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CmoCh06G002540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G002540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionimmediate early response 3-interacting protein 1-like
Genome locationCmo_Chr06:1303381..1305297
RNA-Seq ExpressionCmoCh06G002540
SyntenyCmoCh06G002540
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0030134 - COPII-coated ER to Golgi transport vesicle (cellular component)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR013880 - Yos1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137742.1 protein transport protein yos1-like [Cucumis sativus]3.0e-1273.08Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
        M FWTF +G+LLFANAFAILNEDRFLARRGWTLA+M RE R++LK Q + L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
XP_008442479.1 PREDICTED: protein transport protein yos1-like [Cucumis melo]6.6e-1273.08Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
        M FWTF +G+LLF NAFAILNEDRFLARRGWTLA+M RE R++LK Q V L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
XP_022935803.1 immediate early response 3-interacting protein 1-like [Cucurbita moschata]1.0e-1792.31Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
        MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQ + L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
XP_022971339.1 immediate early response 3-interacting protein 1-like [Cucurbita maxima]4.0e-1790.38Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
        MLFW FLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQ + L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
XP_038906232.1 protein transport protein yos1-like [Benincasa hispida]1.1e-1154.95Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALLSTYSLRCRRRRRCFFVPISWFSLAYKLFMLLLLCILLFA
        M FWTFLEGLLLFANAFAILNEDRFLARRGWTLA+M RE RN+LK Q + L+            C F+      L   LF ++++ I LF+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALLSTYSLRCRRRRRCFFVPISWFSLAYKLFMLLLLCILLFA
TrEMBL top hitse value%identityAlignment
A0A1S3B5S0 protein transport protein yos1-like3.2e-1273.08Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
        M FWTF +G+LLF NAFAILNEDRFLARRGWTLA+M RE R++LK Q V L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
A0A2N9J2D1 Uncharacterized protein5.4e-1275Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
        M FWT LE LLLFANA AILNEDRFLARRGWTLA++ R GRNSLK Q + L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
A0A6J1FBJ2 immediate early response 3-interacting protein 1-like5.1e-1892.31Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
        MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQ + L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
A0A6J1I8A0 immediate early response 3-interacting protein 1-like1.9e-1790.38Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
        MLFW FLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQ + L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
A0A7J7DWZ0 Immediate early response 3-interacting protein 1-like isoform X27.1e-1275Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
        M FWT LEGLLLFANA AILNEDRFLARRGWTLA++P   RNSLK Q + L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37975.1 Yos1-like protein1.1e-1251.81Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREG-RNSLKAQPVALLSTYSLRCRRRRRCFFVPISWFSLAYKLFML
        M FWT +EGLLLFANA AILNEDRFLA +GWTLA++ + G RNSLK Q + L+      C   R    +P+  F+L   +F L
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREG-RNSLKAQPVALLSTYSLRCRRRRRCFFVPISWFSLAYKLFML
AT3G54085.1 Yos1-like protein7.8e-1162.26Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPR-EGRNSLKAQPVALL
        M FWT L+GLLLFANA AILNEDRFL  RGWTL ++ + + RNS K Q + L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPR-EGRNSLKAQPVALL
AT3G54085.2 Yos1-like protein7.8e-1162.26Show/hide
Query:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPR-EGRNSLKAQPVALL
        M FWT L+GLLLFANA AILNEDRFL  RGWTL ++ + + RNS K Q + L+
Subjt:  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPR-EGRNSLKAQPVALL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATTCTGGACTTTTTTGGAAGGGCTTCTGCTGTTCGCAAACGCCTTCGCAATTCTAAACGAGGATCGATTCCTTGCTCGGAGAGGATGGACGTTGGCGGATATGCC
GAGAGAAGGAAGAAACTCGCTCAAAGCGCAGCCCGTCGCCCTTCTCTCTACATACTCGCTTCGTTGTCGGCGGCGGCGGCGTTGTTTTTTTGTTCCGATTAGCTGGTTCT
CTCTTGCTTATAAGTTATTTATGCTTCTCCTACTCTGTATTTTACTTTTCGCTTCGCCGTTAATCTTATCTTGTCCGGCAGCATTGATGATGAAACACTCTTATTGTTAT
CCTTGCACTTTGATTTATCGTGAAGAAACTCATGGGGAATAG
mRNA sequenceShow/hide mRNA sequence
GGGAAAATTGAAGATGTGGAAGAGAAAAGGTTGCAGGAAGAAGCTGAAATGAAGCCATGGATGCTTCAATTTTAGGGTTTATCCATACTTTTATCTTCAAACCCAAAACC
CCAAGACGAAGTTACTGCCGAGTTGGCTGTCTTTTTCTCGTTAAATATAATAGAAAACTGTCGAAGCGATCATCCGACGGCTATAATTTCACTTGTTCATCTCATAATCT
CAGTCAACCGCTCGATTAAAGCGATCATCGCCTCCAATTCCATTCTATTCTCAAGACCTGAAACAAACACCAATCGCTTGCTCAGAAAATCGTCGAACGAAAGGTGAGAA
AAACAAGAAGCTCTATTCGATCATCTTCAGTTTCGATTTCATTTCTGGATTCCAAATCCGTAAAGATTCAAAGTCTTCACCGTTTTCGAACACGCAGATATGCTATTCTG
GACTTTTTTGGAAGGGCTTCTGCTGTTCGCAAACGCCTTCGCAATTCTAAACGAGGATCGATTCCTTGCTCGGAGAGGATGGACGTTGGCGGATATGCCGAGAGAAGGAA
GAAACTCGCTCAAAGCGCAGCCCGTCGCCCTTCTCTCTACATACTCGCTTCGTTGTCGGCGGCGGCGGCGTTGTTTTTTTGTTCCGATTAGCTGGTTCTCTCTTGCTTAT
AAGTTATTTATGCTTCTCCTACTCTGTATTTTACTTTTCGCTTCGCCGTTAATCTTATCTTGTCCGGCAGCATTGATGATGAAACACTCTTATTGTTATCCTTGCACTTT
GATTTATCGTGAAGAAACTCATGGGGAATAG
Protein sequenceShow/hide protein sequence
MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQPVALLSTYSLRCRRRRRCFFVPISWFSLAYKLFMLLLLCILLFASPLILSCPAALMMKHSYCY
PCTLIYREETHGE