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CmoCh06G002990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G002990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:1488849..1493569
RNA-Seq ExpressionCmoCh06G002990
SyntenyCmoCh06G002990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017299.1 hypothetical protein SDJN02_19162 [Cucurbita argyrosperma subsp. argyrosperma]4.6e-0768.09Show/hide
Query:  PNDYSPIRPASQTNSLFSNDQVAPVL-FGPVAEEKIRRSDGELVQDG
        PNDYSP+RP S TNSLFS+DQVAPV  F P   E+ RRS GEL +DG
Subjt:  PNDYSPIRPASQTNSLFSNDQVAPVL-FGPVAEEKIRRSDGELVQDG

XP_022971574.1 uncharacterized protein LOC111470251 isoform X1 [Cucurbita maxima]3.5e-1579.63Show/hide
Query:  EKIRRSDGELVQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQLTHMNRTE
        ++ RRSDGE VQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQ++ ++  E
Subjt:  EKIRRSDGELVQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQLTHMNRTE

XP_022971577.1 uncharacterized protein LOC111470251 isoform X2 [Cucurbita maxima]4.3e-1377.78Show/hide
Query:  EKIRRSDGELVQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQLTHMNRTE
        ++ RRSDGE VQD DLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQ++ ++  E
Subjt:  EKIRRSDGELVQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQLTHMNRTE

XP_038904630.1 uncharacterized protein LOC120090965 isoform X1 [Benincasa hispida]9.3e-0870.45Show/hide
Query:  PNDYSPIRPASQTNSLFSNDQVAPVLFGPVAEEKIRRSDGELVQ
        PNDYSPIRP S+TN+LFS++QVAPV F    +E+ RRSDGELVQ
Subjt:  PNDYSPIRPASQTNSLFSNDQVAPVLFGPVAEEKIRRSDGELVQ

XP_038904631.1 uncharacterized protein LOC120090965 isoform X2 [Benincasa hispida]9.3e-0870.45Show/hide
Query:  PNDYSPIRPASQTNSLFSNDQVAPVLFGPVAEEKIRRSDGELVQ
        PNDYSPIRP S+TN+LFS++QVAPV F    +E+ RRSDGELVQ
Subjt:  PNDYSPIRPASQTNSLFSNDQVAPVLFGPVAEEKIRRSDGELVQ

TrEMBL top hitse value%identityAlignment
A0A6J1CUV3 uncharacterized protein LOC111014995 isoform X22.2e-0760.78Show/hide
Query:  QIARPIVH-PNDYSPIRPASQTNSLFSNDQVAPVLFGPVAEEKIRRSDGEL
        +I  P ++ PND+SPIRP S TNSLF+ DQVAP+ F PV EE  R+S+GEL
Subjt:  QIARPIVH-PNDYSPIRPASQTNSLFSNDQVAPVLFGPVAEEKIRRSDGEL

A0A6J1CVN1 uncharacterized protein LOC111014995 isoform X12.2e-0760.78Show/hide
Query:  QIARPIVH-PNDYSPIRPASQTNSLFSNDQVAPVLFGPVAEEKIRRSDGEL
        +I  P ++ PND+SPIRP S TNSLF+ DQVAP+ F PV EE  R+S+GEL
Subjt:  QIARPIVH-PNDYSPIRPASQTNSLFSNDQVAPVLFGPVAEEKIRRSDGEL

A0A6J1I2C4 uncharacterized protein LOC111470251 isoform X22.1e-1377.78Show/hide
Query:  EKIRRSDGELVQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQLTHMNRTE
        ++ RRSDGE VQD DLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQ++ ++  E
Subjt:  EKIRRSDGELVQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQLTHMNRTE

A0A6J1I8Y9 uncharacterized protein LOC111470251 isoform X11.7e-1579.63Show/hide
Query:  EKIRRSDGELVQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQLTHMNRTE
        ++ RRSDGE VQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQ++ ++  E
Subjt:  EKIRRSDGELVQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQLTHMNRTE

A0A6J1J7U0 uncharacterized protein At3g17950-like2.2e-0768.09Show/hide
Query:  PNDYSPIRPASQTNSLFSNDQVAPVL-FGPVAEEKIRRSDGELVQDG
        PNDYSP+RP S TNSLFS+DQVAPV  F P   E+ RRS GEL +DG
Subjt:  PNDYSPIRPASQTNSLFSNDQVAPVL-FGPVAEEKIRRSDGELVQDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCGTCGTTTGAAAGCCATGTGATGCAAATTGCAAGACCGATCGTACATCCCAACGACTACTCGCCTATTCGTCCTGCTTCTCAAACAAACTCTTTGTTTTC
CAATGATCAAGTAGCTCCAGTGTTGTTTGGACCGGTTGCCGAAGAGAAAATCAGAAGATCAGATGGAGAACTTGTCCAGGATGGAGATTTACTTATCATTATCATCATTC
AGCGATCGTGTTTGGGGCAGACAAATCGAGGCATTCGTCGTTGCTGCAACATTCAGTCTGTTTACTGCCAACTTACCCATATGAATCGTACTGAAATCTGTCAGCTCCCC
AAGCCAGCAATTCTCGAACACATTCCAAGGAACCACCACGAGCAGCTAAATGGAGTGGCGAACTACCTGGACAACTGCATAACATATTCACAACAATCCATCATTCTCTG
GATATACTCAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCGTCGTTTGAAAGCCATGTGATGCAAATTGCAAGACCGATCGTACATCCCAACGACTACTCGCCTATTCGTCCTGCTTCTCAAACAAACTCTTTGTTTTC
CAATGATCAAGTAGCTCCAGTGTTGTTTGGACCGGTTGCCGAAGAGAAAATCAGAAGATCAGATGGAGAACTTGTCCAGGATGGAGATTTACTTATCATTATCATCATTC
AGCGATCGTGTTTGGGGCAGACAAATCGAGGCATTCGTCGTTGCTGCAACATTCAGTCTGTTTACTGCCAACTTACCCATATGAATCGTACTGAAATCTGTCAGCTCCCC
AAGCCAGCAATTCTCGAACACATTCCAAGGAACCACCACGAGCAGCTAAATGGAGTGGCGAACTACCTGGACAACTGCATAACATATTCACAACAATCCATCATTCTCTG
GATATACTCAGAATGAACGAATGAAAGATCATTCCTCATACCTGCAAGTGGAGACACAGACAAGAGCACCATTGCTAAGAAGGATACGGACACACTCAGGTTGGCTCTGC
CTGGCGGATAAATGCAATGGAGTTGAGCCATCCCCATCCCTAATGTTCACAAATCTTGCAAACCCCCTAGCCATTTCCATTCAATTCAAATTCAAAACCCATCATATTAA
GCCAATACTCGAAGGTAAATGCTTGAAGAAGAAGAGTAAATTGACTAACCAAGAGTCGGATACAGGGGTGGTATGCGCAGCAGAGAGAATCGCTTGCAGGCAATCAGAAT
GCCC
Protein sequenceShow/hide protein sequence
MAMASFESHVMQIARPIVHPNDYSPIRPASQTNSLFSNDQVAPVLFGPVAEEKIRRSDGELVQDGDLLIIIIIQRSCLGQTNRGIRRCCNIQSVYCQLTHMNRTEICQLP
KPAILEHIPRNHHEQLNGVANYLDNCITYSQQSIILWIYSE