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CmoCh06G000920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G000920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPlastid-lipid associated protein PAP / fibrillin family protein
Genome locationCmo_Chr06:543704..544728
RNA-Seq ExpressionCmoCh06G000920
SyntenyCmoCh06G000920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443057.1 PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic isoform X1 [Cucumis melo]3.1e-04100Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQQAAQGAPAIYAKEMERLSAKESLLLA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

XP_008443058.1 PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic isoform X2 [Cucumis melo]3.1e-04100Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQQAAQGAPAIYAKEMERLSAKESLLLA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

XP_011652092.1 probable plastid-lipid-associated protein 13, chloroplastic isoform X1 [Cucumis sativus]3.1e-04100Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQQAAQGAPAIYAKEMERLSAKESLLLA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

XP_022158350.1 probable plastid-lipid-associated protein 13, chloroplastic [Momordica charantia]3.1e-04100Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQQAAQGAPAIYAKEMERLSAKESLLLA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

XP_022971591.1 uncharacterized protein LOC111470266 [Cucurbita maxima]9.7e-0694.12Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLAVSIGV
        MVQQAAQGAP IYAKEMERLSAKESLLL VSIGV
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLAVSIGV

TrEMBL top hitse value%identityAlignment
A0A0A0LEF9 PAP_fibrillin domain-containing protein1.5e-04100Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQQAAQGAPAIYAKEMERLSAKESLLLA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

A0A1S3B757 probable plastid-lipid-associated protein 13, chloroplastic isoform X11.5e-04100Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQQAAQGAPAIYAKEMERLSAKESLLLA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

A0A5D3DPE3 Putative plastid-lipid-associated protein 131.5e-04100Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQQAAQGAPAIYAKEMERLSAKESLLLA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

A0A6J1DVL0 probable plastid-lipid-associated protein 13, chloroplastic1.5e-04100Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQQAAQGAPAIYAKEMERLSAKESLLLA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

A0A6J1I3P6 uncharacterized protein LOC1114702664.7e-0694.12Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLAVSIGV
        MVQQAAQGAP IYAKEMERLSAKESLLL VSIGV
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLAVSIGV

SwissProt top hitse value%identityAlignment
Q8S9M1 Probable plastid-lipid-associated protein 13, chloroplastic1.5e-0473.33Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLAV
        MVQ+  QG+P +YA+EMERLSAKESLLLA+
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLAV

Q9M2P7 Probable plastid-lipid-associated protein 9, chloroplastic4.2e-0472.41Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQ + QG P++YA+EMERLSAKESL+LA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

Arabidopsis top hitse value%identityAlignment
AT2G42130.1 Plastid-lipid associated protein PAP / fibrillin family protein1.0e-0573.33Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLAV
        MVQ+  QG+P +YA+EMERLSAKESLLLA+
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLAV

AT2G42130.2 Plastid-lipid associated protein PAP / fibrillin family protein1.0e-0573.33Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLAV
        MVQ+  QG+P +YA+EMERLSAKESLLLA+
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLAV

AT2G42130.3 Plastid-lipid associated protein PAP / fibrillin family protein1.3e-0575.86Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQ+  QG+P +YA+EMERLSAKESLLLA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA

AT2G42130.4 Plastid-lipid associated protein PAP / fibrillin family protein1.0e-0573.33Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLAV
        MVQ+  QG+P +YA+EMERLSAKESLLLA+
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLAV

AT3G58010.1 plastoglobulin 34kD3.0e-0572.41Show/hide
Query:  MVQQAAQGAPAIYAKEMERLSAKESLLLA
        MVQ + QG P++YA+EMERLSAKESL+LA
Subjt:  MVQQAAQGAPAIYAKEMERLSAKESLLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCAGGCAGCCCAAGGAGCTCCGGCGATTTATGCTAAGGAGATGGAGAGACTCTCTGCTAAGGAATCGCTGCTGTTGGCTGTGAGTATCGGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
CCAATTCCGCCATTTTTCCAGCCTTTCCGATCAACGTTTACTCAAAACGTGAAGCAAATGAAATGAGCAAATAGCGAAGGAAAATTCTTCGCAGTTCCAAAGTAGCCAAG
CTGGGCGAAGAAAAATGGCGGGAAATCCAAAATCCTTTTGAGGAAATGAACAGCGATCTAAGAAATAGAAGAGGCAAAGAGGTACCGATAGATCATAGGGACATTGCTTG
CGCTGGAGAATCTTCTGTGAGTCGATTTCCATGGCGAGGAAGAGAACGAACAGAGCACAAGAATTTTACTCTTCGAATCTCAATTGAGAGACGCGCGTTCGGCAATTCAT
TGGCCCAGGCGACACTCTCCGTTGGAGAAATAAGGCCGCAGATTTCTCTCCCATCGCCTCTACACTCTTCTCTTCCTTCAGTCTCTTCGATTCGTCCCGTCCTTCACCGT
CGGTTTCTCCCAACTGCGCAGCTTCCTTGGTTTCTGACTCCGGACTGCATTCCACTGGACGCAGACGGATTTGTATAGCTATGGTTCAGCAGGCAGCCCAAGGAGCTCCG
GCGATTTATGCTAAGGAGATGGAGAGACTCTCTGCTAAGGAATCGCTGCTGTTGGCTGTGAGTATCGGTGTTTGAGTTTCTTAATGTTTTAAAGTATTGTTGATTTGTTT
CGCTTCAACGATCGCGATGATAGTAGAGCATAGTATAGACCGAGAATTATGTATGTATATCGATGATTTTTGTGTTTTGATGTTCATGTTCCTTTACTCCGTGAATTATA
CGTTTCGTAGTGAAAATTGAAAACATGCTTGATTTAATCGTGTTTTGTTGTCGACAAGCTACTTCGTGT
Protein sequenceShow/hide protein sequence
MVQQAAQGAPAIYAKEMERLSAKESLLLAVSIGV