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CmoCh06G002010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G002010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDCD domain-containing protein
Genome locationCmo_Chr06:1085552..1092280
RNA-Seq ExpressionCmoCh06G002010
SyntenyCmoCh06G002010
Gene Ontology termsGO:0034976 - response to endoplasmic reticulum stress (biological process)
InterPro domainsIPR013989 - Development/cell death domain
IPR044832 - DCD domain-containing protein NRP-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580447.1 Kelch-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1841.52Show/hide
Query:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------
        R L+ I EAASSGQ NINPYGWTTDGSERTLYPAQ                                                                 
Subjt:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------

Query:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                        IK QI EEHFDL SQV DAVDVTSSLDA NSA GAH  ANE++ E K R+LHKLQ
Subjt:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

KAG7017201.1 Kelch-like protein 8 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-1841.52Show/hide
Query:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------
        R L+ I EAASSGQ NINPYGWTTDGSERTLYPAQ                                                                 
Subjt:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------

Query:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                        IK QI EEHFDL SQV DAVDVTSSLDA NSA GAH  ANE++ E K R+LHKLQ
Subjt:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

XP_022157257.1 influenza virus NS1A-binding protein homolog [Momordica charantia]2.9e-1941.86Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ----------------------------------------------------------------
        NR LH I EAAS GQ NINPYGWTTDGSERTLYPAQ                                                                
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ----------------------------------------------------------------

Query:  -----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                         IKP+I EEHFDLASQVSD VDV SSLDA N AF AH DAN AN EE+YR+  KLQ
Subjt:  -----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

XP_022934311.1 influenza virus NS1A-binding protein homolog [Cucurbita moschata]4.3e-1841.52Show/hide
Query:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------
        R L+ I EAASSGQ NINPYGWTTDGSERTLYPAQ                                                                 
Subjt:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------

Query:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                        IK QI EEHFDL SQV DAVDVTSSLDA NSA GAH  ANE++ E K R+LHKLQ
Subjt:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

XP_038905252.1 kelch-like protein 36 [Benincasa hispida]1.6e-2043.27Show/hide
Query:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------
        R LH I EAASSGQ NINPYGWTTDGSERTLYPAQ                                                                 
Subjt:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------

Query:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                        IKPQI E  FDLASQV+D VDV SSLDA NS FGAH DANEAN EEK R+LHKLQ
Subjt:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

TrEMBL top hitse value%identityAlignment
A0A0A0L9S8 DCD domain-containing protein1.6e-1538.01Show/hide
Query:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------
        R LH I EAASSGQ NIN YGWT DGSERT YPAQ                                                                 
Subjt:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------

Query:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                        IKPQ  +  +DLASQV+D +DVTSSLDA NSAF  H D NE N EEK R+LHKLQ
Subjt:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

A0A5D3DNS2 Kelch-like protein 2 isoform X24.0e-1437.21Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ----------------------------------------------------------------
        +R LH I EAASSGQ NIN YGWT DG+ERT YPAQ                                                                
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ----------------------------------------------------------------

Query:  -----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                         IKPQI +   DLASQ +D +DVTSSLDA NSAFGAH DANE N EE+  +LHKL+
Subjt:  -----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

A0A6J1DU24 influenza virus NS1A-binding protein homolog1.4e-1941.86Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ----------------------------------------------------------------
        NR LH I EAAS GQ NINPYGWTTDGSERTLYPAQ                                                                
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ----------------------------------------------------------------

Query:  -----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                         IKP+I EEHFDLASQVSD VDV SSLDA N AF AH DAN AN EE+YR+  KLQ
Subjt:  -----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

A0A6J1F1G5 influenza virus NS1A-binding protein homolog2.1e-1841.52Show/hide
Query:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------
        R L+ I EAASSGQ NINPYGWTTDGSERTLYPAQ                                                                 
Subjt:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------

Query:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                        IK QI EEHFDL SQV DAVDVTSSLDA NSA GAH  ANE++ E K R+LHKLQ
Subjt:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

A0A6J1J5H4 influenza virus NS1A-binding protein homolog6.0e-1840.94Show/hide
Query:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------
        R L+ I EAASSGQ NINPYGWTTDGSERTLYPAQ                                                                 
Subjt:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQ-----------------------------------------------------------------

Query:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ
                        IK QI EEHFDL SQV DAVDVTSSLDA NS+ GAH  ANE++ E K R+LHKLQ
Subjt:  ----------------IKPQISEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G11000.1 DCD (Development and Cell Death) domain protein9.8e-0543.9Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQIKPQI
        +R LH I EAAS G+ NI+   W+ +G++ + YPAQ+K ++
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQIKPQI

AT3G11000.2 DCD (Development and Cell Death) domain protein9.8e-0543.9Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQIKPQI
        +R LH I EAAS G+ NI+   W+ +G++ + YPAQ+K ++
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQIKPQI

AT5G01660.1 CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915)2.9e-0967.57Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQI
        +R LH I EAA  GQ N +PYGWT+DGSERT YPAQ+
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAGGATTTAGCCTATTTGACCACAAATTCTTTGTAGGTGCACGAATGTTGTTCTTCGCAGCTGCGAATGTTGCTGAGCAAGTAGAGTTCCCCAAAAATCCGGA
GATAGTTAAATGGACAATGAATAGAAACTTGCATGTTATCCTTGAGGCGGCTAGTTCTGGTCAGACGAATATTAATCCATATGGGTGGACTACTGATGGTTCAGAGAGAA
CACTTTATCCAGCTCAGATCAAACCACAAATTTCGGAGGAGCACTTTGACTTGGCAAGTCAAGTATCAGATGCTGTAGATGTTACTTCCTCATTAGACGCAGAAAACAGT
GCATTTGGTGCTCATTCTGATGCAAATGAGGCCAATGGAGAGGAGAAATACCGAGTATTGCATAAACTACAACTGCCTATAATCATGAAAATCCAGTGTTGCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATAGGATTTAGCCTATTTGACCACAAATTCTTTGTAGGTGCACGAATGTTGTTCTTCGCAGCTGCGAATGTTGCTGAGCAAGTAGAGTTCCCCAAAAATCCGGA
GATAGTTAAATGGACAATGAATAGAAACTTGCATGTTATCCTTGAGGCGGCTAGTTCTGGTCAGACGAATATTAATCCATATGGGTGGACTACTGATGGTTCAGAGAGAA
CACTTTATCCAGCTCAGATCAAACCACAAATTTCGGAGGAGCACTTTGACTTGGCAAGTCAAGTATCAGATGCTGTAGATGTTACTTCCTCATTAGACGCAGAAAACAGT
GCATTTGGTGCTCATTCTGATGCAAATGAGGCCAATGGAGAGGAGAAATACCGAGTATTGCATAAACTACAACTGCCTATAATCATGAAAATCCAGTGTTGCCTTTAA
Protein sequenceShow/hide protein sequence
MDIGFSLFDHKFFVGARMLFFAAANVAEQVEFPKNPEIVKWTMNRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQIKPQISEEHFDLASQVSDAVDVTSSLDAENS
AFGAHSDANEANGEEKYRVLHKLQLPIIMKIQCCL