; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G003330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G003330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSuppressor protein SRP40-like isoform X2
Genome locationCmo_Chr06:1619823..1621946
RNA-Seq ExpressionCmoCh06G003330
SyntenyCmoCh06G003330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596439.1 hypothetical protein SDJN03_09619, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5364.62Show/hide
Query:  MSANLTGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDE
        M    +GNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKR                                                      
Subjt:  MSANLTGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDE

Query:  PKTLTAATPSVKFLIQTKRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARERIQRSMK
                        TKRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARERIQRSMK
Subjt:  PKTLTAATPSVKFLIQTKRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARERIQRSMK

Query:  ICELNMMKVSPV
        ICELNMMKVSPV
Subjt:  ICELNMMKVSPV

KAG7027980.1 hypothetical protein SDJN02_09159, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-7577.78Show/hide
Query:  MSANLTGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDE
        M    +GNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLL KKLESLNLSFTMLNSEPSISSEICDEDE
Subjt:  MSANLTGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDE

Query:  PKTLTAATPSVKFLIQTKRIQMLE-------------ALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLND
        PKTLTAAT      I ++ I  +              +  +  S+I     +KEKIENSGD FNSVDDSLALVAVNSPEE ETGEM LVI ERVIEVLND
Subjt:  PKTLTAATPSVKFLIQTKRIQMLE-------------ALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLND

Query:  LKQARERIQRSMKICELNMMKVSPV
        LKQARERIQRSMKICELNMMKVSPV
Subjt:  LKQARERIQRSMKICELNMMKVSPV

XP_023005738.1 uncharacterized protein LOC111498645 [Cucurbita maxima]1.2e-7479.36Show/hide
Query:  TGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLT
        +GNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+ITEQNQMRTKAEKKLQLLKKKLESL+LSFTMLNSEPSISSEICDEDEPKTLT
Subjt:  TGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLT

Query:  AATPSVKFLIQT-----------KRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARER
        AAT S+    QT              +   +  +  S+I     +KEKIENSG+EFNSVDDSLA VAVNSPEE ETGEM LVI ERVIEVLNDLKQARER
Subjt:  AATPSVKFLIQT-----------KRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARER

Query:  IQRSMKICELNMMKVSPV
        IQRSMKICELNMMKVSPV
Subjt:  IQRSMKICELNMMKVSPV

XP_023538931.1 uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo]5.0e-7679.28Show/hide
Query:  MSANLTGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDE
        M    +GNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICD+DE
Subjt:  MSANLTGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDE

Query:  PKTLTAAT--PSVKFLI--------QTKRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQ
        PKTLT AT  PS    I        +    +   +  +  S+I     +KEKIENSGDEFNSV+DSLALVAVNSPEEAETGEM LVI ERVIEVLNDLKQ
Subjt:  PKTLTAAT--PSVKFLI--------QTKRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQ

Query:  ARERIQRSMKICELNMMKVSPV
        ARERIQRSMKICELNMMKVSPV
Subjt:  ARERIQRSMKICELNMMKVSPV

XP_038906280.1 uncharacterized protein LOC120092141 [Benincasa hispida]3.4e-5665.61Show/hide
Query:  TGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLT
        +GN MEG EV KTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQIT+Q QM+TKAEKKLQLLKKKL SLNLS TM+NSE S+SSEICDEDEPKTL 
Subjt:  TGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLT

Query:  AATPSVKFLIQTKRIQMLEALP-------------ARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETG-EMMLVIGERVIEVLNDLKQA
           PS+  L  +K I  +  L              +  S+I    P+K KI     EF+SVDDSLA+VAVNSP ++ETG E+  +I ER+IEVLNDLK A
Subjt:  AATPSVKFLIQTKRIQMLEALP-------------ARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETG-EMMLVIGERVIEVLNDLKQA

Query:  RERIQRSMKICELNMMKVSPV
        RE I+ SMKICE+NM++VSPV
Subjt:  RERIQRSMKICELNMMKVSPV

TrEMBL top hitse value%identityAlignment
A0A0A0LDB5 Uncharacterized protein1.5e-4959.38Show/hide
Query:  MSANLTGNTM-EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDED
        M    +GN M EG EV KTMECLRRRLLAER ASLLAK+EAELM KRS+ELEKQIT+Q QM+ +AEKKLQLLKKKLESLNLS TM+NSE S+SSEIC+E+
Subjt:  MSANLTGNTM-EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDED

Query:  EPKTLTAATP--------SVKFLIQTKRIQMLEALPARV--SQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMML-VIGERVIEVLNDL
        EPKT     P        S  F  + +      +  + +  S+I    P+K KI N G E +SVDDSLA+VAV+SP ++ET E +  VI ER+IEVLNDL
Subjt:  EPKTLTAATP--------SVKFLIQTKRIQMLEALPARV--SQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMML-VIGERVIEVLNDL

Query:  KQARERIQRSMKICELNMMKVSPV
        K+ARERIQ SMK+C+ +M++VSP+
Subjt:  KQARERIQRSMKICELNMMKVSPV

A0A1S3B6U8 uncharacterized protein LOC1034864264.2e-5262.05Show/hide
Query:  MSANLTGNTM-EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDED
        M    +GN M EG EV KTMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQIT+Q QM+ +AEKKLQLLKKKLESLNLS TM+NSE SISSEIC+ED
Subjt:  MSANLTGNTM-EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDED

Query:  EPKTLTAATPSVKFLIQTKRIQMLE----------ALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMML-VIGERVIEVLNDL
        EPKTL    P  +       I   E          A     S+I    P+K K  + G EF+SVDDSLA+VAV+SPE++ETGE +  VI ER+IEVLNDL
Subjt:  EPKTLTAATPSVKFLIQTKRIQMLE----------ALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMML-VIGERVIEVLNDL

Query:  KQARERIQRSMKICELNMMKVSPV
        K+AR RIQ SM+ICE +M++VSPV
Subjt:  KQARERIQRSMKICELNMMKVSPV

A0A5A7TKN7 Suppressor protein SRP40-like isoform X22.1e-5163.08Show/hide
Query:  MEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATP
        +EG EV KTMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQIT+Q QM+ +AEKKLQLLKKKLESLNLS TM+NSE SISSEIC+EDEPKTL    P
Subjt:  MEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATP

Query:  SVKFLIQTKRIQMLE----------ALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMML-VIGERVIEVLNDLKQARERIQRS
          +       I   E          A     S+I    P+K K  + G EF+SVDDSLA+VAV+SPE++ETGE +  VI ER+IEVLNDLK+AR RIQ S
Subjt:  SVKFLIQTKRIQMLE----------ALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMML-VIGERVIEVLNDLKQARERIQRS

Query:  MKICELNMMKVSPV
        M+ICE +M++VSPV
Subjt:  MKICELNMMKVSPV

A0A6J1CXG5 uncharacterized protein LOC1110150991.1e-5263.13Show/hide
Query:  TGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLT
        +GN MEG EVLKTMECLRRRLLAERQAS LAKE+AELM KRS ELEKQITEQ  MRTKAEKKL+LL+KKLESLNL  T + SEPS+SSEICD ++PKTL 
Subjt:  TGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLT

Query:  AATPSVKFLIQTKRIQMLE----------ALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARERI
         A+        T  I   E          A  +  S+I     +K KIEN GDEF S  DS A+VAVNSPE ++TGE    I E +IEVLNDLK ARERI
Subjt:  AATPSVKFLIQTKRIQMLE----------ALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARERI

Query:  QRSMKICELNMMKVSPV
        Q SM+I ELNM+KVSPV
Subjt:  QRSMKICELNMMKVSPV

A0A6J1L305 uncharacterized protein LOC1114986456.0e-7579.36Show/hide
Query:  TGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLT
        +GNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+ITEQNQMRTKAEKKLQLLKKKLESL+LSFTMLNSEPSISSEICDEDEPKTLT
Subjt:  TGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLT

Query:  AATPSVKFLIQT-----------KRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARER
        AAT S+    QT              +   +  +  S+I     +KEKIENSG+EFNSVDDSLA VAVNSPEE ETGEM LVI ERVIEVLNDLKQARER
Subjt:  AATPSVKFLIQT-----------KRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARER

Query:  IQRSMKICELNMMKVSPV
        IQRSMKICELNMMKVSPV
Subjt:  IQRSMKICELNMMKVSPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37300.1 unknown protein1.0e-1052.94Show/hide
Query:  EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEI
        E  E  +T+ECLR RLLAERQ S  AKEEAEL+ ++  ELE+ + E+ ++R KAEK+L+LL KKLE +  S    +SE S SSE+
Subjt:  EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEI

AT2G37300.2 unknown protein1.0e-1052.94Show/hide
Query:  EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEI
        E  E  +T+ECLR RLLAERQ S  AKEEAEL+ ++  ELE+ + E+ ++R KAEK+L+LL KKLE +  S    +SE S SSE+
Subjt:  EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGAACCTTACTGGGAACACAATGGAAGGTAGTGAAGTTCTGAAAACAATGGAGTGCCTGAGAAGAAGATTACTGGCAGAGAGGCAAGCATCATTACTTGCCAA
AGAGGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAGTTAGAGAAGCAAATCACAGAGCAAAATCAAATGAGAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAA
AGCTCGAATCACTTAACCTTTCTTTCACGATGTTGAACTCAGAACCGTCAATTTCGTCGGAAATTTGCGATGAAGATGAACCGAAAACCCTAACCGCAGCAACACCATCG
GTGAAATTTCTCATTCAGACGAAGAGAATCCAAATGCTCGAGGCTCTACCAGCTCGAGTTTCTCAGATTCAGAAATTTGCTCCAACGAAAGAAAAGATCGAAAATAGTGG
AGATGAATTCAATTCCGTGGACGATTCACTCGCACTTGTGGCCGTGAACTCTCCGGAAGAAGCAGAAACCGGCGAGATGATGCTGGTGATCGGTGAACGGGTAATTGAAG
TTCTTAATGATCTGAAGCAGGCCAGAGAGAGAATTCAGCGCTCAATGAAGATCTGTGAACTTAACATGATGAAAGTTAGCCCAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGAACCTTACTGGGAACACAATGGAAGGTAGTGAAGTTCTGAAAACAATGGAGTGCCTGAGAAGAAGATTACTGGCAGAGAGGCAAGCATCATTACTTGCCAA
AGAGGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAGTTAGAGAAGCAAATCACAGAGCAAAATCAAATGAGAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAA
AGCTCGAATCACTTAACCTTTCTTTCACGATGTTGAACTCAGAACCGTCAATTTCGTCGGAAATTTGCGATGAAGATGAACCGAAAACCCTAACCGCAGCAACACCATCG
GTGAAATTTCTCATTCAGACGAAGAGAATCCAAATGCTCGAGGCTCTACCAGCTCGAGTTTCTCAGATTCAGAAATTTGCTCCAACGAAAGAAAAGATCGAAAATAGTGG
AGATGAATTCAATTCCGTGGACGATTCACTCGCACTTGTGGCCGTGAACTCTCCGGAAGAAGCAGAAACCGGCGAGATGATGCTGGTGATCGGTGAACGGGTAATTGAAG
TTCTTAATGATCTGAAGCAGGCCAGAGAGAGAATTCAGCGCTCAATGAAGATCTGTGAACTTAACATGATGAAAGTTAGCCCAGTTTGA
Protein sequenceShow/hide protein sequence
MSANLTGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATPS
VKFLIQTKRIQMLEALPARVSQIQKFAPTKEKIENSGDEFNSVDDSLALVAVNSPEEAETGEMMLVIGERVIEVLNDLKQARERIQRSMKICELNMMKVSPV