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CmoCh06G002170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G002170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionselT-like protein
Genome locationCmo_Chr06:1170352..1176204
RNA-Seq ExpressionCmoCh06G002170
SyntenyCmoCh06G002170
Gene Ontology termsGO:0045454 - cell redox homeostasis (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0004791 - thioredoxin-disulfide reductase activity (molecular function)
InterPro domainsIPR019389 - Selenoprotein T


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596340.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3489.53Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSEELQ
        MDRT+IDLLGLPIFLL TDIVN FTP PPKPAN  P RVHYQPK ESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSE LQ
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSEELQ
XP_022935564.1 selT-like protein [Cucurbita moschata]1.1e-3287.65Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
        MDRTQI LLGLPIFLLFTDIVNLFTPPPPKP NH PPRVHYQPKS+ VIQEP++FPTEK+SGIGGIG GSVININF VSCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
XP_022935717.1 selT-like protein [Cucurbita moschata]1.2e-41100Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSEELQ
        MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSEELQ
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSEELQ
XP_022983567.1 selT-like protein [Cucurbita maxima]8.9e-3286.42Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
        MDRTQI LLGLPIFLLFTDIVNLFTPPPPKP NH PPRVHYQPKS+ VIQEP++FPTEK+SGIG IG GSVININF VSCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
XP_023540936.1 selT-like protein [Cucurbita pepo subsp. pepo]4.1e-3796.34Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSS
        MDRTQIDLLGLPIFLL TDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPI+FPTEKQSGIGGIGHGSVININF VSCSS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSS
TrEMBL top hitse value%identityAlignment
A0A5D3DMW2 SelT-like protein3.7e-3186.59Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKP-ANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
        MDRT+I LLGLPIFLLFTDIVNLFTPPPPKP ANH PPRVHYQPKS+SVIQEP++FPTEK+S IGGIG GSVININF VSCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKP-ANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
A0A6J1F5S6 selT-like protein5.1e-3387.65Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
        MDRTQI LLGLPIFLLFTDIVNLFTPPPPKP NH PPRVHYQPKS+ VIQEP++FPTEK+SGIGGIG GSVININF VSCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
A0A6J1F6D5 selT-like protein6.0e-42100Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSEELQ
        MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSEELQ
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSEELQ
A0A6J1IZR1 selT-like protein4.3e-3286.42Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
        MDRTQI LLGLPIFLLFTDIVNLFTPPPPKP NH PPRVHYQPKS+ VIQEP++FPTEK+SGIG IG GSVININF VSCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
E5GBE6 Selenoprotein t3.7e-3186.59Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKP-ANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
        MDRT+I LLGLPIFLLFTDIVNLFTPPPPKP ANH PPRVHYQPKS+SVIQEP++FPTEK+S IGGIG GSVININF VSCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKP-ANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
SwissProt top hitse value%identityAlignment
Q9STZ2 SelT-like protein2.3e-1449.38Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
        MD+TQ+ LLGLPIFLL +D+ NLFTPPPPK  + SPP           I E + FP +K +   G+G+G+ + INF +SCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
Arabidopsis top hitse value%identityAlignment
AT3G47300.1 SELT-like protein precursor1.6e-1549.38Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
        MD+TQ+ LLGLPIFLL +D+ NLFTPPPPK  + SPP           I E + FP +K +   G+G+G+ + INF +SCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCS
AT5G58640.1 Selenoprotein, Rdx type2.9e-2054.12Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKP---ANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGG-IGHGSVININFYVSCS
        MDR Q+ LLGLPIFL  +D+ NLFTPPPPKP     H PP + +Q +  ++I E + FP++K SG+GG IG+G+ + INF VSCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKP---ANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGG-IGHGSVININFYVSCS
AT5G58640.2 Selenoprotein, Rdx type3.5e-1852.94Show/hide
Query:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKP---ANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGG-IGHGSVININFYVSCS
        MDR Q+ LLGLPIFL  +D+ NLFTPPPPKP     H PP + +Q +  ++I E + FP++  SG+GG IG+G+ + INF VSCS
Subjt:  MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKP---ANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGG-IGHGSVININFYVSCS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGAACACAGATAGATCTGTTAGGGCTGCCGATCTTTCTGCTTTTCACTGATATCGTGAATCTTTTTACTCCCCCGCCTCCTAAACCGGCCAATCACTCTCCACC
TCGAGTTCACTATCAGCCTAAATCTGAATCAGTCATCCAGGAACCGATTCAATTTCCTACGGAGAAACAGAGCGGAATCGGAGGAATTGGCCATGGCAGCGTTATCAATA
TCAATTTCTACGTTTCTTGTTCTTCAGAGGAACTGCAATAA
mRNA sequenceShow/hide mRNA sequence
CAATGGGAATCGGACACGGAGTCTTTGATTTAGTCCTATTTTGATTATTGGTCGTAGCACGTGCCGTTGTTGTTGACTTAATGGCATTCCTGTCTGAAGACCCATGCAGA
ATATTGTTTGACCTGCCGACTTTGTTGACTTTCCGTCTTCCTTAATTGGGCCTTTTCTCATTTACATTTTGGGCCTGCGAAAACTTGGGCTACCAAATAAATTGTTAGAG
GCTTCGGCCCATTTGGCCCATCTATATGACTCGTGAACGTGCAGTTGGACGGGGTATAAATAACGCGGCAAAATAATTACACGAGGACAATTGTAGCCTTCAATTGGCGT
CATATTTTCGTTTGTAAATTTTCCTTTTTCCCCCAAATCCTTCTCGTGGAAGTGAGTATCTGGTTCTCGAGAGCTTTGCATTGTTGACTCCGATGGATCGAACACAGATA
GATCTGTTAGGGCTGCCGATCTTTCTGCTTTTCACTGATATCGTGAATCTTTTTACTCCCCCGCCTCCTAAACCGGCCAATCACTCTCCACCTCGAGTTCACTATCAGCC
TAAATCTGAATCAGTCATCCAGGAACCGATTCAATTTCCTACGGAGAAACAGAGCGGAATCGGAGGAATTGGCCATGGCAGCGTTATCAATATCAATTTCTACGTTTCTT
GTTCTTCAGAGGAACTGCAATAACGATGAAAAATATGCTGGAGTAATCATTTCCTGGACTTGAAGTTATTTTGGCGAATTATCCCCCACCCATCCCAAAGCGTCCTCTCA
GTAAAGTAGTACCCGTCGTTCAATTTGGAATCGTTGCAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGT
GCTAATAGGTTTGGAAGCATCGCAAGCACGTGGCTGTTTGCAAATTTTATCCGGTCGTTCTTGTTAGACGAACACGACTCTCCACAATAGTATGATATTGTCCCCTTTGA
GTATAAGCTCTCGTGGCTTTGCTTTGGGCTTTCCCAAAATGCCTCATATCAATGAAGACAGTATTCTTTGATTAAAAACCCATGATCATTTTCTAAATTAGCCGATGTGG
GACTTTCATCATCCAACAATTCTTACAGAGTTCTGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTCTTTTCGAAGTTGAAGGAGCAGTGATTTCCTAGTGAGATCG
AGTTGAGAGATGTTATTGGTAGGAAACTTTCTGGGTCGAGATTTGTCGACAACTCGGGAGGATTTTGGTCATAGCCAAGCAGGAGCATGTGGGAGAGATAGATCCAGTTT
CAATATGCCTATCCTAAACATAATCCCTGGCTAGCGAAACAGTTTGAAGCCTGCTGCGCTACCCAAAGTAAGCCGCCGATAACCTTTTTGGCTGCCTATCAACAGCATCC
TTCTGCAACCCGTAAGCTCTGATTCTAAGATGAAGCTGAGCCACGGCGGCCAAAAATCTTACGGTTTGCGCTGGCGTAAGAATCTCCGCCACTTTCAACGCCGTTTCTCT
TCTAAAAAAATCAGCACTCGCCAGCACCGACTGAAACGCCGCTTTCAACGCCTCCATTTCGGTCCCACCAGTAACGCCGTCGTGGCCCTGCCTCCGGAAAAACTCCAGCA
ACGGCGGCGCCGCCACTTTTTCTTGAATCTTCGCTAAGTCATTGTTTAGCATCCGCTCTTCGACCTTCACGTCTTCCCTCAGCCGCCCAATTCTCAACACTTGATCGTCC
CACAAGTCGTTTATGGACTCGTTGACGAGCCGGAAAATCAGGCCCGGCCGGAATCCGCCGATCCACAACAGACTCTGCTCGTAGGTGGTGAACCAAGTGGGGGAAAAAAC
GAGAAAAATATCCCTTTGGGCAATTCTAGATTTTTTCTCGTAATATTCCTCGTAGTGGCTGAGGGTTCGAGAAATTAAATCATCGAGATCGCCGTTGTCCGCAGCGTCGT
CGGGATGGCGGCGCGTGGCTGTCAGAAGCTCGTCGAGATATTGTTGTTGGCGGAGAAGCCAGCCTTCAAAAAATGCTGTGAATGAGTCAACATTGTAATCGTCCCCTGGC
ATTTACAGAGAAATACAGAGAGACAAAAGGAGGTGTGGCGAACTCAAGGCTGATTCAAGAGAGACAGAAACAGAGAATTTTATGGGATTTTTTTTTTTTTTCTTTTTGTT
TTTTTTTTGGGTGTCAAGATTTTGAGATTTATGTCTCTATATGTTACAGTTATGAAAGGAAACTTTGGGAGAACACTTTGCTTA
Protein sequenceShow/hide protein sequence
MDRTQIDLLGLPIFLLFTDIVNLFTPPPPKPANHSPPRVHYQPKSESVIQEPIQFPTEKQSGIGGIGHGSVININFYVSCSSEELQ