; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G001590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G001590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-H2 finger protein ATL8
Genome locationCmo_Chr06:852721..853305
RNA-Seq ExpressionCmoCh06G001590
SyntenyCmoCh06G001590
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596287.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]1.2e-10399.48Show/hide
Query:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
        MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
Subjt:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE

Query:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
        KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHN EEEQKRREDNNGNNRGLGFLP
Subjt:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP

KAG7027836.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-8898.8Show/hide
Query:  MESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIRQLPQCGHC
        MESDFVVILAALLCALICMVGLIAVARCAWLRRG+NGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIRQLPQCGHC
Subjt:  MESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIRQLPQCGHC

Query:  FHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
        FHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHN EEEQKRREDNNGNNRGLGFLP
Subjt:  FHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP

XP_022933605.1 RING-H2 finger protein ATL8 [Cucurbita moschata]1.8e-104100Show/hide
Query:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
        MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
Subjt:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE

Query:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
        KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
Subjt:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP

XP_022971423.1 RING-H2 finger protein ATL8 [Cucurbita maxima]9.2e-10196.91Show/hide
Query:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
        MTRY QALAGNTSSATATATAPPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGE 
Subjt:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE

Query:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
        KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG+FPAVVHG DHN+EEEQKRREDNNGNNRGLGFLP
Subjt:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP

XP_023539225.1 RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]1.8e-10197.42Show/hide
Query:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
        MTRYFQALAGNTSSATATATAPPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRGSN GGAGNQASANRGLKKKILQSLPKF YRASGSGGE 
Subjt:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE

Query:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
        KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHN+EEEQKRREDNNGNNRGLGFLP
Subjt:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L622 RING-type domain-containing protein4.8e-7175.51Show/hide
Query:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
        M+ Y +AL  NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR       GNQASANRGLKKKILQSLPKF Y++  + G+ 
Subjt:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE

Query:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG--DHNDEEEQKRREDNNGNNRGLGFLP
        K AAECAICLAEFL+GEEIRQLPQCGHCFHVSCVDTWL +HSSCPSCRQILVVARCQKCG+FPA V GG   +N+EEE +   +NN NNRGLGFLP
Subjt:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG--DHNDEEEQKRREDNNGNNRGLGFLP

A0A1S3BKT0 RING-H2 finger protein ATL804.3e-7277.04Show/hide
Query:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
        M+ Y +AL  NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR       GNQASANRGLKKKILQSLPKF Y++  + G+ 
Subjt:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE

Query:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG--DHNDEEEQKRREDNNGNNRGLGFLP
        K AAECAICLAEFL+GEEIRQLPQCGHCFHVSCVDTWL +HSSCPSCRQILVVARCQKCG+FPAVV GG  D+N+EEE    EDNN +NRGLGFLP
Subjt:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG--DHNDEEEQKRREDNNGNNRGLGFLP

A0A5D3CJ22 RING-H2 finger protein ATL804.3e-7277.04Show/hide
Query:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
        M+ Y +AL  NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR       GNQASANRGLKKKILQSLPKF Y++  + G+ 
Subjt:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE

Query:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG--DHNDEEEQKRREDNNGNNRGLGFLP
        K AAECAICLAEFL+GEEIRQLPQCGHCFHVSCVDTWL +HSSCPSCRQILVVARCQKCG+FPAVV GG  D+N+EEE    EDNN +NRGLGFLP
Subjt:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG--DHNDEEEQKRREDNNGNNRGLGFLP

A0A6J1F5B4 RING-H2 finger protein ATL88.6e-105100Show/hide
Query:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
        MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
Subjt:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE

Query:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
        KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
Subjt:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP

A0A6J1I6T7 RING-H2 finger protein ATL84.4e-10196.91Show/hide
Query:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE
        MTRY QALAGNTSSATATATAPPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGE 
Subjt:  MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEE

Query:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
        KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG+FPAVVHG DHN+EEEQKRREDNNGNNRGLGFLP
Subjt:  KFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL441.7e-4160.81Show/hide
Query:  APPP----EAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRA----SGSGGEEKFAAECAICLAE
        APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR + G   G+  S N+GLKKK LQSLP+  + A    SG+  EE  + ECAICL +
Subjt:  APPP----EAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRA----SGSGGEEKFAAECAICLAE

Query:  FLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG
        F DGEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG
Subjt:  FLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG

Q8LC69 RING-H2 finger protein ATL84.5e-4254.29Show/hide
Query:  ATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQ-----ASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLA
        A +T+P   +    SD V+ILA LLCAL C++GLIAV+RCAWLRR ++   +        A+AN+GLKKK+L+SLPK  Y       E+    ECAICL 
Subjt:  ATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQ-----ASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLA

Query:  EFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGN
        EF  G+E+R LPQCGH FHVSC+DTWL SHSSCPSCRQILVV RC KCG  P     G   D    K+RED   N
Subjt:  EFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGN

Q9LM69 RING-H2 finger protein ATL808.2e-4458.19Show/hide
Query:  AMESDFVVILAALLCALICMVGLIAVARCAWLRR--GSNGGGAGNQ--------ASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGE
        A+ SD VVILAALLCALIC++GLIAV+RC WLRR    N   +G+Q        A+AN+GLKKK+LQSLPK  + +  S   EKF AECAICLAEF  G+
Subjt:  AMESDFVVILAALLCALICMVGLIAVARCAWLRR--GSNGGGAGNQ--------ASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGE

Query:  EIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
        E+R LPQCGH FHV+C+DTWL SHSSCPSCRQILVVARC KCG  P     G  ++ E + R +   G +    FLP
Subjt:  EIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP

Q9LZV8 RING-H2 finger protein ATL743.8e-2552.38Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRG---SNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIRQLPQCG
        +++ V+ILAALLCALI  +GL ++ RCA +R G   S+   AG  A    GLKK+ L+  P   Y   GSG  +  A ECAICL EF DGE +R LP C 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRG---SNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIRQLPQCG

Query:  HCFHVSCVDTWLSSHSSCPSCRQILV
        H FH+SC+DTWL SHSSCP+CR  L+
Subjt:  HCFHVSCVDTWLSSHSSCPSCRQILV

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL459.4e-4054.27Show/hide
Query:  TSSATATATAPPPEAV-AMESDFVVILAALLCALICMVGLIAVARCAWLRR--GSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSG-----------
        +S    TA+ PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G N    G     N+GLKKK LQ+LPK  Y AS S            
Subjt:  TSSATATATAPPPEAV-AMESDFVVILAALLCALICMVGLIAVARCAWLRR--GSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSG-----------

Query:  -GEEKFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG
         G+   + ECAIC+ EF +GEEIR LP C H FHV+C+D WL+S SSCPSCR+ILV  +C +CG
Subjt:  -GEEKFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein5.8e-4558.19Show/hide
Query:  AMESDFVVILAALLCALICMVGLIAVARCAWLRR--GSNGGGAGNQ--------ASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGE
        A+ SD VVILAALLCALIC++GLIAV+RC WLRR    N   +G+Q        A+AN+GLKKK+LQSLPK  + +  S   EKF AECAICLAEF  G+
Subjt:  AMESDFVVILAALLCALICMVGLIAVARCAWLRR--GSNGGGAGNQ--------ASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGE

Query:  EIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP
        E+R LPQCGH FHV+C+DTWL SHSSCPSCRQILVVARC KCG  P     G  ++ E + R +   G +    FLP
Subjt:  EIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP

AT1G76410.1 RING/U-box superfamily protein3.2e-4354.29Show/hide
Query:  ATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQ-----ASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLA
        A +T+P   +    SD V+ILA LLCAL C++GLIAV+RCAWLRR ++   +        A+AN+GLKKK+L+SLPK  Y       E+    ECAICL 
Subjt:  ATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQ-----ASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLA

Query:  EFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGN
        EF  G+E+R LPQCGH FHVSC+DTWL SHSSCPSCRQILVV RC KCG  P     G   D    K+RED   N
Subjt:  EFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGN

AT2G17450.1 RING-H2 finger A3A1.2e-4260.81Show/hide
Query:  APPP----EAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRA----SGSGGEEKFAAECAICLAE
        APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR + G   G+  S N+GLKKK LQSLP+  + A    SG+  EE  + ECAICL +
Subjt:  APPP----EAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRA----SGSGGEEKFAAECAICLAE

Query:  FLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG
        F DGEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG
Subjt:  FLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG

AT4G35480.1 RING-H2 finger A3B6.7e-4154.27Show/hide
Query:  TSSATATATAPPPEAV-AMESDFVVILAALLCALICMVGLIAVARCAWLRR--GSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSG-----------
        +S    TA+ PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G N    G     N+GLKKK LQ+LPK  Y AS S            
Subjt:  TSSATATATAPPPEAV-AMESDFVVILAALLCALICMVGLIAVARCAWLRR--GSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSG-----------

Query:  -GEEKFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG
         G+   + ECAIC+ EF +GEEIR LP C H FHV+C+D WL+S SSCPSCR+ILV  +C +CG
Subjt:  -GEEKFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCG

AT5G01880.1 RING/U-box superfamily protein2.7e-2652.38Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRG---SNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIRQLPQCG
        +++ V+ILAALLCALI  +GL ++ RCA +R G   S+   AG  A    GLKK+ L+  P   Y   GSG  +  A ECAICL EF DGE +R LP C 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRG---SNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIRQLPQCG

Query:  HCFHVSCVDTWLSSHSSCPSCRQILV
        H FH+SC+DTWL SHSSCP+CR  L+
Subjt:  HCFHVSCVDTWLSSHSSCPSCRQILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCTACTTCCAAGCTTTGGCCGGGAATACTTCCTCGGCGACGGCGACAGCGACGGCGCCGCCCCCAGAGGCGGTGGCTATGGAGTCGGACTTCGTGGTGATTCT
GGCGGCGCTACTGTGTGCTCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGGCGTGGCAGTAACGGTGGCGGTGCAGGAAATCAGGCGTCAG
CGAACAGGGGATTGAAGAAGAAAATCCTGCAATCCCTCCCGAAATTCGCGTACAGAGCATCGGGGTCGGGCGGAGAAGAGAAATTCGCGGCGGAATGTGCGATCTGCCTG
GCGGAGTTCCTAGACGGGGAGGAGATCCGACAACTGCCGCAGTGTGGCCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTGAGCTCCCACTCGTCCTGCCCCTCTTG
CCGCCAGATTCTGGTAGTCGCCAGATGCCAGAAGTGCGGCGAGTTCCCGGCCGTCGTCCACGGCGGCGATCACAACGACGAGGAGGAGCAAAAGAGGAGGGAAGATAACA
ACGGTAACAACAGAGGTTTGGGATTTTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCGCTACTTCCAAGCTTTGGCCGGGAATACTTCCTCGGCGACGGCGACAGCGACGGCGCCGCCCCCAGAGGCGGTGGCTATGGAGTCGGACTTCGTGGTGATTCT
GGCGGCGCTACTGTGTGCTCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGGCGTGGCAGTAACGGTGGCGGTGCAGGAAATCAGGCGTCAG
CGAACAGGGGATTGAAGAAGAAAATCCTGCAATCCCTCCCGAAATTCGCGTACAGAGCATCGGGGTCGGGCGGAGAAGAGAAATTCGCGGCGGAATGTGCGATCTGCCTG
GCGGAGTTCCTAGACGGGGAGGAGATCCGACAACTGCCGCAGTGTGGCCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTGAGCTCCCACTCGTCCTGCCCCTCTTG
CCGCCAGATTCTGGTAGTCGCCAGATGCCAGAAGTGCGGCGAGTTCCCGGCCGTCGTCCACGGCGGCGATCACAACGACGAGGAGGAGCAAAAGAGGAGGGAAGATAACA
ACGGTAACAACAGAGGTTTGGGATTTTTGCCTTGA
Protein sequenceShow/hide protein sequence
MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICL
AEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRREDNNGNNRGLGFLP