; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G001780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G001780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:974774..981223
RNA-Seq ExpressionCmoCh06G001780
SyntenyCmoCh06G001780
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596304.1 hypothetical protein SDJN03_09484, partial [Cucurbita argyrosperma subsp. sororia]4.8e-7697.44Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
        MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSD APVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN

Query:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET
        VSEAGNGKPLDTN GNRTEGGLQSSN EICDGVPDNKKCRDQKKLVACIQNNIIE+
Subjt:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET

KAG7027858.1 hypothetical protein SDJN02_09035 [Cucurbita argyrosperma subsp. argyrosperma]9.7e-7798.08Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
        MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN

Query:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET
        VSEAGNGKPLDTN GNRTEGGLQSSN EICDGVPDNKKCRDQKKLVACIQNNIIE+
Subjt:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET

XP_022941631.1 uncharacterized protein LOC111446930 [Cucurbita moschata]2.3e-7899.36Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
        MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN

Query:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET
        VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIE+
Subjt:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET

XP_022971211.1 uncharacterized protein LOC111470002 [Cucurbita maxima]1.0e-7394.87Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
        MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSS NHSDSAPVDGKK+REPPPPAPNNSSSNLDSKGLNNSSSGSSHN
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN

Query:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET
        VSEAGNGKPLDTN  NRTEGGLQSSN EICDGVPDNKKCRDQKKLVACI++NIIE+
Subjt:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET

XP_023540201.1 uncharacterized protein LOC111800645 [Cucurbita pepo subsp. pepo]3.1e-7596.79Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
        MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQRE PPPAPNNSSSNLDSKGLNNSSSGSSHN
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN

Query:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET
        VSEAGNGKPLDTN GNRTEGGLQSSN EICDGVPDNKKCRDQKKLVACIQ+NIIE+
Subjt:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET

TrEMBL top hitse value%identityAlignment
A0A6J1DSQ9 uncharacterized protein LOC111024051 isoform X13.0e-4771.34Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGS-SH
        MAMR D FLALFF YAVVSEVT+ASLWDSRKLLDPA KDN+T TS V P+I+P SS N+SDS PV+GKK  EPPPPA NNS SN+DSK L+NSSSGS   
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGS-SH

Query:  NVSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET
         VSE GNGKP  T   N TE G QSSN E CDG+ D KKCRDQKKLVACI++N+IE+
Subjt:  NVSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET

A0A6J1F4I5 uncharacterized protein LOC1114420921.4e-4968.42Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDG-KKQREPPPPAPNNSSSNLDSKGLNNSSSGSSH
        MAMR DCFLALF C+AVVSEVTNASLWDSRKLL+PAS +NST TS   P+ISP SS N SDSAPV G KKQ EPPPP+PNNSSS+L+S  LNNSSS SS 
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDG-KKQREPPPPAPNNSSSNLDSKGLNNSSSGSSH

Query:  NVSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIETNFKSQHYQADDEDT
         VSE G+GKP+DT   N TE    SS HE CDGVPDNKKCRDQ KL+ACIQ+N+IE+   +     + EDT
Subjt:  NVSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIETNFKSQHYQADDEDT

A0A6J1FLM5 uncharacterized protein LOC1114469301.1e-7899.36Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
        MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN

Query:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET
        VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIE+
Subjt:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET

A0A6J1I2Q4 uncharacterized protein LOC1114700024.9e-7494.87Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN
        MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSS NHSDSAPVDGKK+REPPPPAPNNSSSNLDSKGLNNSSSGSSHN
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHN

Query:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET
        VSEAGNGKPLDTN  NRTEGGLQSSN EICDGVPDNKKCRDQKKLVACI++NIIE+
Subjt:  VSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIET

A0A6J1J516 uncharacterized protein LOC1114814261.9e-4969.59Show/hide
Query:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDG-KKQREPPPPAPNNSSSNLDSKGLNNSSSGSSH
        MAMR DCFLALF CYAVVSEVTNASLWDSRKLL+PAS +NST TS   PLISP SS N SDSAPV G KKQ EPPPPAPNNSSS+L+S  +NNSSSGSS 
Subjt:  MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDG-KKQREPPPPAPNNSSSNLDSKGLNNSSSGSSH

Query:  NVSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIETNFKSQHYQADDEDT
         VSE G+GKP DT     TE    SS HE CDGVPDN KCRDQKKL+ACIQ+N+IE+   +     + EDT
Subjt:  NVSEAGNGKPLDTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIETNFKSQHYQADDEDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGCGTGGAGATTGTTTTCTGGCATTGTTTTTCTGTTATGCAGTTGTTTCGGAGGTAACCAATGCGTCGCTTTGGGATTCAAGAAAGTTGTTAGACCCGGCTTC
AAAAGATAACTCCACCGGAACGTCACCTGTTTTGCCTCTCATCAGTCCGAATTCTTCTACGAATCACTCGGATTCTGCACCCGTTGATGGAAAGAAGCAACGTGAACCAC
CCCCGCCTGCACCCAACAACTCATCGTCTAATCTGGATTCGAAAGGACTCAATAATTCGAGTTCTGGTAGTTCGCATAATGTTAGCGAGGCTGGTAATGGTAAGCCTTTG
GACACAAACAATGGAAACAGGACTGAAGGCGGTCTTCAATCAAGTAATCATGAAATTTGTGATGGTGTACCCGACAACAAGAAGTGCAGGGACCAGAAGAAGTTGGTTGC
TTGCATTCAAAATAATATAATTGAGACCAATTTCAAGAGTCAACATTATCAAGCTGATGATGAGGATACTTACTTGGTCTTAACACTTGCCTTCAAAGAGCTGATTTCTC
ATGAGCTAATCATCAGAATCCCTGGAGCGTTTGTCAAGAAGGGCTCGACTCAGATAGTCAAATAG
mRNA sequenceShow/hide mRNA sequence
TTAGGGCCCATGGATCTGTCAATGTCTTTATTGGGCCTTGCCTTTTCATAGGCCCAATAGACTAAGAATAAAATGCCCGCTAATTACCGCAAATTCTGAAGGAAGCATCG
ATAAAATTCTTTCCCCGCCACGGTTCTTCTCATCAATCTGTGTCAACAACCATCAACTTGGAAATCCTGAATATAAGGAAATCCCAGAATTTGGAGCTTTTGAGAAATTT
CCCCTCAAAATCATCTTACAGTTTCTTGCAATTCTGTGTACGCTGCTTAAATCTGGGCTGTGTTTCTAAGCTGGAGAGAATATGTGGTGTATTTGATTGTGTTCAATTCT
CGGAGAATGAAATTAGCAAGAGTGATTTCTGTCATTTCCAATCTTCAAGGCTAGAGAATTATCCTGATTTGGTTTGGATTCGATGGCTATGCGTGGAGATTGTTTTCTGG
CATTGTTTTTCTGTTATGCAGTTGTTTCGGAGGTAACCAATGCGTCGCTTTGGGATTCAAGAAAGTTGTTAGACCCGGCTTCAAAAGATAACTCCACCGGAACGTCACCT
GTTTTGCCTCTCATCAGTCCGAATTCTTCTACGAATCACTCGGATTCTGCACCCGTTGATGGAAAGAAGCAACGTGAACCACCCCCGCCTGCACCCAACAACTCATCGTC
TAATCTGGATTCGAAAGGACTCAATAATTCGAGTTCTGGTAGTTCGCATAATGTTAGCGAGGCTGGTAATGGTAAGCCTTTGGACACAAACAATGGAAACAGGACTGAAG
GCGGTCTTCAATCAAGTAATCATGAAATTTGTGATGGTGTACCCGACAACAAGAAGTGCAGGGACCAGAAGAAGTTGGTTGCTTGCATTCAAAATAATATAATTGAGACC
AATTTCAAGAGTCAACATTATCAAGCTGATGATGAGGATACTTACTTGGTCTTAACACTTGCCTTCAAAGAGCTGATTTCTCATGAGCTAATCATCAGAATCCCTGGAGC
GTTTGTCAAGAAGGGCTCGACTCAGATAGTCAAATAGTCCAAAGATTTGGCTGTTCTAGTCCTGAACAAAGGAGAAGATACGCTAGATGTGAATGTTACTGGAGGAAACT
TTTTCAAGGGGCTTAAGATTTTAAAACATCATTCAAAAAGGATCACCATTCCACTGACGACCTTAAAAGACATGAAATTAGTATTAGATGCTGGAAATGGGGAATGTGTG
CTTTACACAAGCCCTCTTGTTTCTGGAGAAGACCTTTTTCTGCATCTCCCTTCATTTGACCAGCTAGTAACACCAGTCAACGGTGCTTACTTCTTAATTCTTGCAGTCCT
AATCTTTGGGGGGTCCTGGGCTTGCTTCAAGCTTAGGAGGAGACAAGCAGGTGGTATCCCATATCAAGAGCTTGAAATGGCACTGCCAGAATCTTCCTCCGCTGTCAAAG
TTGAAACTGCTGAAGGTTGGGATCAGGGTTGGGATGATGACTGGGATGAAGAAAACGCTGTGAAATCGCCAGGAGGGCGCCATATTGGAAGCATTTCAGCTAATGGCCTT
ACTGCTAGACCCAACAAAGATGGGTGGGAGAATGATTGGGATGTTTAGTTAATCAAGCAACCATAAGAGAACAAAACTTTCTGGTCCCTCGACAATCAAGCAACCATGAA
AGGGGACAATGTGAAGCACATAATGTTACCACTGAGGTCATTCCCTGGTTGAATGTAAACCTTCCTCCCATTTCTGATTAGATTATAGAATTTGTAGCTATCTCATCCTC
TGTCAGAAGCCATAATAGCCGATCTGGTCCATACAAGTTTTTGGGCTTGTTTTGGTGGGATGTAGAATGCATGTCTCTTTATGCCTTTTCCTTTTTCCTTTTTCCTTTTT
TGAATTCCTACTTTAAGAATAGAGTTCCCATATTTTTACATGATAGCTTACAATATATAAATGTTCATGTAAAATTATGATGGTGTCTGCCATTACAAGACCTTGCCAAG
AGAACCGTAAATAACACAATGCACACTCTTCTGGATTACATTTTTTGTATTGATGACCAGGGAGCATTACCTCTCATGAATTGTCACGCCTGAATCTTACCTTCGCGTGG
TTTTTCCTTTTAGATGAATGTCGGGGTTAGCTGTGCAATTGGGGTCTTGTCTCTCACTGAAGCAAAAGAGCAGAGAGGAAGGCTGATGTAATAATTCTGTTTCCTTCGTT
ATGCTCTTATAAAGTTGTTCCTTCTTTTTTGCTTATTAATTCTCATTTTCTAAATAAACTGCGTTG
Protein sequenceShow/hide protein sequence
MAMRGDCFLALFFCYAVVSEVTNASLWDSRKLLDPASKDNSTGTSPVLPLISPNSSTNHSDSAPVDGKKQREPPPPAPNNSSSNLDSKGLNNSSSGSSHNVSEAGNGKPL
DTNNGNRTEGGLQSSNHEICDGVPDNKKCRDQKKLVACIQNNIIETNFKSQHYQADDEDTYLVLTLAFKELISHELIIRIPGAFVKKGSTQIVK