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CmoCh06G002980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G002980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmetallothionein-like protein type 2
Genome locationCmo_Chr06:1485885..1487442
RNA-Seq ExpressionCmoCh06G002980
SyntenyCmoCh06G002980
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000347 - Metallothionein, family 15, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596409.1 Metallothionein-like protein type 2, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3898.7Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCKMFPD+SFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
XP_022934858.1 metallothionein-like protein type 2 B [Cucurbita moschata]9.8e-3897.4Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFE +EMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
XP_022949247.1 metallothionein-like protein type 2 [Cucurbita moschata]1.5e-38100Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
XP_022983596.1 metallothionein-like protein type 2 B [Cucurbita maxima]4.8e-3796.1Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIE FVVGLAPQKMSFE +EMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
XP_038906044.1 metallothionein-like protein type 2 [Benincasa hispida]4.8e-3796.1Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGS CKCG+GCGGCKMFPDMSFSETTATIETFVVG APQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
TrEMBL top hitse value%identityAlignment
A0A1S3B6L7 metallothionein-like protein type 22.6e-3693.51Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCK FPD+SFSETTATIETFVVG APQKMS+EVAEMGAENGCKCGDNCTCDPC CK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
A0A6J1F8X2 metallothionein-like protein type 2 B4.7e-3897.4Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFE +EMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
A0A6J1GBI9 metallothionein-like protein type 27.3e-39100Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
A0A6J1I8Z4 metallothionein-like protein type 27.3e-39100Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
A0A6J1J2S1 metallothionein-like protein type 2 B2.3e-3796.1Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIE FVVGLAPQKMSFE +EMGAENGCKCGDNCTCDPCNCK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK
SwissProt top hitse value%identityAlignment
P30564 Metallothionein-like protein type 21.2e-2771.6Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGA----ENGCKCGDNCTCDPCNCK
        MSCCGGNCGCGS CKCGNGCGGCKM+PDMSFSE T T ET V+G+  +K  FE  EMG     E GCKCGDNCTC+PC CK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGA----ENGCKCGDNCTCDPCNCK
P43390 Metallothionein-like protein type 22.3e-2669.62Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMG--AENGCKCGDNCTCDPCNCK
        MSCCGG CGCGS+C CG+GCGGC M+PD+S+SE T T ET +VG+APQK  FE +EMG  AENGCKCG +C CDPC CK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMG--AENGCKCGDNCTCDPCNCK
P43398 Metallothionein-like protein 21.8e-2673.08Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAEN-GCKCGDNCTCDPCNCK
        MSCCGGNCGCGSACKCGNGCGGCKM  D+S++E+T T ET V+G+   K  FE AEMGAE+ GCKCG NCTCDPC CK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAEN-GCKCGDNCTCDPCNCK
Q39459 Metallothionein-like protein 23.1e-2672.5Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEM--GAEN-GCKCGDNCTCDPCNCK
        MSCCGGNCGCGS+CKCG+GCGGCKM+PDMS++E T T ET V+G+A  K  FE AEM  GAEN GCKCG NCTC+PC CK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEM--GAEN-GCKCGDNCTCDPCNCK
Q40158 Metallothionein-like protein type 2 B1.2e-2767.5Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMG----AENGCKCGDNCTCDPCNC
        MSCCGGNCGCGS+CKCGNGCGGCKM+PDMS++E++ T ET V+G+ P+K SF   EMG    AENGCKCG +C C+PC C
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMG----AENGCKCGDNCTCDPCNC
Arabidopsis top hitse value%identityAlignment
AT3G09390.1 metallothionein 2A5.9e-2565.43Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAP-QKMSFEVA--EMGAEN-GCKCGDNCTCDPCNCK
        MSCCGGNCGCGS CKCGNGCGGCKM+PD+ FS  T T ETFV+G+AP  K  +E +     AEN  CKCG +C CDPC CK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAP-QKMSFEVA--EMGAEN-GCKCGDNCTCDPCNCK
AT5G02380.1 metallothionein 2B1.7e-1958.02Show/hide
Query:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAE----MGAENGCKCGDNCTCDPCNCK
        MSCCGG+CGCGSACKCGNGCGGCK +PD+   E TAT ET V+G+AP   S   A     +   + CKCG +C C+PC CK
Subjt:  MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAE----MGAENGCKCGDNCTCDPCNCK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTGCTGTGGTGGAAACTGTGGATGCGGCTCTGCCTGCAAGTGCGGAAACGGCTGCGGAGGTTGCAAGATGTTCCCTGACATGAGCTTCTCTGAGACAACCGCAAC
CATCGAGACCTTCGTCGTCGGCCTCGCTCCTCAGAAGATGTCCTTCGAGGTTGCAGAGATGGGAGCCGAGAACGGCTGCAAATGCGGTGACAACTGCACCTGCGATCCAT
GCAACTGTAAATGA
mRNA sequenceShow/hide mRNA sequence
TTCGGGACTAAACGCGAGAATTCCTATCCGTTACGATTTTGACACGTGGACGGTGGTTATGGTACGCTCTTCTTTCCCCGCCCCTATATATAGACTCATCCGTCACCTCT
ACATCTCGTTCAATAACGAGAAGTTTTAGTTTGATTTCGAAAACAAGTTTCATTATCTCGTTGTTCTTAGTTCTTCATCGTCGAAAATGTCGTGCTGTGGTGGAAACTGT
GGATGCGGCTCTGCCTGCAAGTGCGGAAACGGCTGCGGAGGTTGCAAGATGTTCCCTGACATGAGCTTCTCTGAGACAACCGCAACCATCGAGACCTTCGTCGTCGGCCT
CGCTCCTCAGAAGATGTCCTTCGAGGTTGCAGAGATGGGAGCCGAGAACGGCTGCAAATGCGGTGACAACTGCACCTGCGATCCATGCAACTGTAAATGAGCAATTGCTC
AAATCCTTGCGACCTGAGATGTCTTCGAGTACTTAAGTATGATCATAATAACAATTATCAAATCTTCCAGTGTTTTCCTTCCGTCGTTGCGTCTTTAAGAGTCGATTGAA
GTGTTCCTTTCAAATAATAGCAGTTGTTAAGTTGTGGAAAAACTGATATGCTGTTATGGCGCACGGATCTTGTTATCCATAGATGCCTGTGTTTATCCATGTCTGTTTAA
CGTTTGCTTTTCTCTGTGTAAAGAAGCGGTATGTGCTAATTTATGTGTAACAGAGTTTGTTCTTGTTATCCATATCTATTGTTGAAAATCCAGAACCGAGTTTGAGTGCT
CTAAAGGATCTGACTATGAAAAGTAAAATTCAACAATTTCGATGGGGCCGGTCGAATAGCTAACACCTTTCATTCTCAATCGATGTCCAAAATTAAATGCATACTTACGC
GTGCCAGTTATCTTTCGCGACTGATAAGCCGAACAATCTGAGTTTACATGGTAAACAGTTCTGAAAATTGAATACATCCCCGTTCTCCATCCTTTAATTTATTTATTTTA
AGGATGGTAAGTTGTTTTTTCTTTTTGCATCTTTTCTGGAAATCCTCCTTATCCTTTCATCCCTAAGTCGGCGAGTTTAAATTTTATTTTTTCTGTATTCTGTTGTTTGA
GTTTATATTACAGATATTTTCAATAATAGTCAAATGATCTCTCT
Protein sequenceShow/hide protein sequence
MSCCGGNCGCGSACKCGNGCGGCKMFPDMSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK