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CmoCh06G003910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G003910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTranslation initiation factor IF-2 like
Genome locationCmo_Chr06:1909764..1912335
RNA-Seq ExpressionCmoCh06G003910
SyntenyCmoCh06G003910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596489.1 hypothetical protein SDJN03_09669, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3797.62Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVL+HLIMGKIYRIFGWEY KPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
XP_008442719.1 PREDICTED: uncharacterized protein LOC103486509 [Cucumis melo]1.0e-3289.29Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVLF+LIMGKIY +FGWEYRKPQ VPPACPYRPAAKQNSN EL+PLAGQQHPPPK VDA D KQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
XP_023005210.1 uncharacterized protein LOC111498307 [Cucurbita maxima]6.5e-3595.24Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEY KPQRVPPACPYRPAAKQN NEEL+PLAGQQHPPPKAVDA DAKQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
XP_023538875.1 uncharacterized protein LOC111799671 [Cucurbita pepo subsp. pepo]1.2e-3696.43Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQ VPPACPYRPAAKQNSNEEL+PLAGQQHPPPKAVDA DAKQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
XP_038903023.1 uncharacterized protein LOC120089725 [Benincasa hispida]2.5e-3491.67Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVLF+LIMGKIY IFGWEYRKPQRVPPACPYRPAAKQNSN +L+PLAGQQHPPPKAVDA D KQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
TrEMBL top hitse value%identityAlignment
A0A0A0LB44 Uncharacterized protein5.0e-3389.29Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVLF+LIMGKIY +FGWEYRKPQ VPPACPYRPAAKQNSN EL+PLAGQQHPPPK VDA D KQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
A0A1S3B744 uncharacterized protein LOC1034865095.0e-3389.29Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVLF+LIMGKIY +FGWEYRKPQ VPPACPYRPAAKQNSN EL+PLAGQQHPPPK VDA D KQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
A0A6J1CU80 uncharacterized protein LOC1110143859.4e-3285.71Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVLF+LIMGKIY +FGWEYRKP+RVPPACPYRPAAKQN N EL+P AGQQHP PKAVDA D K+D
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
A0A6J1F5U6 uncharacterized protein LOC111442415 isoform X15.5e-3289.29Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVLF LIMGKIY IFGWEYRKPQRVPPACPYRPAAKQNSN EL+P AGQQ PPPK VDA D KQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
A0A6J1KWU0 uncharacterized protein LOC1114983073.1e-3595.24Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
        MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEY KPQRVPPACPYRPAAKQN NEEL+PLAGQQHPPPKAVDA DAKQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G03460.1 unknown protein1.3e-1455.17Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNS
        MVC+ CL+PLFL+P++N +P +    M K+Y   GWEYRKP RVPPACP++P AK ++
Subjt:  MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGCTTGGCGTGTTTATTGCCTCTGTTTCTCATTCCAGTCGTCAACGCGCTGCCTGTTCTATTCCACTTGATTATGGGCAAAATTTATAGAATTTTTGGCTGGGA
ATATAGAAAACCACAGAGGGTACCTCCAGCTTGTCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGAGGAGTTACAACCTCTAGCTGGTCAGCAGCACCCACCTCCAA
AAGCCGTTGATGCGGAGGATGCAAAGCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
TAATTCAGATTCATCAAAGGGTCCGCCAGTGCGTCCCAGTTGCGATCGTCTTCTTCAATTTGTTGCCGAATCGGTTCGAAAATGGTTTGCTTGGCGTGTTTATTGCCTCT
GTTTCTCATTCCAGTCGTCAACGCGCTGCCTGTTCTATTCCACTTGATTATGGGCAAAATTTATAGAATTTTTGGCTGGGAATATAGAAAACCACAGAGGGTACCTCCAG
CTTGTCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGAGGAGTTACAACCTCTAGCTGGTCAGCAGCACCCACCTCCAAAAGCCGTTGATGCGGAGGATGCAAAGCAA
GACTGAATTTGGAGACTTCTGTCGTACATACATGTCAACAAGACCAGCAGATCTCTGTGGCCCTGAAAGCAGTGGACGCTGTCGATGTCAATTAAAGGAAGCTATGACTT
CAATCGGTCAGATAAAAGAATATCTTAAACTCTCATCACTAATACCCATCAATACAGTTCATTTTGTCAGTGCATACTTTCTGAATAATTTAGCTGGATGGCTGGAATAT
GTTTCCTGGTTTGTAGTTAATCAATGCTTGTGGAATCTCTGGTAAGAAACAGATGAAATTGGCGTAGACAATGGTTTAATTCACTGCTGCCTTAACTTTTTTGTTCCCAA
AAGAACTTTTAACTTCCTTGTCTGCCTTACGTTGTGAAGTTCTTGGAGCAAGCTTACTAAGATTGTGTTGCCTCT
Protein sequenceShow/hide protein sequence
MVCLACLLPLFLIPVVNALPVLFHLIMGKIYRIFGWEYRKPQRVPPACPYRPAAKQNSNEELQPLAGQQHPPPKAVDAEDAKQD