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CmoCh05G013120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G013120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr05:10180582..10181021
RNA-Seq ExpressionCmoCh05G013120
SyntenyCmoCh05G013120
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599399.1 hypothetical protein SDJN03_09177, partial [Cucurbita argyrosperma subsp. sororia]3.9e-4898.17Show/hide
Query:  MAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
        MAMA LSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRV FADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
Subjt:  MAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR

Query:  LVHRMAYSL
        LVHRMAYSL
Subjt:  LVHRMAYSL

KAG7030384.1 hypothetical protein SDJN02_08731, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-4798.17Show/hide
Query:  MAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
        MAMA LSGAVAVVLSFRHRKSAASVSSVV KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
Subjt:  MAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR

Query:  LVHRMAYSL
        LVHRMAYSL
Subjt:  LVHRMAYSL

XP_022946910.1 uncharacterized protein LOC111450851 isoform X1 [Cucurbita moschata]5.2e-4892.44Show/hide
Query:  MAMAMAALSGAVAVVLSFRHRKSAASVSS--------VVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRV
        MAMAMAALSGAVAVVLSFRHRKSAASVSS        +VKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRV
Subjt:  MAMAMAALSGAVAVVLSFRHRKSAASVSS--------VVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRV

Query:  ALYNGILRDRLVHRMAYSL
        ALYNGILRDRLVHRMAYSL
Subjt:  ALYNGILRDRLVHRMAYSL

XP_022946911.1 uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata]1.4e-50100Show/hide
Query:  MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILR
        MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILR
Subjt:  MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILR

Query:  DRLVHRMAYSL
        DRLVHRMAYSL
Subjt:  DRLVHRMAYSL

XP_038890799.1 uncharacterized protein LOC120080255 [Benincasa hispida]6.8e-3274.14Show/hide
Query:  MAMAMAALSGAVAVVLSFRHRKSAASVSSVVK-----KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALY
        MAMA AALSG V V+LSF   KS  S+SSVVK     KKKKGRKRVHFADD A+  TEELQ K GLILG SPP GR P   LTS GGGG GMPANRVALY
Subjt:  MAMAMAALSGAVAVVLSFRHRKSAASVSSVVK-----KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALY

Query:  NGILRDRLVHRMAYSL
        NGILRDRLVHR+AYSL
Subjt:  NGILRDRLVHRMAYSL

TrEMBL top hitse value%identityAlignment
A0A0A0LIY8 Uncharacterized protein6.6e-2562.93Show/hide
Query:  AMAMAALSGAVAVVLSFRHRKSAASVSSVVK-----KKKKGRKRVHFADDSAV-CSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALY
        +MAM A +G V VVLSF   KS  S+SSV+K     KKKKGRK+VHF+DD A+  ST++L+RK  ++LG SPP GRAP   LT+ GGGG G+PANR ALY
Subjt:  AMAMAALSGAVAVVLSFRHRKSAASVSSVVK-----KKKKGRKRVHFADDSAV-CSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALY

Query:  NGILRDRLVHRMAYSL
        NGILR+RLVHR+AYSL
Subjt:  NGILRDRLVHRMAYSL

A0A1S3C5Q6 uncharacterized protein LOC1034972024.6e-2667.8Show/hide
Query:  MAMAMAALS-GAVAVVLSFRHRKSAASVSSVV-----KKKKKGRKRVHFADDSAV-CSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVA
        MAMA AALS G V VVLS    KS  S+SSVV     +KKKKGRKRVHF+DD A+  STEEL+RK  +ILG SP  GRA    LT +GGGG GMPANR A
Subjt:  MAMAMAALS-GAVAVVLSFRHRKSAASVSSVV-----KKKKKGRKRVHFADDSAV-CSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVA

Query:  LYNGILRDRLVHRMAYSL
        LYNGILRDRLVHR+AYSL
Subjt:  LYNGILRDRLVHRMAYSL

A0A5A7V7G5 Uncharacterized protein5.1e-1757.14Show/hide
Query:  MAMAMAALS-GAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGIL
        MAMA AALS G V VVLS    KS  S+SS +                   STEEL+RK  +ILG SP  GRA    LT +GGGG GMPANR ALYNGIL
Subjt:  MAMAMAALS-GAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGIL

Query:  RDRLVHRMAYSL
        RDRLVHR+AYSL
Subjt:  RDRLVHRMAYSL

A0A6J1G4X1 uncharacterized protein LOC111450851 isoform X27.0e-51100Show/hide
Query:  MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILR
        MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILR
Subjt:  MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILR

Query:  DRLVHRMAYSL
        DRLVHRMAYSL
Subjt:  DRLVHRMAYSL

A0A6J1G5C3 uncharacterized protein LOC111450851 isoform X12.5e-4892.44Show/hide
Query:  MAMAMAALSGAVAVVLSFRHRKSAASVSS--------VVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRV
        MAMAMAALSGAVAVVLSFRHRKSAASVSS        +VKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRV
Subjt:  MAMAMAALSGAVAVVLSFRHRKSAASVSS--------VVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRV

Query:  ALYNGILRDRLVHRMAYSL
        ALYNGILRDRLVHRMAYSL
Subjt:  ALYNGILRDRLVHRMAYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15760.1 unknown protein3.7e-0442.35Show/hide
Query:  SSVVKKKKKGRKRVHFADD--SAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYS
        S   KK+ K  K+V FAD+      + EE +R+         PV +   P  T      S MPANR+ALYNGILRDR  HR+ YS
Subjt:  SSVVKKKKKGRKRVHFADD--SAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGCTATGGCAGCTCTGTCAGGGGCTGTCGCCGTCGTGCTTTCCTTCCGCCACCGTAAATCCGCCGCCTCAGTTTCTTCCGTGGTGAAGAAGAAGAAGAAGGG
AAGAAAAAGAGTTCACTTTGCTGATGATTCAGCCGTTTGCAGTACTGAAGAGTTGCAGAGAAAAAACGGCTTAATTTTGGGGCCTTCGCCGCCGGTGGGTAGAGCTCCGC
CGCCGTCTTTGACGAGCCACGGTGGAGGAGGCAGCGGAATGCCGGCGAATAGGGTGGCGCTGTACAATGGAATCTTAAGGGATCGTTTGGTTCACAGGATGGCATATTCT
CTTTAA
mRNA sequenceShow/hide mRNA sequence
TGCCTTCTTCAATTTTGAGCTCCCAAGCCATGGCTATGGCTATGGCAGCTCTGTCAGGGGCTGTCGCCGTCGTGCTTTCCTTCCGCCACCGTAAATCCGCCGCCTCAGTT
TCTTCCGTGGTGAAGAAGAAGAAGAAGGGAAGAAAAAGAGTTCACTTTGCTGATGATTCAGCCGTTTGCAGTACTGAAGAGTTGCAGAGAAAAAACGGCTTAATTTTGGG
GCCTTCGCCGCCGGTGGGTAGAGCTCCGCCGCCGTCTTTGACGAGCCACGGTGGAGGAGGCAGCGGAATGCCGGCGAATAGGGTGGCGCTGTACAATGGAATCTTAAGGG
ATCGTTTGGTTCACAGGATGGCATATTCTCTTTAA
Protein sequenceShow/hide protein sequence
MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYS
L