; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G000230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G000230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane amino acid transporter family protein
Genome locationCmo_Chr06:147063..149497
RNA-Seq ExpressionCmoCh06G000230
SyntenyCmoCh06G000230
Gene Ontology termsGO:0006865 - amino acid transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015293 - symporter activity (molecular function)
InterPro domainsIPR013057 - Amino acid transporter, transmembrane domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596171.1 Amino acid transporter AVT1A, partial [Cucurbita argyrosperma subsp. sororia]4.9e-55100Show/hide
Query:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
        MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
Subjt:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS

Query:  FIIGLGVLSAIFGTYSSVSQIAESY
        FIIGLGVLSAIFGTYSSVSQIAESY
Subjt:  FIIGLGVLSAIFGTYSSVSQIAESY

XP_022941249.1 amino acid transporter AVT1A-like isoform X1 [Cucurbita moschata]1.2e-50100Show/hide
Query:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
        KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
Subjt:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA

Query:  IFGTYSSVSQIAESY
        IFGTYSSVSQIAESY
Subjt:  IFGTYSSVSQIAESY

XP_022941270.1 amino acid transporter AVT1A-like isoform X3 [Cucurbita moschata]4.9e-55100Show/hide
Query:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
        MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
Subjt:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS

Query:  FIIGLGVLSAIFGTYSSVSQIAESY
        FIIGLGVLSAIFGTYSSVSQIAESY
Subjt:  FIIGLGVLSAIFGTYSSVSQIAESY

XP_022971194.1 amino acid transporter AVT1A-like isoform X3 [Cucurbita maxima]1.1e-5499.2Show/hide
Query:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
        MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
Subjt:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS

Query:  FIIGLGVLSAIFGTYSSVSQIAESY
        FIIGLGVLSAIFGTYSSVSQIA+SY
Subjt:  FIIGLGVLSAIFGTYSSVSQIAESY

XP_023539402.1 amino acid transporter AVT1A-like isoform X3 [Cucurbita pepo subsp. pepo]4.9e-55100Show/hide
Query:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
        MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
Subjt:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS

Query:  FIIGLGVLSAIFGTYSSVSQIAESY
        FIIGLGVLSAIFGTYSSVSQIAESY
Subjt:  FIIGLGVLSAIFGTYSSVSQIAESY

TrEMBL top hitse value%identityAlignment
A0A6J1FMR2 amino acid transporter AVT1A-like isoform X16.0e-51100Show/hide
Query:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
        KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
Subjt:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA

Query:  IFGTYSSVSQIAESY
        IFGTYSSVSQIAESY
Subjt:  IFGTYSSVSQIAESY

A0A6J1FMS3 amino acid transporter AVT1A-like isoform X26.0e-51100Show/hide
Query:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
        KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
Subjt:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA

Query:  IFGTYSSVSQIAESY
        IFGTYSSVSQIAESY
Subjt:  IFGTYSSVSQIAESY

A0A6J1FT41 amino acid transporter AVT1A-like isoform X32.4e-55100Show/hide
Query:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
        MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
Subjt:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS

Query:  FIIGLGVLSAIFGTYSSVSQIAESY
        FIIGLGVLSAIFGTYSSVSQIAESY
Subjt:  FIIGLGVLSAIFGTYSSVSQIAESY

A0A6J1I648 amino acid transporter AVT1A-like isoform X21.3e-5099.13Show/hide
Query:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
        KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
Subjt:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA

Query:  IFGTYSSVSQIAESY
        IFGTYSSVSQIA+SY
Subjt:  IFGTYSSVSQIAESY

A0A6J1I7V6 amino acid transporter AVT1A-like isoform X35.3e-5599.2Show/hide
Query:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
        MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS
Subjt:  MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSS

Query:  FIIGLGVLSAIFGTYSSVSQIAESY
        FIIGLGVLSAIFGTYSSVSQIA+SY
Subjt:  FIIGLGVLSAIFGTYSSVSQIAESY

SwissProt top hitse value%identityAlignment
F4IUW3 Amino acid transporter AVT1C2.2e-1846.9Show/hide
Query:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
        KYAL ++P+A S+EEL+P R   S W  I +RT LV S++ V   +PFFGLVM+LIGSLL++L+ +I+P  CFL I+  + +  QM     II +G +S+
Subjt:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA

Query:  IFGTYSSVSQIAE
        + G+YS++S+I E
Subjt:  IFGTYSSVSQIAE

F4JE35 Amino acid transporter AVT1B1.6e-1641.59Show/hide
Query:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
        KYAL ++P+A S+EEL+P     S +  I +R+AL +S++ V   +PFFGLVM+LIGS L++L+ +I+P  CFL I+  + +  Q+T    I+ +G + +
Subjt:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA

Query:  IFGTYSSVSQIAE
        + GTYS++++I E
Subjt:  IFGTYSSVSQIAE

O80668 Amino acid transporter AVT1A1.4e-3669.57Show/hide
Query:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
        KYALLMNPLARSIEELLP R+S + WCF+LLRTALV SSVC AFL+PFFGL+MALIGSLLSIL+A+I+PA+CF+KIMG +A++ QM  SS I+ +GV+S 
Subjt:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA

Query:  IFGTYSSVSQIAESY
          GTYSSV++I  +Y
Subjt:  IFGTYSSVSQIAESY

Q8GYS4 Amino acid transporter AVT1D3.6e-1645.61Show/hide
Query:  LLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVL
        + KYAL + P+  S+EEL+P     S    IL RT LV S++ VA  +PFF +V ALIGS L++L+A+I P +C+L I+ G+ S  Q+    FII  GV+
Subjt:  LLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVL

Query:  SAIFGTYSSVSQIA
        S   GTYS++S++A
Subjt:  SAIFGTYSSVSQIA

Q8LPF4 Amino acid transporter AVT1E1.8e-1239.13Show/hide
Query:  LLKYALLMNPLARSIEELLP--RRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLG
        + KYAL + P+  S+EEL+P   R   S    +L RT LV+S++ VA  +PFF  V ALIGS +++L+A+I P +C++ IM G  +  Q+     I+ +G
Subjt:  LLKYALLMNPLARSIEELLP--RRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLG

Query:  VLSAIFGTYSSVSQI
        ++S   GTYS+++++
Subjt:  VLSAIFGTYSSVSQI

Arabidopsis top hitse value%identityAlignment
AT2G39130.1 Transmembrane amino acid transporter family protein1.6e-1946.9Show/hide
Query:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
        KYAL ++P+A S+EEL+P R   S W  I +RT LV S++ V   +PFFGLVM+LIGSLL++L+ +I+P  CFL I+  + +  QM     II +G +S+
Subjt:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA

Query:  IFGTYSSVSQIAE
        + G+YS++S+I E
Subjt:  IFGTYSSVSQIAE

AT2G41190.1 Transmembrane amino acid transporter family protein9.9e-3869.57Show/hide
Query:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
        KYALLMNPLARSIEELLP R+S + WCF+LLRTALV SSVC AFL+PFFGL+MALIGSLLSIL+A+I+PA+CF+KIMG +A++ QM  SS I+ +GV+S 
Subjt:  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA

Query:  IFGTYSSVSQIAESY
          GTYSSV++I  +Y
Subjt:  IFGTYSSVSQIAESY

AT3G09330.1 Transmembrane amino acid transporter family protein3.8e-1339.47Show/hide
Query:  LLKYALLMNPLARSIEEL-LPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGV
        + KYAL + P+   +EEL LP     S+   I ++T LV+S++ VA   PFF ++ AL+GS L++L+  I P +C+L I+ G  SK Q+    FII  G+
Subjt:  LLKYALLMNPLARSIEEL-LPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGV

Query:  LSAIFGTYSSVSQI
        +S   GTYS++ ++
Subjt:  LSAIFGTYSSVSQI

AT5G02170.1 Transmembrane amino acid transporter family protein1.3e-1339.13Show/hide
Query:  LLKYALLMNPLARSIEELLP--RRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLG
        + KYAL + P+  S+EEL+P   R   S    +L RT LV+S++ VA  +PFF  V ALIGS +++L+A+I P +C++ IM G  +  Q+     I+ +G
Subjt:  LLKYALLMNPLARSIEELLP--RRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLG

Query:  VLSAIFGTYSSVSQI
        ++S   GTYS+++++
Subjt:  VLSAIFGTYSSVSQI

AT5G02180.1 Transmembrane amino acid transporter family protein2.5e-1745.61Show/hide
Query:  LLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVL
        + KYAL + P+  S+EEL+P     S    IL RT LV S++ VA  +PFF +V ALIGS L++L+A+I P +C+L I+ G+ S  Q+    FII  GV+
Subjt:  LLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVL

Query:  SAIFGTYSSVSQIA
        S   GTYS++S++A
Subjt:  SAIFGTYSSVSQIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAAATTGCTTCCTTGACACTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTACCACGTAGAATTTCAAATAGCTTCTGGTG
TTTCATTCTTCTAAGAACAGCACTTGTTGTTTCTTCTGTTTGCGTGGCCTTCCTTCTGCCCTTTTTTGGTCTCGTGATGGCTTTGATTGGCTCCCTTCTCAGCATACTTT
TGGCGGTAATAGTGCCAGCCGTATGTTTTTTGAAAATCATGGGAGGCGAAGCTTCAAAGATGCAGATGACTTGGAGCAGCTTTATCATTGGACTCGGTGTCCTTAGTGCA
ATCTTTGGAACATACTCTTCTGTGTCACAGATTGCAGAGAGTTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAAATTGCTTCCTTGACACTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTACCACGTAGAATTTCAAATAGCTTCTGGTG
TTTCATTCTTCTAAGAACAGCACTTGTTGTTTCTTCTGTTTGCGTGGCCTTCCTTCTGCCCTTTTTTGGTCTCGTGATGGCTTTGATTGGCTCCCTTCTCAGCATACTTT
TGGCGGTAATAGTGCCAGCCGTATGTTTTTTGAAAATCATGGGAGGCGAAGCTTCAAAGATGCAGATGACTTGGAGCAGCTTTATCATTGGACTCGGTGTCCTTAGTGCA
ATCTTTGGAACATACTCTTCTGTGTCACAGATTGCAGAGAGTTACTGAAACATATATGGTCAGAATAAATTTTCTGTAGGCTTCGTGTCTTGTAGCTGTCGATAGCTTCA
GGTCATACATTATGCAAGCAGTTGACTTCTAAATAATTGCATATCCATTATTGCTTAATTGTTGTGTTGCCTCTCTTTATTGGGTGAAGATGTTGATTTCATGTTTGCTT
ATGCTGCTTAGATTAGCTATTTCTTTTGTGGTTTCGTCTTCACAAACATTCCATTTGGTCTGCGC
Protein sequenceShow/hide protein sequence
MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSA
IFGTYSSVSQIAESY