRNA sequence
TAATCGGACCAAACCCTAGGGTTTACTCTAACCGGACCACTAAACCCATCTTTTTCTCTCAATTTCCAGAAAAAACCATTTGCTTTCTTCATCTTCTTCCAGGTCCCGCT
CTCGTTCTGCAACTACCCTCTTCATTTCTCTTCGTTTTCCCGTTCTTCTCTTCAATTTGAGCTTGTTTTTCTCTCGCGGTGATGGAGTTGGAAGGCGTGGGCTACTGCGT
GGACGACACCGCTCTCTGGTTTCGCTCTGTTTTGGAAGCTCTGGCGGTGGAGACTGTTCTCACCGCTGCAAACTCTCTTTCTTGGTTTCTGGCCACGGCAGGAGCACTGT
TAAATGATGTCAATGCTCCACCAGGATTCGCTGCAATTGGGAAAAAGTTTCCTTTTGAAGAACTTCACGCAAAGAACAATCCTGATAAGGAAAATGTAGATGGCAGTGAA
TCAGAGGATGATAAAGATGGAGATGAAGTTGATGATGATGATGATGATGCAAATGGCCCGGATGGTGGGGAAGATGTAGAAGAATTCTCAGCCGGAGAAGGGGACGATGG
TGATCTAGAGGATGACCCTGCAGCGAGTGGCAATGGAAAGGCAGGAGGTGATGAGGAAGATGATGGAGAAGAAGATGACAATGATGAAGACGACGACGATGATGAGGATG
AGGACGATGAAGATTTCTCGGCTGACGAAGTGGATGAGGTTGATCAGGAAGATGGCTCTGTAGCACGTGGAAATGGAAGAATAGAAAGGAAGACGACGAGGATGATGACG
ATGACGAAGAAACACTCGAACCACCGGCCAAGAGAAGGAAGTGAGAATGGTGATTGGCTCTTTCTTTTTCCATTATCAGTTGTGCCCTTCCCCATTGTATCTCAGGAGTT
GGGAAGTTATTAG
Protein sequenceShow/hide protein sequence
MELEGVGYCVDDTALWFRSVLEALAVETVLTAANSLSWFLATAGALLNDVNAPPGFAAIGKKFPFEELHAKNNPDKENVDGSESEDDKDGDEVDDDDDDANGPDGGEDVE
EFSAGEGDDGDLEDDPAASGNGKAGGDEEDDGEEDDNDEDDDDDEDEDDEDFSADEVDEVDQEDGSVARGNGRIERKTTRMMTMTKKHSNHRPREGSENGDWLFLFPLSV
VPFPIVSQELGSY