| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022950954.1 DNA-directed RNA polymerase V subunit 5A isoform X1 [Cucurbita moschata] | 1.9e-117 | 99.1 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
GLEKGQIVKVTYDGDMTRSH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
|
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| XP_022950955.1 DNA-directed RNA polymerase V subunit 5A isoform X2 [Cucurbita moschata] | 1.9e-117 | 99.1 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
GLEKGQIVKVTYDGDMTRSH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
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| XP_022971517.1 DNA-directed RNA polymerase V subunit 5A isoform X1 [Cucurbita maxima] | 1.0e-115 | 98.2 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQF DVDRLKLSAAHRADPSKRILVIFCGTGAV
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
LEKGQIVKVTYDGDMTRSH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
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| XP_022971518.1 DNA-directed RNA polymerase V subunit 5A isoform X2 [Cucurbita maxima] | 1.0e-115 | 98.2 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQF DVDRLKLSAAHRADPSKRILVIFCGTGAV
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
LEKGQIVKVTYDGDMTRSH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
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| XP_023539155.1 DNA-directed RNA polymerase V subunit 5A [Cucurbita pepo subsp. pepo] | 7.8e-116 | 98.2 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQF DVDRLKLSAAH ADPSKRILVIFCGTGAV
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
GLEKGQIVKVTYDGDMTRSH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1E191 DNA-directed RNA polymerase V subunit 5A | 2.7e-106 | 89.64 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGF GEPNRVELGTCLSSYID+G+TESHRY+L RRTVLEMLRDRGYT SD DLTLQQFREIYGQ DVDRLKLSA HR+DPSKRILVIFCGTG+V
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAV++FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
GLEKGQ+VKVTYDGDMT SH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
|
|
| A0A6J1GH86 DNA-directed RNA polymerase V subunit 5A isoform X2 | 9.0e-118 | 99.1 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
GLEKGQIVKVTYDGDMTRSH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
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| A0A6J1GHB9 DNA-directed RNA polymerase V subunit 5A isoform X1 | 9.0e-118 | 99.1 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
GLEKGQIVKVTYDGDMTRSH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
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| A0A6J1I260 DNA-directed RNA polymerase V subunit 5A isoform X1 | 4.9e-116 | 98.2 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQF DVDRLKLSAAHRADPSKRILVIFCGTGAV
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
LEKGQIVKVTYDGDMTRSH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
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| A0A6J1I733 DNA-directed RNA polymerase V subunit 5A isoform X2 | 4.9e-116 | 98.2 | Show/hide |
Query: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQF DVDRLKLSAAHRADPSKRILVIFCGTGAV
Subjt: MEEDGFLGEPNRVELGTCLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAV
Query: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Subjt: KVSAIRNIAGQIVNKETLHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQIVKVTYDGDMTRSHTS
LEKGQIVKVTYDGDMTRSH +
Subjt: GLEKGQIVKVTYDGDMTRSHTS
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|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.3e-25 | 33.68 | Show/hide |
Query: DGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDR-----LKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLH
D E++R + R+TVL+M+ DRGY + ++D L+ F+E +G + L + AH DP+ ++ V F + + I+ I Q + ++ +
Subjt: DGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDR-----LKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLH
Query: GLILIVQNQITNQAMKAVEVFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKV
I++VQ +T A +++ + + +E F +L+VNIT+H L P H V+T EEK +LL +Y +++ QLPR+ + D +ARY+GL +GQ+VK+
Subjt: GLILIVQNQITNQAMKAVEVFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKV
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| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 7.5e-29 | 40.22 | Show/hide |
Query: ESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLHGLILIVQNQ
E R Y ++T+++MLRDRGY I S++ +T QQF +G + + L A R D S ++ + F V V ++ + + E + IL+VQ
Subjt: ESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLHGLILIVQNQ
Query: ITNQAMKAVEVFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKV
+T A + S F +E+FQ ++LVNI +H L P HQVLT EEK+ LLE+Y+++E QLPR+ TD IARY+GL++GQ+VK+
Subjt: ITNQAMKAVEVFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKV
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| Q9M1H8 DNA-directed RNA polymerase V subunit 5C | 1.0e-46 | 46.15 | Show/hide |
Query: CLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKET
C+S D G ES R+YL+R T EMLRDRGY +N +++ LTL +FR ++G+ +++RL++ R+DP K+ILV+F GT + V ++R + QI N
Subjt: CLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKET
Query: LHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTY
LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL ++++E+KQLP + D+ RYYGL+K Q+VK+TY
Subjt: LHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTY
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| Q9M1J2 DNA-directed RNA polymerase V subunit 5A | 2.7e-71 | 61.95 | Show/hide |
Query: CLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKET
CLS Y+D + ESHRYYL+RR L+MLRDRGY ++ DI+L+L FR +YG+ DVDRL++SA HR+D +K++ ++F GT VKV+AIR++ I+++ET
Subjt: CLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKET
Query: LHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTYDGDMT
+ GLIL++QN +TNQA+KA+E+FSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LL+++SIEEKQLPR+ + DAI RYYGLEKGQ+VKV Y G++T
Subjt: LHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTYDGDMT
Query: RSHTS
SH +
Subjt: RSHTS
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| Q9ZVB9 DNA-directed RNA polymerases IV and V subunit 5B | 7.7e-66 | 59 | Show/hide |
Query: IDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLHGLI
I + E H+YYL+RRT +EMLRDRGY ++ DI+L+LQQFR +YG+ DVD L++SA HR D SK+I V+FCGTG VKV+A+R IA ++++E + GLI
Subjt: IDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLHGLI
Query: LIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTYDGDMTRSHTS
L++Q+ ITNQA+KAVE+FSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LL+++SIEEKQLPR+ D I RYYGLE GQ++KVTY +++ SH +
Subjt: LIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTYDGDMTRSHTS
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|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 5.4e-67 | 59 | Show/hide |
Query: IDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLHGLI
I + E H+YYL+RRT +EMLRDRGY ++ DI+L+LQQFR +YG+ DVD L++SA HR D SK+I V+FCGTG VKV+A+R IA ++++E + GLI
Subjt: IDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLHGLI
Query: LIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTYDGDMTRSHTS
L++Q+ ITNQA+KAVE+FSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LL+++SIEEKQLPR+ D I RYYGLE GQ++KVTY +++ SH +
Subjt: LIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTYDGDMTRSHTS
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| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 5.3e-30 | 40.22 | Show/hide |
Query: ESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLHGLILIVQNQ
E R Y ++T+++MLRDRGY I S++ +T QQF +G + + L A R D S ++ + F V V ++ + + E + IL+VQ
Subjt: ESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLHGLILIVQNQ
Query: ITNQAMKAVEVFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKV
+T A + S F +E+FQ ++LVNI +H L P HQVLT EEK+ LLE+Y+++E QLPR+ TD IARY+GL++GQ+VK+
Subjt: ITNQAMKAVEVFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKV
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| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 7.4e-48 | 46.15 | Show/hide |
Query: CLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKET
C+S D G ES R+YL+R T EMLRDRGY +N +++ LTL +FR ++G+ +++RL++ R+DP K+ILV+F GT + V ++R + QI N
Subjt: CLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKET
Query: LHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTY
LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL ++++E+KQLP + D+ RYYGL+K Q+VK+TY
Subjt: LHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTY
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| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.9e-72 | 61.95 | Show/hide |
Query: CLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKET
CLS Y+D + ESHRYYL+RR L+MLRDRGY ++ DI+L+L FR +YG+ DVDRL++SA HR+D +K++ ++F GT VKV+AIR++ I+++ET
Subjt: CLSSYIDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFLDVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKET
Query: LHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTYDGDMT
+ GLIL++QN +TNQA+KA+E+FSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LL+++SIEEKQLPR+ + DAI RYYGLEKGQ+VKV Y G++T
Subjt: LHGLILIVQNQITNQAMKAVEVFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKVTYDGDMT
Query: RSHTS
SH +
Subjt: RSHTS
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 6.1e-26 | 36.27 | Show/hide |
Query: IDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFL---DVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLH
+ D E R + RRTVL+MLRDRGYTI SD++L ++F + + + + + + L +SA +P+ +I V + V V I+ + + +H
Subjt: IDDGTTESHRYYLSRRTVLEMLRDRGYTINPSDIDLTLQQFREIYGQFL---DVDRLKLSAAHRADPSKRILVIFCGTGAVKVSAIRNIAGQIVNKETLH
Query: GLILIVQNQITNQAMKAVEVFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKV
I++V IT A AV + +E+F+ +L+ NIT+H L + VL ++ K+KLL Y++++ QLPR+L TD +ARYYGL++GQ+VK+
Subjt: GLILIVQNQITNQAMKAVEVFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLEQYSIEEKQLPRMLRTDAIARYYGLEKGQIVKV
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