; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G013140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G013140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChaperone protein DnaJ-like
Genome locationCmo_Chr05:10194826..10200240
RNA-Seq ExpressionCmoCh05G013140
SyntenyCmoCh05G013140
Gene Ontology termsGO:0061077 - chaperone-mediated protein folding (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0101031 - chaperone complex (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599402.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.7e-7099.24Show/hide
Query:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
        MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
Subjt:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST

Query:  CWLCSGKKDILCGGCNGAGFMGGFMSTADKLL
        CWLCSGKKDILCGGCNGAGFMGGFMSTADK L
Subjt:  CWLCSGKKDILCGGCNGAGFMGGFMSTADKLL

XP_022946217.1 uncharacterized protein LOC111450369 [Cucurbita moschata]6.3e-69100Show/hide
Query:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
        MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
Subjt:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST

Query:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD
        CWLCSGKKDILCGGCNGAGFMGGFMSTAD
Subjt:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD

XP_022999180.1 uncharacterized protein LOC111493642 [Cucurbita maxima]9.4e-6596.12Show/hide
Query:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
        MAYSVGSSTPI SFNPSSKP  VP+KAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGS 
Subjt:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST

Query:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD
        CWLCSGKKDILCGGCNGAGFMGGFMSTAD
Subjt:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD

XP_023522471.1 uncharacterized protein LOC111786453 [Cucurbita pepo subsp. pepo]7.7e-6797.67Show/hide
Query:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
        MAY+VGSSTPICSFNPSSKPTSVPHKAFRI EAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGS 
Subjt:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST

Query:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD
        CWLCSGKKDILCGGCNGAGFMGGFMSTAD
Subjt:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD

XP_038889638.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]4.9e-5379.41Show/hide
Query:  MAYSVGSSTPICSFNPSSKP-------TSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNG
        MA+S  SSTPICSFN SSKP        SVP KAFRIN+AFQ TNPIRLL    KASDGADSNQT K KSI+C+DC+GNGAVLCSQCKGTGVNSVDHFNG
Subjt:  MAYSVGSSTPICSFNPSSKP-------TSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTAD
        QFKAGS CWLC GK+DILCGGCNGAGF+GGFMSTAD
Subjt:  QFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTAD

TrEMBL top hitse value%identityAlignment
A0A0A0LFZ2 Uncharacterized protein6.4e-5176.47Show/hide
Query:  MAYSVGSSTPICSFNPSSKP-------TSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNG
        MA+S+ SSTPICSFN SS P        SVP KAFRINEAFQ TN IRLL    KASDGADS QT K KSI+C+DC+GNGAV CSQCKGTGVNSVDHFNG
Subjt:  MAYSVGSSTPICSFNPSSKP-------TSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTAD
        QFKAG  CWLC GK+DILCGGCNGAGF+GGFMSTAD
Subjt:  QFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTAD

A0A1S3C5F0 uncharacterized protein LOC1034972448.4e-5175.74Show/hide
Query:  MAYSVGSSTPICSFNPSSKP-------TSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNG
        MA+S+ SSTPICSFN SS P        SVP KAFR+NEA Q TNPIR L   AKASDGADS QT K KSI+C+DC+GNGAVLCSQCKGTGVNSVDHFNG
Subjt:  MAYSVGSSTPICSFNPSSKP-------TSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTAD
        QFKAG  CWLC GK+D+LCGGCNGAGF+GGFMSTAD
Subjt:  QFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTAD

A0A5A7V544 Chaperone protein DnaJ-like8.4e-5175.74Show/hide
Query:  MAYSVGSSTPICSFNPSSKP-------TSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNG
        MA+S+ SSTPICSFN SS P        SVP KAFR+NEA Q TNPIR L   AKASDGADS QT K KSI+C+DC+GNGAVLCSQCKGTGVNSVDHFNG
Subjt:  MAYSVGSSTPICSFNPSSKP-------TSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTAD
        QFKAG  CWLC GK+D+LCGGCNGAGF+GGFMSTAD
Subjt:  QFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTAD

A0A6J1G351 uncharacterized protein LOC1114503693.1e-69100Show/hide
Query:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
        MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
Subjt:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST

Query:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD
        CWLCSGKKDILCGGCNGAGFMGGFMSTAD
Subjt:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD

A0A6J1KEM1 uncharacterized protein LOC1114936424.6e-6596.12Show/hide
Query:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
        MAYSVGSSTPI SFNPSSKP  VP+KAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGS 
Subjt:  MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST

Query:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD
        CWLCSGKKDILCGGCNGAGFMGGFMSTAD
Subjt:  CWLCSGKKDILCGGCNGAGFMGGFMSTAD

SwissProt top hitse value%identityAlignment
Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic6.9e-2649.23Show/hide
Query:  SSTP-ICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASD----GADSN-QTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
        SS P  C  +PS  P   P   F  N+   S    R L   +++       A++N Q  K  S++C++C G G V CSQCKG GVN +DHFNGQFKAG+ 
Subjt:  SSTP-ICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASD----GADSN-QTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST

Query:  CWLCSGKKDILCGGCNGAGFMGGFMSTADK
        CWLC GKK++LCG CNGAGF+GGF+ST D+
Subjt:  CWLCSGKKDILCGGCNGAGFMGGFMSTADK

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic1.4e-2663.1Show/hide
Query:  KASDGADS-NQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTADK
        KA++   S  + +K KSILC DC GNGA++C++C+G GVNSVD+F G+FKAGS CWLC GK++ILCG CNGAGF+GGF+ST D+
Subjt:  KASDGADS-NQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGSTCWLCSGKKDILCGGCNGAGFMGGFMSTADK

Arabidopsis top hitse value%identityAlignment
AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein9.9e-0434.38Show/hide
Query:  NQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGSTCWLCSGKKDILCGGCNGAG
        N  ++  +  C  CNG GA  C  C G+G  +V+   G+ K  S C  C G   + C  C G+G
Subjt:  NQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGSTCWLCSGKKDILCGGCNGAG

AT2G24860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein9.9e-0440.35Show/hide
Query:  CSDCNGNGAVLCSQCKGTGVNSV-DHFNGQFKAGST-CWLCSGKKDILCGGCNGAGF
        CS CN  G V C  C GTG   + D+   Q  + +T C +CSG+    C  C G GF
Subjt:  CSDCNGNGAVLCSQCKGTGVNSV-DHFNGQFKAGST-CWLCSGKKDILCGGCNGAGF

AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein4.9e-2749.23Show/hide
Query:  SSTP-ICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASD----GADSN-QTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST
        SS P  C  +PS  P   P   F  N+   S    R L   +++       A++N Q  K  S++C++C G G V CSQCKG GVN +DHFNGQFKAG+ 
Subjt:  SSTP-ICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASD----GADSN-QTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGST

Query:  CWLCSGKKDILCGGCNGAGFMGGFMSTADK
        CWLC GKK++LCG CNGAGF+GGF+ST D+
Subjt:  CWLCSGKKDILCGGCNGAGFMGGFMSTADK

AT5G55125.1 Ribosomal protein L312.7e-2575.68Show/hide
Query:  MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRARRQLAESIGQIAKFKRRYEKDIVENDESVEKAEK
        MKKGLHPQMQWISYVTQSGRLMHVMMT+IHHVGKVYHF A+RQ+A+SIGQIAKFKRR+      N++  E AE+
Subjt:  MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRARRQLAESIGQIAKFKRRYEKDIVENDESVEKAEK

AT5G55125.2 Ribosomal protein L312.7e-2575.68Show/hide
Query:  MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRARRQLAESIGQIAKFKRRYEKDIVENDESVEKAEK
        MKKGLHPQMQWISYVTQSGRLMHVMMT+IHHVGKVYHF A+RQ+A+SIGQIAKFKRR+      N++  E AE+
Subjt:  MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRARRQLAESIGQIAKFKRRYEKDIVENDESVEKAEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATATTCCGTGGGTTCTTCCACACCCATTTGCTCCTTCAATCCCTCGAGCAAGCCCACGTCTGTGCCTCATAAGGCTTTTCGGATAAATGAGGCGTTCCAAAGCAC
AAACCCCATTAGGCTTTTGCCTTGTGCTGCCAAGGCTTCAGATGGTGCAGATAGTAACCAAACCAGAAAAAACAAAAGCATACTTTGTTCTGACTGCAATGGAAATGGTG
CTGTTCTATGTTCTCAGTGTAAAGGAACAGGAGTTAATTCAGTGGATCATTTCAATGGACAGTTCAAAGCTGGTAGCACATGCTGGCTCTGCAGTGGCAAAAAGGACATC
CTGTGTGGGGGCTGTAATGGAGCTGGTTTTATGGGTGGGTTTATGAGTACAGCTGACAAGCTTCTTCTTACAATCTCCGGTATCTGCTTCCGCTTCCGCTTCATTCAGCG
ACTCAAGATCTATACAATGAAGAAAGGCTTGCACCCTCAAATGCAGTGGATATCATATGTCACACAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACCATG
TTGGTAAAGTCTACCACTTCAGAGCAAGGCGTCAATTAGCTGAAAGTATTGGGCAGATTGCCAAGTTCAAACGTCGTTACGAGAAAGATATTGTCGAAAATGATGAAAGT
GTTGAAAAGGCTGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
AAGACCATCACACACACAGCAGAAGCAGATGAGTAGCTCATCAGAAAGCTTCTGAATTTCAGTCCTCAAGAACAAATTCGAATCCAAAACCCCATTTAAATGGCATATTC
CGTGGGTTCTTCCACACCCATTTGCTCCTTCAATCCCTCGAGCAAGCCCACGTCTGTGCCTCATAAGGCTTTTCGGATAAATGAGGCGTTCCAAAGCACAAACCCCATTA
GGCTTTTGCCTTGTGCTGCCAAGGCTTCAGATGGTGCAGATAGTAACCAAACCAGAAAAAACAAAAGCATACTTTGTTCTGACTGCAATGGAAATGGTGCTGTTCTATGT
TCTCAGTGTAAAGGAACAGGAGTTAATTCAGTGGATCATTTCAATGGACAGTTCAAAGCTGGTAGCACATGCTGGCTCTGCAGTGGCAAAAAGGACATCCTGTGTGGGGG
CTGTAATGGAGCTGGTTTTATGGGTGGGTTTATGAGTACAGCTGACAAGCTTCTTCTTACAATCTCCGGTATCTGCTTCCGCTTCCGCTTCATTCAGCGACTCAAGATCT
ATACAATGAAGAAAGGCTTGCACCCTCAAATGCAGTGGATATCATATGTCACACAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACCATGTTGGTAAAGTC
TACCACTTCAGAGCAAGGCGTCAATTAGCTGAAAGTATTGGGCAGATTGCCAAGTTCAAACGTCGTTACGAGAAAGATATTGTCGAAAATGATGAAAGTGTTGAAAAGGC
TGAAAAGTGAGGTTCAATGCAAAGCACAAGGATCTGCTGTTCACTTGGATCATTATGGATTCGTTTTGTGAGTTCTAGGAATTTAAAGTTCCCTTCTATTTAATGGAGTC
GATCCCTTTTCATAGTCTAGTATCTTACAGAACACCGAGTTAATTTTATAATGGTTTTCGTATGCTCTTACCATTAGATATATTGAATCTGCATTCCTATCTTCAGTTCA
ATAAATGTGATCATTTTCCAC
Protein sequenceShow/hide protein sequence
MAYSVGSSTPICSFNPSSKPTSVPHKAFRINEAFQSTNPIRLLPCAAKASDGADSNQTRKNKSILCSDCNGNGAVLCSQCKGTGVNSVDHFNGQFKAGSTCWLCSGKKDI
LCGGCNGAGFMGGFMSTADKLLLTISGICFRFRFIQRLKIYTMKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRARRQLAESIGQIAKFKRRYEKDIVENDES
VEKAEK