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CmoCh05G013280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G013280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr05:10290805..10294621
RNA-Seq ExpressionCmoCh05G013280
SyntenyCmoCh05G013280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599415.1 hypothetical protein SDJN03_09193, partial [Cucurbita argyrosperma subsp. sororia]6.0e-3298.67Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MAAPFDSNSREAVPK+RSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
XP_022946445.1 uncharacterized protein LOC111450499 [Cucurbita moschata]2.7e-32100Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
XP_022999556.1 uncharacterized protein LOC111493883 [Cucurbita maxima]6.6e-3194.67Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MAAPFDSNSRE VPK+RSAPIKFLVPL+YAPVLPLIRIALRKNPV+RDRLFTAVLAGAFAHGFYLVSDIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
XP_023546130.1 uncharacterized protein LOC111805333 [Cucurbita pepo subsp. pepo]7.8e-3297.33Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MAAPFDSNSREAVPK+RSAPIKFLVPL+YAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
XP_038891091.1 uncharacterized protein LOC120080491 isoform X2 [Benincasa hispida]1.4e-2888Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MAAPFD +SREAVP+++SAP KFLVPL+YAPVLPLIRIALRKNPV+RDRLFTAVLAGAFAHGFYLV+DIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
TrEMBL top hitse value%identityAlignment
A0A6J1CPL9 uncharacterized protein LOC1110131383.7e-2785.33Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MAAP+D  +REAV K++ APIKFLVPL+YAPVLPLIRIALRKNPV+RDRLFTAVLAGAFAHGFYLV+DIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
A0A6J1FDN8 uncharacterized protein LOC1114444364.3e-2886.67Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MA+P+D  SREA PK++SAP KFLVPLIYAPVLPLIRIALRKNPV+RDRLFTAVLAGAFAHGFYLV+DIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
A0A6J1G3Q4 uncharacterized protein LOC1114504991.3e-32100Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
A0A6J1HSI9 uncharacterized protein LOC1114657384.3e-2886.67Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MA+P+D  SREA PK++SAP KFLVPLIYAPVLPLIRIALRKNPV+RDRLFTAVLAGAFAHGFYLV+DIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
A0A6J1KDE7 uncharacterized protein LOC1114938833.2e-3194.67Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MAAPFDSNSRE VPK+RSAPIKFLVPL+YAPVLPLIRIALRKNPV+RDRLFTAVLAGAFAHGFYLVSDIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68680.1 unknown protein2.0e-2268Show/hide
Query:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK
        MA+  D +      K++ APIKFLVPLIYAP LPLIR++LR  PV+RDRLF  VL GAFAHGFYLV+DIYDAESK
Subjt:  MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCGCCCTTCGATTCCAATTCTCGGGAGGCTGTTCCGAAGAGGCGATCAGCTCCAATCAAGTTCTTGGTTCCTCTGATTTATGCCCCTGTTCTTCCTCTCATCAG
AATTGCGCTGCGGAAGAACCCTGTTATGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGGTGCTTTTGCCCATGGCTTTTACTTGGTAAGTGATATCTATGATGCTGAGA
GCAAGTGA
mRNA sequenceShow/hide mRNA sequence
AGTTTCTGTTCCATTGTGCTGAGGGTGAAGCTAATTTTCTAATAGCCGCCGCCCGCCCGCCATCAAATCGACAGCCGCCGGTTCCGCCTCCGCCATGGCCGCGCCCTTCG
ATTCCAATTCTCGGGAGGCTGTTCCGAAGAGGCGATCAGCTCCAATCAAGTTCTTGGTTCCTCTGATTTATGCCCCTGTTCTTCCTCTCATCAGAATTGCGCTGCGGAAG
AACCCTGTTATGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGGTGCTTTTGCCCATGGCTTTTACTTGGTAAGTGATATCTATGATGCTGAGAGCAAGTGAACTCAATT
TCCCACCTCCACATGATCATGATGATCTTGATGCTTGTTCGAGAAATCGGAAGCCAGCCGAGATGCGACGCCCGAATGGTACATTCCGTCCTGAAAACAATCGGTTTTCG
ACGTCATAATTCGGAGTTGCCTCGCTTTCTCTGCCGTTAAGCCACCGGGAGAGAATCGGCTCCCCGCTGCCTTCTCTGCCGAATTCGAATTCGAATCCGAATTAGGATTT
GGCTGCGCACCCTCGGTGATTTTGTTCGGCGGGCAAGGTTTCCACCAGGGCCTGTAATGGCGCTGGGGATCTGATTTCCGGTGACCGGTGCCGGCGCTGGCAGAGGGTCG
GATTCCGATGGGGCGGAAGACGAGTAGATTGGTGGTCATTTTTTTGGGGAGCGGAAGGAAGGTGAAAATGAAGGGATTAATTGGTTGGCTTTTTAACCTTGTAATTATAC
CCAAATAAAGATATCATAATAATAGTTAATTTCTATTCCAC
Protein sequenceShow/hide protein sequence
MAAPFDSNSREAVPKRRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAGAFAHGFYLVSDIYDAESK