; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G000370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G000370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:248227..249087
RNA-Seq ExpressionCmoCh06G000370
SyntenyCmoCh06G000370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596187.1 hypothetical protein SDJN03_09367, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3171.15Show/hide
Query:  MCSGLASLKKPARPFVCSVNRNNYFKMSSLASPLNGHRSSRMIQQWRCLQNQPSLHCGPTDNLAVEKGDSFSYVFSFRGIPATARLFQRRIVGTFHWNFD
        MCSGLASLKKPARPFVCSVNRNNYFKMSSLASPLNGHRSSRMIQ     +        P   L ++         +FRGIPATARLFQRRIVGTFHWNFD
Subjt:  MCSGLASLKKPARPFVCSVNRNNYFKMSSLASPLNGHRSSRMIQQWRCLQNQPSLHCGPTDNLAVEKGDSFSYVFSFRGIPATARLFQRRIVGTFHWNFD

Query:  HKLV
        HKLV
Subjt:  HKLV

KAG7027726.1 Protein EFR3-like B, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-2795.24Show/hide
Query:  MIQQWRCLQNQPSLHCGPTDNLAVEK-GDSFSYVFSFRGIPATARLFQRRIVGTFHWNFDHKL
        MIQQWRCLQNQPSLHCGPTDNLAVEK GDSF YVFSFRGIPATARLFQ RIVGTFHWNFDHKL
Subjt:  MIQQWRCLQNQPSLHCGPTDNLAVEK-GDSFSYVFSFRGIPATARLFQRRIVGTFHWNFDHKL

KGN59400.1 hypothetical protein Csa_001971 [Cucumis sativus]1.5e-1154.79Show/hide
Query:  SPLNGHRSSRMIQQWRCLQNQPSLHCGPTDNLAVEK-GDSFSYVFSFRGIPATARLFQRRIVGTFHWNFDHKL
        SPLN H SS +IQ+WRCLQ+QPS++CGPTDNLAVEK  D FS+VFS    P      ++RIV +F + ++++L
Subjt:  SPLNGHRSSRMIQQWRCLQNQPSLHCGPTDNLAVEK-GDSFSYVFSFRGIPATARLFQRRIVGTFHWNFDHKL

TrEMBL top hitse value%identityAlignment
A0A0A0LBJ9 Uncharacterized protein7.1e-1254.79Show/hide
Query:  SPLNGHRSSRMIQQWRCLQNQPSLHCGPTDNLAVEK-GDSFSYVFSFRGIPATARLFQRRIVGTFHWNFDHKL
        SPLN H SS +IQ+WRCLQ+QPS++CGPTDNLAVEK  D FS+VFS    P      ++RIV +F + ++++L
Subjt:  SPLNGHRSSRMIQQWRCLQNQPSLHCGPTDNLAVEK-GDSFSYVFSFRGIPATARLFQRRIVGTFHWNFDHKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTTTAGTTATGGTTTGAATTTGACCAAAAAAAGCTCCACACAGATCATGTGCTCTGGTCTTGCAAGCCTTAAGAAGCCAGCACGTCCGTTTGTCTGTTCTGT
CAACCGAAACAATTACTTTAAAATGTCTTCCCTCGCTTCGCCTTTAAACGGCCATCGAAGCTCTCGAATGATCCAGCAATGGCGATGCCTTCAGAATCAACCATCCTTGC
ATTGTGGACCCACAGACAACCTTGCCGTTGAAAAAGGGGATTCTTTCTCGTATGTTTTCAGCTTTAGAGGAATTCCGGCCACTGCTCGGCTGTTTCAGAGAAGGATCGTA
GGTACTTTTCATTGGAATTTTGATCATAAACTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
GTCATCCTTCAAAATGAGATCTTTTGGTGTTTTTTCTTTGACCCTTCCCTCCATCCCTCCTCTGGATCGATATAAAAGCGCTCAAGGGTCGAGAGGAAGGAACATTGGTC
GATGATGTTCGATTGGACATGGCCGATTTTAGTTATGGTTTGAATTTGACCAAAAAAAGCTCCACACAGATCATGTGCTCTGGTCTTGCAAGCCTTAAGAAGCCAGCACG
TCCGTTTGTCTGTTCTGTCAACCGAAACAATTACTTTAAAATGTCTTCCCTCGCTTCGCCTTTAAACGGCCATCGAAGCTCTCGAATGATCCAGCAATGGCGATGCCTTC
AGAATCAACCATCCTTGCATTGTGGACCCACAGACAACCTTGCCGTTGAAAAAGGGGATTCTTTCTCGTATGTTTTCAGCTTTAGAGGAATTCCGGCCACTGCTCGGCTG
TTTCAGAGAAGGATCGTAGGTACTTTTCATTGGAATTTTGATCATAAACTTGTTTGA
Protein sequenceShow/hide protein sequence
MADFSYGLNLTKKSSTQIMCSGLASLKKPARPFVCSVNRNNYFKMSSLASPLNGHRSSRMIQQWRCLQNQPSLHCGPTDNLAVEKGDSFSYVFSFRGIPATARLFQRRIV
GTFHWNFDHKLV