; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G014160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G014160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMediator of RNA polymerase II transcription subunit 20
Genome locationCmo_Chr05:10880460..10882936
RNA-Seq ExpressionCmoCh05G014160
SyntenyCmoCh05G014160
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR013921 - Mediator complex, subunit Med20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030510.1 Mediator of RNA polymerase II transcription subunit 20a, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-119100Show/hide
Query:  VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYK
        VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYK
Subjt:  VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYK

Query:  LRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQYA
        LRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQYA
Subjt:  LRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQYA

Query:  NVMAQLIATVQAVQSARN
        NVMAQLIATVQAVQSARN
Subjt:  NVMAQLIATVQAVQSARN

XP_004141069.1 mediator of RNA polymerase II transcription subunit 20a [Cucumis sativus]1.6e-11795.96Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N  A EFPRDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKS+QVMEEFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQSARN
        AVQY NVMAQLIATVQAVQSARN
Subjt:  AVQYANVMAQLIATVQAVQSARN

XP_008459711.1 PREDICTED: mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo]5.2e-11694.17Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N  A EFPRDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKS+Q+M+EFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSD+YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQSARN
        AVQY NVMAQLIATVQAVQSARN
Subjt:  AVQYANVMAQLIATVQAVQSARN

XP_022946745.1 mediator of RNA polymerase II transcription subunit 20a-like [Cucurbita moschata]1.3e-122100Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQSARN
        AVQYANVMAQLIATVQAVQSARN
Subjt:  AVQYANVMAQLIATVQAVQSARN

XP_038889134.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Benincasa hispida]2.9e-11996.86Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A EFPRDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKS++VMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQSARN
        AVQYANVMAQLIATVQAVQSARN
Subjt:  AVQYANVMAQLIATVQAVQSARN

TrEMBL top hitse value%identityAlignment
A0A0A0LHQ1 Mediator of RNA polymerase II transcription subunit 207.8e-11895.96Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N  A EFPRDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKS+QVMEEFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQSARN
        AVQY NVMAQLIATVQAVQSARN
Subjt:  AVQYANVMAQLIATVQAVQSARN

A0A1S3CAW6 Mediator of RNA polymerase II transcription subunit 202.5e-11694.17Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N  A EFPRDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKS+Q+M+EFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSD+YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQSARN
        AVQY NVMAQLIATVQAVQSARN
Subjt:  AVQYANVMAQLIATVQAVQSARN

A0A5D3CH02 Mediator of RNA polymerase II transcription subunit 202.5e-11694.17Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N  A EFPRDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKS+Q+M+EFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSD+YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQSARN
        AVQY NVMAQLIATVQAVQSARN
Subjt:  AVQYANVMAQLIATVQAVQSARN

A0A6J1G4U3 Mediator of RNA polymerase II transcription subunit 206.2e-123100Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQSARN
        AVQYANVMAQLIATVQAVQSARN
Subjt:  AVQYANVMAQLIATVQAVQSARN

A0A6J1KEU1 Mediator of RNA polymerase II transcription subunit 206.2e-123100Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQSARN
        AVQYANVMAQLIATVQAVQSARN
Subjt:  AVQYANVMAQLIATVQAVQSARN

SwissProt top hitse value%identityAlignment
Q54FL3 Putative mediator of RNA polymerase II transcription subunit 202.6e-0927.55Show/hide
Query:  LNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGD
        L E+++ +E + G+K        + Y   + D    +   PR+F  +   E+P K + + R    ++E D  + +I+EK  SYK R        +Y+LGD
Subjt:  LNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGD

Query:  FQLRVGKVVPNNSENLRGIVMEIEY----LPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDY------YTSQHTAVQYANV
        F +RVG +V      +RGI++E+EY     P++S     +++ EF          +   G F   EP    +  S Y      Y+  HT+ QY N+
Subjt:  FQLRVGKVVPNNSENLRGIVMEIEY----LPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDY------YTSQHTAVQYANV

Q6NPF4 Mediator of RNA polymerase II transcription subunit 20a2.5e-8973.06Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MP+KWVLHWQPN GSTV+SQILNE +QCVESI+GVK G+WKATL +YKP+L+D      EFPRDFLGIS+ +QPNKYY IIR QRIVLEAD +IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +VAL F+GFQYQLGDF+LRVGKVVP +SEN+RGIVME+EYLPISSMEK+++VMEEF E+W EA++K SLPG+F++I+ NF E+GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQ
        AV+YA VMA +IATVQAV+
Subjt:  AVQYANVMAQLIATVQAVQ

Q9M0S0 Mediator of RNA polymerase II transcription subunit 20b6.2e-8064.98Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MP+KW+LHWQPN GST +SQILNEV+Q +ES++GVK G WKATL +YKP+L+D    A EFPR+F+GIS+PE+P+KYY +IR QRIV+EAD +IQ IME 
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +++  FEG +YQLGDF+LRVGKVVP ++E +RG+VME+EYLPISSM  +K++MEEF E+WQEAMSK SLPG+F++ E NF ++GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQA
        AV YA  MA L+A +QA
Subjt:  AVQYANVMAQLIATVQA

Arabidopsis top hitse value%identityAlignment
AT2G28020.1 BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT2G28230.1)6.5e-1661.76Show/hide
Query:  MEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQ-YANVMAQLIATVQAV
        ME +++VMEEF E+W EA++K SLPG+F++ + NF E+GL D YT QHTAV+ YA VMA +IATVQAV
Subjt:  MEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQ-YANVMAQLIATVQAV

AT2G28230.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex1.8e-9073.06Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MP+KWVLHWQPN GSTV+SQILNE +QCVESI+GVK G+WKATL +YKP+L+D      EFPRDFLGIS+ +QPNKYY IIR QRIVLEAD +IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +VAL F+GFQYQLGDF+LRVGKVVP +SEN+RGIVME+EYLPISSMEK+++VMEEF E+W EA++K SLPG+F++I+ NF E+GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQ
        AV+YA VMA +IATVQAV+
Subjt:  AVQYANVMAQLIATVQAVQ

AT4G09070.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex4.4e-8164.98Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MP+KW+LHWQPN GST +SQILNEV+Q +ES++GVK G WKATL +YKP+L+D    A EFPR+F+GIS+PE+P+KYY +IR QRIV+EAD +IQ IME 
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +++  FEG +YQLGDF+LRVGKVVP ++E +RG+VME+EYLPISSM  +K++MEEF E+WQEAMSK SLPG+F++ E NF ++GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQA
        AV YA  MA L+A +QA
Subjt:  AVQYANVMAQLIATVQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCTAAAATGGGTTTTGCATTGGCAACCGAATGCCGGCAGCACTGTTAACAGTCAGATACTCAACGAGGTTTCGCAGTGTGTTGAGAGTATCCATGGCGTTAAAGG
GGGCAAGTGGAAAGCTACTCTTACATTCTACAAACCCATCTTAAGAGATACGAACATAGCAGCGGGCGAGTTCCCGCGCGACTTTCTTGGAATTTCTGTGCCGGAGCAAC
CAAACAAGTACTATCTCATAATTCGTGGCCAACGGATCGTGTTAGAAGCTGATTTTACGATTCAGGCTATAATGGAGAAGCTGCAGTCTTACAAATTGCGCGTTGCTCTC
AATTTCGAGGGGTTCCAGTACCAATTAGGGGATTTCCAACTAAGAGTTGGAAAAGTTGTTCCCAACAATTCCGAGAATTTGAGAGGAATTGTCATGGAGATTGAGTATCT
GCCAATTTCTTCAATGGAGAAATCAAAACAGGTGATGGAGGAGTTTTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGCTCCCTACCTGGTCGTTTCATGCACATAGAAC
CCAACTTTGCAGAATATGGACTGTCGGATTACTATACTTCTCAACACACAGCGGTTCAGTATGCCAATGTGATGGCCCAGCTAATCGCTACTGTGCAAGCAGTTCAATCA
GCCAGAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATTCTTTCAATTGGGCTTTCCGTGAAAGTTGCAAATTGTGCCTAATCTGCTCCGAACCGCCTCATCTCCGTTGTTTTGCTGCGGCTTTGTACGACTGGAAGTATGCCGCT
AAAATGGGTTTTGCATTGGCAACCGAATGCCGGCAGCACTGTTAACAGTCAGATACTCAACGAGGTTTCGCAGTGTGTTGAGAGTATCCATGGCGTTAAAGGGGGCAAGT
GGAAAGCTACTCTTACATTCTACAAACCCATCTTAAGAGATACGAACATAGCAGCGGGCGAGTTCCCGCGCGACTTTCTTGGAATTTCTGTGCCGGAGCAACCAAACAAG
TACTATCTCATAATTCGTGGCCAACGGATCGTGTTAGAAGCTGATTTTACGATTCAGGCTATAATGGAGAAGCTGCAGTCTTACAAATTGCGCGTTGCTCTCAATTTCGA
GGGGTTCCAGTACCAATTAGGGGATTTCCAACTAAGAGTTGGAAAAGTTGTTCCCAACAATTCCGAGAATTTGAGAGGAATTGTCATGGAGATTGAGTATCTGCCAATTT
CTTCAATGGAGAAATCAAAACAGGTGATGGAGGAGTTTTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGCTCCCTACCTGGTCGTTTCATGCACATAGAACCCAACTTT
GCAGAATATGGACTGTCGGATTACTATACTTCTCAACACACAGCGGTTCAGTATGCCAATGTGATGGCCCAGCTAATCGCTACTGTGCAAGCAGTTCAATCAGCCAGAAA
CTAG
Protein sequenceShow/hide protein sequence
MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVAL
NFEGFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQS
ARN