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CmoCh05G013030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G013030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr05:10120780..10121719
RNA-Seq ExpressionCmoCh05G013030
SyntenyCmoCh05G013030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599389.1 hypothetical protein SDJN03_09167, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6397.52Show/hide
Query:  MLLSMVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERAQGSDMTCAMKWSCLGLMGSPAYKDLSFRILKPSWPPTTWMVAAMAGTCQSDHAP
        MLL MVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAH QLLPERAQGSDMTCAM WSCLGLMGSPAYKDLSFRILKPSWPPTTWMVAAMAGTCQSDHAP
Subjt:  MLLSMVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERAQGSDMTCAMKWSCLGLMGSPAYKDLSFRILKPSWPPTTWMVAAMAGTCQSDHAP

Query:  NKLIVLAICSFVLCSQVMPLF
        NKLIVLAICSFVLCSQVMPLF
Subjt:  NKLIVLAICSFVLCSQVMPLF

XP_022999178.1 uncharacterized protein LOC111493639 [Cucurbita maxima]3.1e-3862.59Show/hide
Query:  MLLSMVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERAQGSDMTCAMKWSCL------------------GLMGSPAYKDLSFRILKPSWPP
        MLL MVNIAAYKAFARRGRSRAWCRCCW CQAIRPDA+AQLLPERA GSDM CAMKWSCL                  GL+GSPAYKD+SFRILKPSWPP
Subjt:  MLLSMVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERAQGSDMTCAMKWSCL------------------GLMGSPAYKDLSFRILKPSWPP

Query:  TTWMVAA-MAGTCQSDHAPNKL-------IVLAICSFVLCSQVMPLF
        TTWMVA  +A T    H  + L       +V A C + L   V  LF
Subjt:  TTWMVAA-MAGTCQSDHAPNKL-------IVLAICSFVLCSQVMPLF

XP_023545839.1 uncharacterized protein LOC111805154 [Cucurbita pepo subsp. pepo]2.7e-5884.17Show/hide
Query:  MLLSMVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERAQGSDMTCAMKWSCLG------------------LMGSPAYKDLSFRILKPSWPP
        MLL MVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERA GSDM CAMK SCLG                  LMGSPAYKDLSFRILKPSWPP
Subjt:  MLLSMVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERAQGSDMTCAMKWSCLG------------------LMGSPAYKDLSFRILKPSWPP

Query:  TTWMVAAMAGTCQSDHAPNKLIVLAICSFVLCSQVMPLF
        TTWMVAAMAGTCQSDHAPNKLIVLAICSFVLCSQVMPLF
Subjt:  TTWMVAAMAGTCQSDHAPNKLIVLAICSFVLCSQVMPLF

TrEMBL top hitse value%identityAlignment
A0A6J1KIV5 uncharacterized protein LOC1114936391.5e-3862.59Show/hide
Query:  MLLSMVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERAQGSDMTCAMKWSCL------------------GLMGSPAYKDLSFRILKPSWPP
        MLL MVNIAAYKAFARRGRSRAWCRCCW CQAIRPDA+AQLLPERA GSDM CAMKWSCL                  GL+GSPAYKD+SFRILKPSWPP
Subjt:  MLLSMVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERAQGSDMTCAMKWSCL------------------GLMGSPAYKDLSFRILKPSWPP

Query:  TTWMVAA-MAGTCQSDHAPNKL-------IVLAICSFVLCSQVMPLF
        TTWMVA  +A T    H  + L       +V A C + L   V  LF
Subjt:  TTWMVAA-MAGTCQSDHAPNKL-------IVLAICSFVLCSQVMPLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTATCTATGGTGAACATAGCTGCATACAAAGCTTTTGCCAGGAGAGGCAGGAGCAGAGCTTGGTGCCGGTGCTGCTGGCGTTGTCAAGCTATTAGACCCGACGC
TCACGCTCAACTTCTCCCTGAACGAGCACAGGGGAGTGACATGACTTGTGCCATGAAGTGGTCCTGCCTTGGTCTTATGGGCAGCCCGGCGTATAAGGACTTGTCCTTCA
GGATTCTCAAGCCTTCATGGCCTCCAACTACATGGATGGTTGCAGCCATGGCTGGCACATGCCAAAGCGATCACGCACCAAACAAACTCATTGTGCTGGCCATTTGCTCC
TTTGTGCTGTGTTCGCAGGTTATGCCTCTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGCTATCTATGGTGAACATAGCTGCATACAAAGCTTTTGCCAGGAGAGGCAGGAGCAGAGCTTGGTGCCGGTGCTGCTGGCGTTGTCAAGCTATTAGACCCGACGC
TCACGCTCAACTTCTCCCTGAACGAGCACAGGGGAGTGACATGACTTGTGCCATGAAGTGGTCCTGCCTTGGTCTTATGGGCAGCCCGGCGTATAAGGACTTGTCCTTCA
GGATTCTCAAGCCTTCATGGCCTCCAACTACATGGATGGTTGCAGCCATGGCTGGCACATGCCAAAGCGATCACGCACCAAACAAACTCATTGTGCTGGCCATTTGCTCC
TTTGTGCTGTGTTCGCAGGTTATGCCTCTTTTCTAG
Protein sequenceShow/hide protein sequence
MLLSMVNIAAYKAFARRGRSRAWCRCCWRCQAIRPDAHAQLLPERAQGSDMTCAMKWSCLGLMGSPAYKDLSFRILKPSWPPTTWMVAAMAGTCQSDHAPNKLIVLAICS
FVLCSQVMPLF