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CmoCh06G002550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G002550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLectin_legB domain-containing protein
Genome locationCmo_Chr06:1303625..1304232
RNA-Seq ExpressionCmoCh06G002550
SyntenyCmoCh06G002550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EFH52498.1 hypothetical protein ARALYDRAFT_348499 [Arabidopsis lyrata subsp. lyrata]1.0e-0651.35Show/hide
Query:  MVMMLKRMSGSLKNWQAWMSPITCALSEF-LPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSISAC
        M  +L  M GSL  WQAW+ P+   L EF LP    S +VHPL  R RSS RIA AFA SR P   VQ  I  C
Subjt:  MVMMLKRMSGSLKNWQAWMSPITCALSEF-LPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSISAC

KAF5742451.1 hypothetical protein HS088_TW09G00499 [Tripterygium wilfordii]6.6e-0644.87Show/hide
Query:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSISACSKTVL
        M M+ K + G+L+ W A+M PI+C  ++F+     S  + P  ARNRSSF IA AFA+SR+PS  V   IS   K  L
Subjt:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSISACSKTVL

KAG5054396.1 hypothetical protein JHK85_006906 [Glycine max]1.1e-0574.42Show/hide
Query:  EFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI
        EFL    ISANVHPLRARNRSSF+IA AFA SR PS  VQN I
Subjt:  EFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI

PON37096.1 hypothetical protein PanWU01x14_322920 [Parasponia andersonii]3.1e-1161.43Show/hide
Query:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI
        ++ +LK M G+LKNWQA +SP+ C  S FL     S  VHPL ARN SSFRIA AFANSRSPS+KVQ  I
Subjt:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI

PON90163.1 LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_140130 [Trema orientale]3.1e-1161.43Show/hide
Query:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI
        ++ +LK M G+LKNWQA +SP+ C  S FL     S  VHPL ARN SSFRIAKAFANSR PS+KVQ  I
Subjt:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI

TrEMBL top hitse value%identityAlignment
A0A0D3C4W5 Uncharacterized protein1.5e-0857.97Show/hide
Query:  MVMMLKRMSGSLKNWQAWMSPITCALSEF-LPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQN
        M + LK M GSL  WQAWM P    L EF LP    SA++HPL A+ RSS RIA AFANS +PS  VQN
Subjt:  MVMMLKRMSGSLKNWQAWMSPITCALSEF-LPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQN

A0A2P5AKM3 Uncharacterized protein1.5e-1161.43Show/hide
Query:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI
        ++ +LK M G+LKNWQA +SP+ C  S FL     S  VHPL ARN SSFRIA AFANSRSPS+KVQ  I
Subjt:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI

A0A2P5EXB7 Uncharacterized protein1.5e-1161.43Show/hide
Query:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI
        ++ +LK M G+LKNWQA +SP+ C  S FL     S  VHPL ARN SSFRIAKAFANSR PS+KVQ  I
Subjt:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSI

A0A7J7D808 Uncharacterized protein3.2e-0644.87Show/hide
Query:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSISACSKTVL
        M M+ K + G+L+ W A+M PI+C  ++F+     S  + P  ARNRSSF IA AFA+SR+PS  V   IS   K  L
Subjt:  MVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSISACSKTVL

D7LUQ1 Lectin_legB domain-containing protein4.9e-0751.35Show/hide
Query:  MVMMLKRMSGSLKNWQAWMSPITCALSEF-LPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSISAC
        M  +L  M GSL  WQAW+ P+   L EF LP    S +VHPL  R RSS RIA AFA SR P   VQ  I  C
Subjt:  MVMMLKRMSGSLKNWQAWMSPITCALSEF-LPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSISAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGGTGATGATGTTGAAAAGAATGAGTGGAAGTCTCAAGAACTGGCAAGCATGGATGAGTCCTATTACCTGCGCTTTGAGCGAGTTTCTTCCTTCTCTCGGCAT
ATCCGCCAACGTCCATCCTCTCCGAGCAAGGAATCGATCCTCGTTTAGAATTGCGAAGGCGTTTGCGAACAGCAGAAGCCCTTCCAAAAAAGTCCAGAATAGCATATCTG
CGTGTTCGAAAACGGTCTTGAGAATAGAATGGAATTGGAGGCGATGA
mRNA sequenceShow/hide mRNA sequence
TTTAATCCAAAGATTTTTTCAGAACATGATTGATCTGTAATCTTCAAAGAACACGAACAGGAAGCTAAAATCAAGAGCAAACAAACATATTACCAGTTGACGATCGATTA
CATACAACGAATGAAACTATGAAATGCTTCAACAATACACAATAATTTACAGGAATCTCTGTCACTTTCTATACTGAAATCAGCCAGAGAGAAGCTTAATGATGATGGTG
ATGATGTTGAAAAGAATGAGTGGAAGTCTCAAGAACTGGCAAGCATGGATGAGTCCTATTACCTGCGCTTTGAGCGAGTTTCTTCCTTCTCTCGGCATATCCGCCAACGT
CCATCCTCTCCGAGCAAGGAATCGATCCTCGTTTAGAATTGCGAAGGCGTTTGCGAACAGCAGAAGCCCTTCCAAAAAAGTCCAGAATAGCATATCTGCGTGTTCGAAAA
CGGTCTTGAGAATAGAATGGAATTGGAGGCGATGA
Protein sequenceShow/hide protein sequence
MMMVMMLKRMSGSLKNWQAWMSPITCALSEFLPSLGISANVHPLRARNRSSFRIAKAFANSRSPSKKVQNSISACSKTVLRIEWNWRR