CuGenDBv2

Gene ID	CmoCh06G001490
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	Cmo_Chr06:800677..805253
RNA-Seq Expression	CmoCh06G001490
Synteny	CmoCh06G001490
Gene Ontology terms	GO:0048767 - root hair elongation (biological process) GO:0071816 - tail-anchored membrane protein insertion into ER membrane (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043529 - GET complex (cellular component) GO:0043621 - protein self-association (molecular function)
InterPro domains	IPR028945 - Get1 family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596276.1 hypothetical protein SDJN03_09456, partial [Cucurbita argyrosperma subsp. sororia]

8.7e-90

99.44

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Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        MEAEEIVEHRNSIVAPSIF IVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
        GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN

XP_008448478.1 PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]

7.6e-78

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Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        MEAE IVEH +SI AP IF IVI FQFLA WL+HLKK GSN+QVE+ELRKSIKQLLREASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        GLYS+VLLISKV+IYIVLVCWFWRASVATVPHHLVQPFG+FLSW+AGGTVNDYVKVGIIPWLILSTRVSKFVC+V
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV

XP_022945757.1 uncharacterized protein LOC111449636 [Cucurbita moschata]

3.0e-90

100

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Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
        GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN

XP_022971588.1 uncharacterized protein LOC111470261 [Cucurbita maxima]

9.6e-89

98.31

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Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRR AAAKEKELANYQESRSKK+KSSY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
        GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGG VNDYVKVGIIPWLILSTRVSKFVCRVAN
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN

XP_023539852.1 uncharacterized protein LOC111800404 [Cucurbita pepo subsp. pepo]

8.7e-90

99.44

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Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSK+IKSSY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
        GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4T9 Uncharacterized protein

4.8e-78

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Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        GLYS+VLL+SKV+I+IVLVCWFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV

A0A1S3BKE1 uncharacterized protein LOC103490650

3.7e-78

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Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        MEAE IVEH +SI AP IF IVI FQFLA WL+HLKK GSN+QVE+ELRKSIKQLLREASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        GLYS+VLLISKV+IYIVLVCWFWRASVATVPHHLVQPFG+FLSW+AGGTVNDYVKVGIIPWLILSTRVSKFVC+V
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV

A0A6J1G1T6 uncharacterized protein LOC111449636

1.4e-90

100

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Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
        GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN

A0A6J1I7A9 uncharacterized protein LOC111470261

4.6e-89

98.31

Show/hide

Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRR AAAKEKELANYQESRSKK+KSSY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
        GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGG VNDYVKVGIIPWLILSTRVSKFVCRVAN
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN

A0A6J1L884 uncharacterized protein LOC111500212

2.6e-76

87.93

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Query:  EAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSYG
        EAE IVEHR+SI AP IFLIVIAFQFLA WL+HLKK GSN+QVEMELRKSIKQLLREASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SYG
Subjt:  EAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSYG

Query:  LYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        LYSRVLLISKV +YI LV WFWR SVATVPHHLVQPFGR LSW+AGG VNDYVKVGIIPWLILSTRVSKFVC+V
Subjt:  LYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV

SwissProt top hits

e value

%identity

Alignment

Q1H5D2 Protein GET1

8.8e-53

61.49

Show/hide

Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        ME E+++E R  + AP  F++V+ FQ L+ WLD LKK+GS N  E ELR  IKQLLREAS LSQP+TFAQAAKLRRSAA KEKELA Y E   K+IK SY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCR
         +Y + LL SKV+IY++LV  FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+VCR
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCR

Arabidopsis top hits

e value

%identity

Alignment

AT4G16444.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

6.3e-54

61.49

Show/hide

Query:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY
        ME E+++E R  + AP  F++V+ FQ L+ WLD LKK+GS N  E ELR  IKQLLREAS LSQP+TFAQAAKLRRSAA KEKELA Y E   K+IK SY
Subjt:  MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSY

Query:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCR
         +Y + LL SKV+IY++LV  FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+VCR
Subjt:  GLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGCGGAAGAAATCGTAGAGCATCGGAACTCGATTGTGGCTCCGTCCATTTTTTTGATCGTCATTGCTTTTCAGTTTCTCGCCGGATGGCTGGATCACCTAAAGAA
GCGAGGTTCCAACAACCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAACCATCTACATTTGCACAAGCTGCAAAAC
TTCGGAGATCGGCTGCCGCTAAGGAGAAGGAACTGGCAAATTATCAAGAATCACGTAGTAAGAAGATCAAGTCGTCATATGGTTTATATAGTCGAGTACTGCTGATATCA
AAGGTTTTGATATATATTGTTCTGGTTTGCTGGTTTTGGAGGGCTTCTGTTGCCACTGTGCCCCATCACCTTGTACAGCCATTTGGAAGATTTTTATCTTGGAGGGCTGG
AGGTACCGTAAATGATTACGTGAAGGTTGGAATCATACCTTGGTTGATACTATCGACAAGGGTTAGCAAATTTGTATGTCGAGTCGCCAATTAA

mRNA sequence

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ACTTCTGTTCTTGTTAAGATATTTTCTTTCTTCCATTAAAACGCTGCGTTTTGTATCCCAACAACTTGGGCTGGGCCTTGGATTTGAAGCCCATTTTTTATTACGGAGCC
CAATGCCTGGCCCAACTTCTTCCTGAATAACCTTCGTCGTCGCAAGATTTTTGGATTCGTTAATTTACGGTGGCGCTAAAGAGAACCTCCGGAAATGGAAGCGGAAGAAA
TCGTAGAGCATCGGAACTCGATTGTGGCTCCGTCCATTTTTTTGATCGTCATTGCTTTTCAGTTTCTCGCCGGATGGCTGGATCACCTAAAGAAGCGAGGTTCCAACAAC
CAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAACCATCTACATTTGCACAAGCTGCAAAACTTCGGAGATCGGCTGC
CGCTAAGGAGAAGGAACTGGCAAATTATCAAGAATCACGTAGTAAGAAGATCAAGTCGTCATATGGTTTATATAGTCGAGTACTGCTGATATCAAAGGTTTTGATATATA
TTGTTCTGGTTTGCTGGTTTTGGAGGGCTTCTGTTGCCACTGTGCCCCATCACCTTGTACAGCCATTTGGAAGATTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGAT
TACGTGAAGGTTGGAATCATACCTTGGTTGATACTATCGACAAGGGTTAGCAAATTTGTATGTCGAGTCGCCAATTAAAAAAGTAATTGAAGGTAAAATGTGATGTTGAT
GATCACATGCTCTGTAAATTATTTGGCAAGCGCGATGTTTTCCTAAATTTCAATGCACAGGGAGGCTGGAGAAGTTTATACAGCCCCCACCACTTTTTCTTTTTATGTTC
AAATGAGCTTCATCATTGTCGTTTTTTCCCCTTTTTTTCTCTCCCATATATTCCATTCATTCTTTTTTTTGGTTGACTCTTGCTCTTAGGTATCGTTTACATGTTTTTTC
GTTACTTCATAGAATTACGATATTCGATATATAGCTTGGTTGCATATGCACAGAGTAAGGGGTGGTTTGTTTGCATTTGTATCTTTTCGGGATGAAAATATTGAATATGT
AGGATCCCGTTTGATAACGATTTTGTTTTCCGTTTCTTGTGAGTATTTTTTGTAACTGGTTTTGTT

Protein sequence

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MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSYGLYSRVLLIS
KVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN

CmoCh06G001490 (gene) of Cucurbita moschata (Rifu) v1 genome