; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G000850 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G000850
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:510372..513543
RNA-Seq ExpressionCmoCh06G000850
SyntenyCmoCh06G000850
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596233.1 hypothetical protein SDJN03_09413, partial [Cucurbita argyrosperma subsp. sororia]4.7e-6067.51Show/hide
Query:  MVSGLRSSGVFILPLNRLALIAWLVKHFPAVAIHIRGVRGKIIRFNCRIFLHFASVLMGILVVLDLTAPIGDNLFCGTQDFGFEGLAQRERRIIIYVMQL
        MVSGLRSSGVF+LPLNRLALIAWLVKHFPAVAIHIRGVR KIIRFNCRIFLHFASVLM                                          
Subjt:  MVSGLRSSGVFILPLNRLALIAWLVKHFPAVAIHIRGVRGKIIRFNCRIFLHFASVLMGILVVLDLTAPIGDNLFCGTQDFGFEGLAQRERRIIIYVMQL

Query:  FGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLKVYSYLDASSIKGVHWRAVQTAIFINELRLSMCK
                           ARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLKVYSYLDASSIKGVHWRAVQTAIF NELRLSMCK
Subjt:  FGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLKVYSYLDASSIKGVHWRAVQTAIFINELRLSMCK

XP_022955135.1 uncharacterized protein LOC111457164 isoform X1 [Cucurbita moschata]2.6e-5096.3Show/hide
Query:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK----VYSYLDASSIKGVHWRA
        LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK    VYSYLDASSIKGVHWRA
Subjt:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK----VYSYLDASSIKGVHWRA

Query:  VQTAIFIN
        VQTAIFIN
Subjt:  VQTAIFIN

XP_022971241.1 uncharacterized protein LOC111470024 isoform X1 [Cucurbita maxima]1.8e-4889.66Show/hide
Query:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW
        LAQRERRIIIYVMQLFGCNY+FKVLPSIDCILGTARFFKSSIFALDNS SFGRLPDWS+ILA RSNEKLNYKNEWRGLK      VYSYLDASSIKGVHW
Subjt:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW

Query:  RAVQTAIFIN-ELRLS
        RAVQTAIFIN ELRL+
Subjt:  RAVQTAIFIN-ELRLS

XP_022971243.1 uncharacterized protein LOC111470024 isoform X2 [Cucurbita maxima]7.5e-5090.43Show/hide
Query:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW
        LAQRERRIIIYVMQLFGCNY+FKVLPSIDCILGTARFFKSSIFALDNS SFGRLPDWS+ILA RSNEKLNYKNEWRGLK      VYSYLDASSIKGVHW
Subjt:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW

Query:  RAVQTAIFINELRLS
        RAVQTAIFINELRL+
Subjt:  RAVQTAIFINELRLS

XP_022971245.1 uncharacterized protein LOC111470024 isoform X3 [Cucurbita maxima]1.8e-4889.66Show/hide
Query:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW
        LAQRERRIIIYVMQLFGCNY+FKVLPSIDCILGTARFFKSSIFALDNS SFGRLPDWS+ILA RSNEKLNYKNEWRGLK      VYSYLDASSIKGVHW
Subjt:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW

Query:  RAVQTAIFIN-ELRLS
        RAVQTAIFIN ELRL+
Subjt:  RAVQTAIFIN-ELRLS

TrEMBL top hitse value%identityAlignment
A0A6J1GUC1 uncharacterized protein LOC111457164 isoform X11.2e-5096.3Show/hide
Query:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK----VYSYLDASSIKGVHWRA
        LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK    VYSYLDASSIKGVHWRA
Subjt:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK----VYSYLDASSIKGVHWRA

Query:  VQTAIFIN
        VQTAIFIN
Subjt:  VQTAIFIN

A0A6J1I2S8 uncharacterized protein LOC111470024 isoform X18.9e-4989.66Show/hide
Query:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW
        LAQRERRIIIYVMQLFGCNY+FKVLPSIDCILGTARFFKSSIFALDNS SFGRLPDWS+ILA RSNEKLNYKNEWRGLK      VYSYLDASSIKGVHW
Subjt:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW

Query:  RAVQTAIFIN-ELRLS
        RAVQTAIFIN ELRL+
Subjt:  RAVQTAIFIN-ELRLS

A0A6J1I2T3 uncharacterized protein LOC111470024 isoform X41.1e-1482.76Show/hide
Query:  VILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHWRAVQTAIFIN-ELRLS
        +ILA RSNEKLNYKNEWRGLK      VYSYLDASSIKGVHWRAVQTAIFIN ELRL+
Subjt:  VILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHWRAVQTAIFIN-ELRLS

A0A6J1I578 uncharacterized protein LOC111470024 isoform X38.9e-4989.66Show/hide
Query:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW
        LAQRERRIIIYVMQLFGCNY+FKVLPSIDCILGTARFFKSSIFALDNS SFGRLPDWS+ILA RSNEKLNYKNEWRGLK      VYSYLDASSIKGVHW
Subjt:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW

Query:  RAVQTAIFIN-ELRLS
        RAVQTAIFIN ELRL+
Subjt:  RAVQTAIFIN-ELRLS

A0A6J1I6A1 uncharacterized protein LOC111470024 isoform X23.6e-5090.43Show/hide
Query:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW
        LAQRERRIIIYVMQLFGCNY+FKVLPSIDCILGTARFFKSSIFALDNS SFGRLPDWS+ILA RSNEKLNYKNEWRGLK      VYSYLDASSIKGVHW
Subjt:  LAQRERRIIIYVMQLFGCNYIFKVLPSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLK------VYSYLDASSIKGVHW

Query:  RAVQTAIFINELRLS
        RAVQTAIFINELRL+
Subjt:  RAVQTAIFINELRLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGGGCTTCGATCTTCAGGCGTTTTCATCTTGCCGCTCAATCGTTTAGCGCTAATCGCTTGGCTTGTAAAGCATTTTCCAGCTGTTGCGATCCATATCAGAGG
CGTGCGCGGCAAGATCATCCGGTTCAATTGCAGGATTTTTCTTCATTTCGCATCTGTTTTGATGGGTATTTTGGTTGTTCTGGATTTGACAGCTCCGATCGGCGATAATC
TGTTTTGTGGTACTCAAGATTTTGGATTTGAGGGATTGGCTCAAAGAGAACGAAGAATAATAATTTATGTTATGCAGCTTTTTGGTTGTAATTACATTTTTAAAGTATTG
CCCTCAATTGATTGTATACTTGGAACAGCGAGATTCTTCAAATCTTCCATATTTGCCTTAGATAATAGTGGTTCTTTTGGGAGATTGCCAGATTGGAGTGTGATACTTGC
CTACCGAAGTAACGAGAAACTAAACTACAAAAATGAGTGGAGGGGTCTCAAGGTCTACTCGTACTTGGATGCTTCATCCATTAAGGGAGTTCATTGGAGAGCTGTTCAGA
CGGCGATCTTCATTAATGAATTGAGATTGAGCATGTGCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTGGGCTTCGATCTTCAGGCGTTTTCATCTTGCCGCTCAATCGTTTAGCGCTAATCGCTTGGCTTGTAAAGCATTTTCCAGCTGTTGCGATCCATATCAGAGG
CGTGCGCGGCAAGATCATCCGGTTCAATTGCAGGATTTTTCTTCATTTCGCATCTGTTTTGATGGGTATTTTGGTTGTTCTGGATTTGACAGCTCCGATCGGCGATAATC
TGTTTTGTGGTACTCAAGATTTTGGATTTGAGGGATTGGCTCAAAGAGAACGAAGAATAATAATTTATGTTATGCAGCTTTTTGGTTGTAATTACATTTTTAAAGTATTG
CCCTCAATTGATTGTATACTTGGAACAGCGAGATTCTTCAAATCTTCCATATTTGCCTTAGATAATAGTGGTTCTTTTGGGAGATTGCCAGATTGGAGTGTGATACTTGC
CTACCGAAGTAACGAGAAACTAAACTACAAAAATGAGTGGAGGGGTCTCAAGGTCTACTCGTACTTGGATGCTTCATCCATTAAGGGAGTTCATTGGAGAGCTGTTCAGA
CGGCGATCTTCATTAATGAATTGAGATTGAGCATGTGCAAGTAGTTCTTTTCTTGATATCCAAGAGCGTCTGGGATGCTTGTGCGCACCTCAACTATTCTCTGGGACAAA
CTCCTTACCCTATTATATTTGGTTGTCAAGTTGCGATGAACCGATGATACAACTTACACAGAACACAAATATTGATACCGCAGCATGAGAGACGAGTGAAGAATTCAGAT
TTTGATGAAGCCAGAATTGAAGCCATAGTTCAATTAGAAGCTACAGAAGGCTAAATTCCAACACTTGGTTATTTTTCTGATCCATTTTACTTTCGTGTTTCCATCGGCTT
GCAGTTGCGTTGAATCAACGATACAGTTTACGCAGAGCTGCATATTGATACAGCAGCATAAGATAAGAGTGAAGAATTCAGAGTTTGATGAAGCAGGAATTGAAGCCATA
GTGCAATTAGAAGCTACAGAGGGCTAAATTTTCACGATGTTGTCTACTATTCATATAGTGCCATAGATATTCATAAGAAAGGCAAACTCTCCCTCCTACCTGGAAGAAAA
AACCCATTAAAGGAAAAGAAAAAACAAAAGAATTTGATCCACTAACATAATAACTTTTTGGTACAACTCAGTAATGGTAAGACATTTCAATATTCAGATTTGGCAATGTG
ATGCTGTTGGGATGGCACTCGCACTGCCACTTGCACTTGGTAGCTCAAGTATCGTTGCTTTTTTCAACTAATTGGCCATGAACATTTGGCTGCGCCCCTTCTGCTATGCA
TTAAAAGAAGATGATTAGATATGGAACATCCACTTCGCT
Protein sequenceShow/hide protein sequence
MVSGLRSSGVFILPLNRLALIAWLVKHFPAVAIHIRGVRGKIIRFNCRIFLHFASVLMGILVVLDLTAPIGDNLFCGTQDFGFEGLAQRERRIIIYVMQLFGCNYIFKVL
PSIDCILGTARFFKSSIFALDNSGSFGRLPDWSVILAYRSNEKLNYKNEWRGLKVYSYLDASSIKGVHWRAVQTAIFINELRLSMCK