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CmoCh06G003130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G003130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:1532026..1532259
RNA-Seq ExpressionCmoCh06G003130
SyntenyCmoCh06G003130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044076.1 hypothetical protein E6C27_scaffold236G004240 [Cucumis melo var. makuwa]1.9e-1772.15Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPP--TGPPMPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
        MSQR GRHQRRPSQGVFM ADYLSEPPPP   GP   VES  P S+ L+RPP QSR ADP A RPPAPA +N+A NPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPP--TGPPMPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
KAG6580559.1 hypothetical protein SDJN03_20561, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1770.13Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPMPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
        MSQR GRHQRRPSQ VF+ ADYLSEPP  TGP   VE   P S+ L RPP QSR ADP A RPPAPA SNEAPNP +
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPMPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
KAG6596419.1 hypothetical protein SDJN03_09599, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3298.7Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPMPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
        MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPP+PVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPMPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
KGN58888.1 hypothetical protein Csa_002334 [Cucumis sativus]1.8e-1570Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPMPVESVDPQSS-FLSRPPPQSRYADPPAARPPAP--AVSNEAPNPAS
        MSQR  RHQRRPSQGVFM ADYLS+PPPP GP   VES  P SS  L+RP  QSR ADP AARPPAP    +N+APNPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPMPVESVDPQSS-FLSRPPPQSRYADPPAARPPAP--AVSNEAPNPAS
TrEMBL top hitse value%identityAlignment
A0A0A0LAM0 Uncharacterized protein8.7e-1670Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPMPVESVDPQSS-FLSRPPPQSRYADPPAARPPAP--AVSNEAPNPAS
        MSQR  RHQRRPSQGVFM ADYLS+PPPP GP   VES  P SS  L+RP  QSR ADP AARPPAP    +N+APNPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPMPVESVDPQSS-FLSRPPPQSRYADPPAARPPAP--AVSNEAPNPAS
A0A5A7TPQ1 Uncharacterized protein9.3e-1872.15Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPP--TGPPMPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
        MSQR GRHQRRPSQGVFM ADYLSEPPPP   GP   VES  P S+ L+RPP QSR ADP A RPPAPA +N+A NPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPP--TGPPMPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCAGCGATCGGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTCATGACCGCCGATTACCTTTCCGAACCACCTCCGCCGACCGGACCGCCCATGCCGGTTGA
ATCTGTCGATCCACAATCGAGTTTCCTGTCTCGGCCGCCGCCGCAGAGCCGCTACGCTGATCCGCCGGCAGCAAGGCCTCCTGCTCCAGCGGTGTCGAATGAAGCTCCAA
ATCCGGCAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCAGCGATCGGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTCATGACCGCCGATTACCTTTCCGAACCACCTCCGCCGACCGGACCGCCCATGCCGGTTGA
ATCTGTCGATCCACAATCGAGTTTCCTGTCTCGGCCGCCGCCGCAGAGCCGCTACGCTGATCCGCCGGCAGCAAGGCCTCCTGCTCCAGCGGTGTCGAATGAAGCTCCAA
ATCCGGCAAGCTAG
Protein sequenceShow/hide protein sequence
MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPMPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS