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CmoCh05G013430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G013430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPeroxiredoxins prx-1 prx-2 prx-3
Genome locationCmo_Chr05:10451643..10453687
RNA-Seq ExpressionCmoCh05G013430
SyntenyCmoCh05G013430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586427.1 hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sororia]4.6e-3289.41Show/hide
Query:  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
        SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA+ PVASLS KE+LGSS
Subjt:  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS

KAG6599447.1 hypothetical protein SDJN03_09225, partial [Cucurbita argyrosperma subsp. sororia]2.6e-43100Show/hide
Query:  FVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
        FVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
Subjt:  FVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS

KAG7021282.1 hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-3289.41Show/hide
Query:  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
        SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA+ PVASLS KE+LGSS
Subjt:  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS

KAG7030425.1 hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-5586.76Show/hide
Query:  MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRCSFVQ--------SICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFR
        MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCR  F          S+   +SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFR
Subjt:  MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRCSFVQ--------SICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFR

Query:  CRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
        CRLHRS SSAWMKRSKSMPADHPVASLSSKESLGSS
Subjt:  CRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS

XP_022946647.1 uncharacterized protein LOC111450652 [Cucurbita moschata]1.7e-58100Show/hide
Query:  LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKS
        LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKS
Subjt:  LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKS

Query:  MPADHPVASLSSKESLGSS
        MPADHPVASLSSKESLGSS
Subjt:  MPADHPVASLSSKESLGSS

TrEMBL top hitse value%identityAlignment
A0A0A0LKU3 Uncharacterized protein1.2e-3089.02Show/hide
Query:  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
        MASDGSLSV VSTSPKH NRDAETVRS+SPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMP ++PVASLS KESL SS
Subjt:  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS

A0A5A7V1X5 Uncharacterized protein9.3e-3189.02Show/hide
Query:  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
        MASDGSL V VSTSPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA++PVASLS K SLGSS
Subjt:  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS

A0A5D3CHP3 Uncharacterized protein2.7e-3087.8Show/hide
Query:  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
        MASDGSL V VS+SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA++PVASLS K SLGSS
Subjt:  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS

A0A6A1UK22 Uncharacterized protein1.7e-1671.05Show/hide
Query:  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSK
        MAS GS  + VST+PK G  +A T  S SPKGQCLCSPT H+GSFRCRLHRS SSAWMKRSKSMPA   VA+LS K
Subjt:  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSK

A0A6J1G498 uncharacterized protein LOC1114506528.1e-59100Show/hide
Query:  LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKS
        LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKS
Subjt:  LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKS

Query:  MPADHPVASLSSKESLGSS
        MPADHPVASLSSKESLGSS
Subjt:  MPADHPVASLSSKESLGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein7.8e-0656.1Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPA
        ++S  K  CLCSPT H GSFRCR+HRS+S   ++R+KS+ A
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPA

AT1G67910.2 unknown protein7.8e-0656.1Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPA
        ++S  K  CLCSPT H GSFRCR+HRS+S   ++R+KS+ A
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPA

AT3G13227.1 serine-rich protein-related1.3e-0550Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPAD
        +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P++
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPAD

AT3G56500.1 serine-rich protein-related7.3e-0442.86Show/hide
Query:  KGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVAS
        K  C+C+PT H+GSFRCRLHRS +++    +  +    P+ S
Subjt:  KGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVAS

AT5G55980.1 serine-rich protein-related7.3e-0444.59Show/hide
Query:  SVVVSTSPKHGNRDAETVRSSSPKG---QCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKES
        S V S S  + +   +  RSSS K     CLCSPT H GSFRCR HR  S   + R+ S+ ++  V  LSSK S
Subjt:  SVVVSTSPKHGNRDAETVRSSSPKG---QCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTGCAGTTTTGTTCA
ATCGATTTGCTGCAGATTGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGA
GTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGATGTCATCGGCATGGATGAAACGATCGAAATCAATG
CCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTGCAGTTTTGTTCA
ATCGATTTGCTGCAGATTGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGA
GTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGATGTCATCGGCATGGATGAAACGATCGAAATCAATG
CCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAA
Protein sequenceShow/hide protein sequence
MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSM
PADHPVASLSSKESLGSS