; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G000330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G000330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Genome locationCmo_Chr06:227958..229208
RNA-Seq ExpressionCmoCh06G000330
SyntenyCmoCh06G000330
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR021099 - Plant organelle RNA recognition domain
IPR045040 - PORR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027720.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-23799.28Show/hide
Query:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
        MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLR IFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
Subjt:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD

Query:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
        FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
Subjt:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV

Query:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
        ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPY KPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
Subjt:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE

Query:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL
        KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAY KGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL
Subjt:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL

Query:  SKSEGSWVLPILQGFD
        SKSEGSWVLPILQGFD
Subjt:  SKSEGSWVLPILQGFD

XP_022937832.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata]5.3e-239100Show/hide
Query:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
        MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
Subjt:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD

Query:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
        FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
Subjt:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV

Query:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
        ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
Subjt:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE

Query:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL
        KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL
Subjt:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL

Query:  SKSEGSWVLPILQGFD
        SKSEGSWVLPILQGFD
Subjt:  SKSEGSWVLPILQGFD

XP_022937849.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucurbita moschata]1.5e-230100Show/hide
Query:  SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHP
        SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHP
Subjt:  SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHP

Query:  LRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDKHENVAVAEVE
        LRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDKHENVAVAEVE
Subjt:  LRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDKHENVAVAEVE

Query:  QWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF
        QWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF
Subjt:  QWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF

Query:  AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGF
        AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGF
Subjt:  AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGF

Query:  D
        D
Subjt:  D

XP_022971448.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita maxima]1.4e-23498.32Show/hide
Query:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
        MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
Subjt:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD

Query:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
        FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
Subjt:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV

Query:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
        ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVE
Subjt:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE

Query:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL
        KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEH+SAADNGD L
Subjt:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL

Query:  SKSEGSWVLPILQGFD
        SKSEGSWVLPILQGFD
Subjt:  SKSEGSWVLPILQGFD

XP_023539959.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo]1.0e-23498.32Show/hide
Query:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
        MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRL+DRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
Subjt:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD

Query:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
        FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESIL KYSDDFRLVDLEIV
Subjt:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV

Query:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
        ELV KHENV+VAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVE
Subjt:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE

Query:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL
        KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKG LVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEH+SAADNGDWL
Subjt:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL

Query:  SKSEGSWVLPILQGFD
        SKSEGSWVLPILQGFD
Subjt:  SKSEGSWVLPILQGFD

TrEMBL top hitse value%identityAlignment
A0A0A0LFE1 PORR domain-containing protein1.8e-20886.96Show/hide
Query:  LFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFV
        LFES   LS   FSR+ FGPFNHFCQ+RW KP V AQTRLEDRTRDLKLDKLATQ++K R+I KL ELM +RKRGPFVSLQIMSRWRN VG+RIGIG+F+
Subjt:  LFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFV

Query:  HKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVEL
        HKYPH+FD+FPHP+RRNLCCRITGKM ALMKQEENVIND EIETVQRLKKLLMMSVNGTLH+HALRLIS+ELGLPDGFRESIL KYSDDFRLVDLEIVEL
Subjt:  HKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVEL

Query:  VDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKL
        V+KH+N A+AEVE+WREREFREKWLSEFDVK+AFPINFPTGF I+GGFREKLRNWQRLPY +PYEKRQGFG RS GG+ R EKRAVAVLHELLSLTVEKL
Subjt:  VDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKL

Query:  VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSK
        VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKG TQIVFLREAYAKGCLVEPNPIYIVRRKMQDL+LLGRRHTKQLESSMEIKE+ +A +NGDWLSK
Subjt:  VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSK

Query:  SEGSWVLPILQGFD
        SEGSWVLPILQGFD
Subjt:  SEGSWVLPILQGFD

A0A1S3B7J9 protein ROOT PRIMORDIUM DEFECTIVE 11.1e-20887.41Show/hide
Query:  FESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVH
        FES F LS   FSR+ FGPFNHFCQ+RW KP V+AQTRLE RTRDLKLDKLATQ++K R+I KL ELM +RKRGPFVSLQIMSRWRN VG+RIGIG+F+H
Subjt:  FESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVH

Query:  KYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELV
        KYPHVFDVFPHP+RRNLCCRITGKM ALMKQEENVIND EIETVQRLKKLLMMSVNGTLH+HALRLIS+ELGLPDGFRESIL KYSDDFRLVDLEIVELV
Subjt:  KYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELV

Query:  DKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLV
        +KHE+ AVAEVE+WREREFREKWLSEFDVK+AFPINFPTGF I+GGFREKLRNWQRLPY +PYEKRQ FG RS GG+ R EKRAVAVLHELLSLTVEKLV
Subjt:  DKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLV

Query:  DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKS
        DV+RLVHFRRDFAIEVNIRELLLKHPG+FYISTKG TQIVFLREAYAKGCLVEPNPIYIVRRKMQDL+LLGRRHTKQLESSMEIKE+ +AADNGDWLSKS
Subjt:  DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKS

Query:  EGSWVLPILQGFD
        EGSWVLPILQGFD
Subjt:  EGSWVLPILQGFD

A0A6J1FCB5 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X12.6e-239100Show/hide
Query:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
        MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
Subjt:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD

Query:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
        FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
Subjt:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV

Query:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
        ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
Subjt:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE

Query:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL
        KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL
Subjt:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL

Query:  SKSEGSWVLPILQGFD
        SKSEGSWVLPILQGFD
Subjt:  SKSEGSWVLPILQGFD

A0A6J1FCD7 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X27.5e-231100Show/hide
Query:  SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHP
        SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHP
Subjt:  SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHP

Query:  LRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDKHENVAVAEVE
        LRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDKHENVAVAEVE
Subjt:  LRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDKHENVAVAEVE

Query:  QWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF
        QWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF
Subjt:  QWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF

Query:  AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGF
        AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGF
Subjt:  AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGF

Query:  D
        D
Subjt:  D

A0A6J1I6W3 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X16.6e-23598.32Show/hide
Query:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
        MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD
Subjt:  MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGD

Query:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
        FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV
Subjt:  FVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIV

Query:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
        ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVE
Subjt:  ELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE

Query:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL
        KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEH+SAADNGD L
Subjt:  KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWL

Query:  SKSEGSWVLPILQGFD
        SKSEGSWVLPILQGFD
Subjt:  SKSEGSWVLPILQGFD

SwissProt top hitse value%identityAlignment
A0MFS5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic7.4e-3428.35Show/hide
Query:  ESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRL--------EDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL--
        +S   +ST   +R +F         ++G  + + +TR+          R ++L  D +  + +KL+++  +R++++ +     +SL+ + ++R  +GL  
Subjt:  ESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRL--------EDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL--

Query:  RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRL
        R      + KYP VF++       +L  ++T +   L   E  + N+ E   V +L+KL+MMS++  + +  +  +  +LGLP  FR++I  +Y   FR+
Subjt:  RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRL

Query:  VDL---EIVELVDKHENVAVAEVE----QWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRA
        V       +EL      +AV+  E      R RE  E+ L          +  P G  +      K+  ++ + Y  PY  +    +RS  G   +EK A
Subjt:  VDL---EIVELVDKHENVAVAEVE----QWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRA

Query:  VAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR
          V+HELLSLT EK   V+ L HFR +F     +R +L++HP +FY+S KG    VFLREAY    L++ +P+ +V+ KM+ L+ + R
Subjt:  VAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR

B6TTV8 Protein WHAT'S THIS FACTOR 1, chloroplastic3.8e-3831.44Show/hide
Query:  KPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL--RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAA
        +PA         R ++   D +  + +KL+++ KLR +++  +    +SL+ + R+R  +GL  +  +   + ++P VFDV    +  +L  R+T     
Subjt:  KPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL--RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAA

Query:  LMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE---IVELVDKHENVAVAEVEQWREREFREKWL
        L   E  + N+SE   V +L+KLLMMS    + I  +  +  +LGLP  FR+++ ++Y   FR+V ++    +EL      +AV+  E   E E R +  
Subjt:  LMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE---IVELVDKHENVAVAEVEQWREREFREKWL

Query:  SEFDVKFAFPINF-----PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIR
         E ++    P+ F     P G K+  G   ++  ++ +PY  PY       +RS  G   +EK A  V+HE+LSLTVEK   V+ L HFR +F    ++R
Subjt:  SEFDVKFAFPINF-----PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIR

Query:  ELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR
         ++++HP +FY+S KG+   VFLREAY    LVE N + +++ KM+ L+ + R
Subjt:  ELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR

Q65XL5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic1.7e-3831.94Show/hide
Query:  AVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL--RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALM
        AV AQ  ++ R +++  D +  + +KL+++ KLR +++       +SL+ + R+R  +GL  +  +   + ++P VF+V    +  +L  R+T     L 
Subjt:  AVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL--RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALM

Query:  KQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEI---VELV--DKHENVAVAEV--EQWREREFREK
          E ++ N+SE   V +L+KLLMMS +  + I  +  +  +LGLP  FR++I ++Y   FR+V ++    +EL   D    V+ AEV  E+ R RE +E+
Subjt:  KQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEI---VELV--DKHENVAVAEV--EQWREREFREK

Query:  -WLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIREL
          + +  +KF   +  P G K+  G   ++  ++ +PY  PY       +RS  G   +EK A  V+HE+LSLT+EK   V+ L HFR +F    ++R +
Subjt:  -WLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIREL

Query:  LLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGS
        L++HP +FY+S KG+   VFLREAY    LVE + + +++ KM+ L+ + R   + + ++ E  +      NG     SEGS
Subjt:  LLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGS

Q689D6 Protein ROOT PRIMORDIUM DEFECTIVE 15.1e-6739.27Show/hide
Query:  TAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL---RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMK
        T   + +DR RD   D      +K+R + K   L++ +     +++ ++      +GL   +   G F+ K+PHVF+++ HP++R L CR+T K    ++
Subjt:  TAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL---RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMK

Query:  QEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHENVAVAEVEQWREREFREKWLS
         E   + D   + V RL+KL+MMS  G + +  +R+   E GLP+ F  S+++K+   FRL+D E      +E+V+K  N+++  +E+ RE E+R K + 
Subjt:  QEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHENVAVAEVEQWREREFREKWLS

Query:  EFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH
          DV+F+F +NFP GFKI   FR  +  WQRLPY  PYE   G+ +RS    +R EKR+VA +HELLSLTVEK + +ER+ HFR    +   ++E LL+H
Subjt:  EFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH

Query:  PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK
         GIFYIST+GN      VFLRE Y +G LVEPN +Y+ RR++ +L+L+  R  K
Subjt:  PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK

Q9ZUZ6 Protein WHAT'S THIS FACTOR 9, mitochondrial3.4e-2327.99Show/hide
Query:  RDLKLDKLATQIR--KLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEI
        RD   D +   +R  +L+ +  L+  ++           I  + R F  +   I  F+ K+P +F+ F  P       R+T +   L +QE  V   S  
Subjt:  RDLKLDKLATQIR--KLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEI

Query:  ETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE--IVEL-VDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFP
        +   RLKKL++MS +  L +  ++ +   LGLPD + +   +     FR VD+E  +  L VD +    V  V Q    + R   +S  +++  FP+   
Subjt:  ETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE--IVEL-VDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFP

Query:  TGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ
         G +++    + L  +Q+LPY  PY+        S       EKR V  LHELL L VE   + ++L+  ++ F +   + +   +HP IFY+S K  T 
Subjt:  TGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ

Query:  IVFLREAYAKGCLVEPNPIYIVRRKM------QDLLLLGRRHT
           LRE Y     VE +P+  VR+K        +L+L  RR++
Subjt:  IVFLREAYAKGCLVEPNPIYIVRRKM------QDLLLLGRRHT

Arabidopsis top hitse value%identityAlignment
AT1G06440.1 Ubiquitin carboxyl-terminal hydrolase family protein7.8e-6338.42Show/hide
Query:  KPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRG--PFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAA
        +   T+   +  R+RD   +KL  + + L  +  +++L +       P +S++ +SR    + L  G   F+ KYPH+F V   P++    CR+T     
Subjt:  KPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRG--PFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAA

Query:  LMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD-----LEIVELVDKHEN--VAVAEVEQWREREFR
        + +QE   I  +    V RL +LL MS++ ++ + A+  + +ELGLPD F +S++ K    F+L D       I+ELV + E      A VE+WR  E  
Subjt:  LMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD-----LEIVELVDKHEN--VAVAEVEQWREREFR

Query:  EKWLS--EFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNI
        ++  S    +++F+F  ++P G ++   F+ K++ WQRLPY  PYE   G   +S  G+   EKRAVA+ HE L+LTVEK+V+VE++ HFR+ F I++NI
Subjt:  EKWLS--EFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNI

Query:  RELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR
        R+L L HPG+FY+STKG    VFLREAY +G L++PNP+Y  RRK+ DL+LLGR
Subjt:  RELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR

AT3G58520.1 Ubiquitin carboxyl-terminal hydrolase family protein2.3e-3832.18Show/hide
Query:  KRGP--FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL-CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLIS
        KR P  F++ + ++ W+  +GL + +  F+ +YP +F  FPH    +L C ++T     L  QEE +    E +TV+RL ++LMM  + T+ + +L  + 
Subjt:  KRGP--FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL-CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLIS

Query:  KELGLPDGFRESILVKYSDDFRLVDLE----IVELVDKHENVAVAEVEQWRE------REFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNW----
         +LGLPD + +++++KY D F  V        ++LV   +  A + +++  E       E R +          FP++FP G+    G ++K++ W    
Subjt:  KELGLPDGFRESILVKYSDDFRLVDLE----IVELVDKHENVAVAEVEQWRE------REFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNW----

Query:  QRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEP
        Q+LPY  PY+        S       EKRAVAVLHELLSLT+ K      L   R +  I      L  ++PGIFY+S K  T  V L+E Y +G LV+P
Subjt:  QRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEP

Query:  NPIYIVRRKMQDLLLLG
        +P+  +R K   ++  G
Subjt:  NPIYIVRRKMQDLLLLG

AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein3.6e-6839.27Show/hide
Query:  TAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL---RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMK
        T   + +DR RD   D      +K+R + K   L++ +     +++ ++      +GL   +   G F+ K+PHVF+++ HP++R L CR+T K    ++
Subjt:  TAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL---RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMK

Query:  QEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHENVAVAEVEQWREREFREKWLS
         E   + D   + V RL+KL+MMS  G + +  +R+   E GLP+ F  S+++K+   FRL+D E      +E+V+K  N+++  +E+ RE E+R K + 
Subjt:  QEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHENVAVAEVEQWREREFREKWLS

Query:  EFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH
          DV+F+F +NFP GFKI   FR  +  WQRLPY  PYE   G+ +RS    +R EKR+VA +HELLSLTVEK + +ER+ HFR    +   ++E LL+H
Subjt:  EFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH

Query:  PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK
         GIFYIST+GN      VFLRE Y +G LVEPN +Y+ RR++ +L+L+  R  K
Subjt:  PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK

AT5G45790.1 Ubiquitin carboxyl-terminal hydrolase family protein2.1e-11658.06Show/hide
Query:  FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPD
        F + ++MSRW+N VGL + +G F+ KYPH F++F HP  +NLCC+IT K   L+ +EENV+ + E++ V+R+KKLL++S +G L +HALRLI KELGLP+
Subjt:  FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPD

Query:  GFRESILVKYSDDFRLVDLEIVELVDK-HENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSC
         FR+SIL KYS +FRLVDLE +ELVD+  E++ VA+VE+WRE E+REKWLS+F+  +AFPI+ PTGFKI+ GFRE+L+NWQR+PY KPY++++       
Subjt:  GFRESILVKYSDDFRLVDLEIVELVDK-HENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSC

Query:  GGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRH
         G+ R EKR VAV+HELLSLTVEK+V+VERL HFR+D  IEVN+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DL+LL  R+
Subjt:  GGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRH

Query:  TKQL-----ESSMEIKEH-ISAADNGDWLSKSEGSWVLPIL
        ++ L     E+  E K   +  + N DW    +G WVLPIL
Subjt:  TKQL-----ESSMEIKEH-ISAADNGDWLSKSEGSWVLPIL

AT5G45790.2 Ubiquitin carboxyl-terminal hydrolase family protein2.8e-13759.05Show/hide
Query:  PFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLC
        P   + QRRW KP  +AQTRLE+RTRD +LDK+  QIRKL II ++ +LM  +KRGPFVSLQ+MSRW+N VGL + +G F+ KYPH F++F HP  +NLC
Subjt:  PFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLC

Query:  CRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDK-HENVAVAEVEQWRER
        C+IT K   L+ +EENV+ + E++ V+R+KKLL++S +G L +HALRLI KELGLP+ FR+SIL KYS +FRLVDLE +ELVD+  E++ VA+VE+WRE 
Subjt:  CRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDK-HENVAVAEVEQWRER

Query:  EFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVN
        E+REKWLS+F+  +AFPI+ PTGFKI+ GFRE+L+NWQR+PY KPY++++        G+ R EKR VAV+HELLSLTVEK+V+VERL HFR+D  IEVN
Subjt:  EFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVN

Query:  IRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQL-----ESSMEIKEH-ISAADNGDWLSKSEGSWVLPIL
        +RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DL+LL  R+++ L     E+  E K   +  + N DW    +G WVLPIL
Subjt:  IRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQL-----ESSMEIKEH-ISAADNGDWLSKSEGSWVLPIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGTTTGAATCCGCATTTTCTCTTTCAACAACTGATTTTTCCAGACTCCGATTCGGTCCCTTCAATCATTTCTGTCAAAGGAGATGGGGAAAGCCAGCGGTGAC
TGCTCAAACTCGTTTAGAAGACAGAACAAGGGACCTTAAGCTCGACAAACTCGCTACCCAAATCAGAAAACTCAGAATAATCTTCAAACTCCGCGAGCTCATGATCGATC
GGAAACGCGGCCCTTTCGTCTCATTACAAATCATGTCTCGATGGCGGAACTTTGTTGGACTCAGAATCGGCATTGGGGACTTCGTTCATAAGTATCCCCATGTGTTCGAC
GTATTTCCGCATCCGCTGAGGAGGAATTTATGCTGTAGAATTACCGGGAAGATGGCCGCCTTGATGAAACAAGAAGAGAATGTTATTAACGATTCCGAAATAGAGACCGT
ACAGCGATTGAAGAAGTTGCTAATGATGTCTGTTAATGGCACTCTCCATATTCATGCGTTGAGGCTAATCAGCAAGGAATTAGGGTTGCCCGATGGGTTTAGGGAATCGA
TTCTTGTGAAGTATTCAGATGATTTCAGATTGGTTGATTTGGAGATTGTTGAGTTAGTTGATAAACATGAGAATGTAGCTGTGGCTGAGGTTGAACAATGGAGGGAGAGA
GAGTTTAGAGAGAAATGGCTAAGCGAATTCGATGTCAAATTTGCGTTTCCCATCAATTTCCCAACTGGGTTTAAAATAAAGGGGGGTTTTAGAGAGAAACTGAGGAATTG
GCAGAGGCTTCCATATGCAAAGCCATATGAGAAGAGACAAGGCTTTGGTGTTCGTTCTTGTGGTGGGATGCATCGCCGTGAGAAGCGAGCTGTGGCTGTTCTTCATGAGC
TTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTGGAACGGCTTGTCCATTTTAGGCGAGATTTCGCCATTGAAGTCAATATCCGTGAGCTTCTACTGAAACACCCGGGG
ATATTCTACATATCAACCAAGGGGAACACCCAAATCGTTTTCCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTTGAGCCCAATCCAATATACATTGTTAGAAGGAAGAT
GCAGGACCTTCTTCTGTTGGGACGTAGACACACCAAGCAGTTGGAATCATCCATGGAAATCAAGGAACATATCAGTGCAGCCGATAATGGAGACTGGTTATCTAAAAGTG
AAGGAAGCTGGGTTTTGCCGATATTACAGGGCTTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGTTTGAATCCGCATTTTCTCTTTCAACAACTGATTTTTCCAGACTCCGATTCGGTCCCTTCAATCATTTCTGTCAAAGGAGATGGGGAAAGCCAGCGGTGAC
TGCTCAAACTCGTTTAGAAGACAGAACAAGGGACCTTAAGCTCGACAAACTCGCTACCCAAATCAGAAAACTCAGAATAATCTTCAAACTCCGCGAGCTCATGATCGATC
GGAAACGCGGCCCTTTCGTCTCATTACAAATCATGTCTCGATGGCGGAACTTTGTTGGACTCAGAATCGGCATTGGGGACTTCGTTCATAAGTATCCCCATGTGTTCGAC
GTATTTCCGCATCCGCTGAGGAGGAATTTATGCTGTAGAATTACCGGGAAGATGGCCGCCTTGATGAAACAAGAAGAGAATGTTATTAACGATTCCGAAATAGAGACCGT
ACAGCGATTGAAGAAGTTGCTAATGATGTCTGTTAATGGCACTCTCCATATTCATGCGTTGAGGCTAATCAGCAAGGAATTAGGGTTGCCCGATGGGTTTAGGGAATCGA
TTCTTGTGAAGTATTCAGATGATTTCAGATTGGTTGATTTGGAGATTGTTGAGTTAGTTGATAAACATGAGAATGTAGCTGTGGCTGAGGTTGAACAATGGAGGGAGAGA
GAGTTTAGAGAGAAATGGCTAAGCGAATTCGATGTCAAATTTGCGTTTCCCATCAATTTCCCAACTGGGTTTAAAATAAAGGGGGGTTTTAGAGAGAAACTGAGGAATTG
GCAGAGGCTTCCATATGCAAAGCCATATGAGAAGAGACAAGGCTTTGGTGTTCGTTCTTGTGGTGGGATGCATCGCCGTGAGAAGCGAGCTGTGGCTGTTCTTCATGAGC
TTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTGGAACGGCTTGTCCATTTTAGGCGAGATTTCGCCATTGAAGTCAATATCCGTGAGCTTCTACTGAAACACCCGGGG
ATATTCTACATATCAACCAAGGGGAACACCCAAATCGTTTTCCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTTGAGCCCAATCCAATATACATTGTTAGAAGGAAGAT
GCAGGACCTTCTTCTGTTGGGACGTAGACACACCAAGCAGTTGGAATCATCCATGGAAATCAAGGAACATATCAGTGCAGCCGATAATGGAGACTGGTTATCTAAAAGTG
AAGGAAGCTGGGTTTTGCCGATATTACAGGGCTTTGATTGA
Protein sequenceShow/hide protein sequence
MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFD
VFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWRER
EFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPG
IFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD