CuGenDBv2

Gene ID	CmoCh06G003940
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Genome location	Cmo_Chr06:1924368..1927556
RNA-Seq Expression	CmoCh06G003940
Synteny	CmoCh06G003940
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7028039.1 hypothetical protein SDJN02_09219, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-61

96.83

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAIS   HPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGR+LKLLGKFMDDAVNLMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

XP_004137845.1 uncharacterized protein LOC101222625 [Cucumis sativus]

2.0e-56

86.51

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MSKKG  G  P+ KDAPWRA+GKP PKI+HAP+LRI+QSPFSNYA+SVMKHPDPIGSGLA DAILE+AGPDCIVPGQ+APVKLLGLKVWPIDVDLKFLEP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGR+LKLLGKFMDDAV+LMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

XP_022937008.1 uncharacterized protein LOC111443428 [Cucurbita moschata]

2.4e-65

100

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGRDLKLLGKFMDDAVNLMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

XP_023005847.1 uncharacterized protein LOC111498726 [Cucurbita maxima]

3.4e-64

98.41

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MSKKGAAGRTPVLKDAPWRAA KPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGR+LKLLGKFMDDAVNLMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

XP_023541001.1 uncharacterized protein LOC111801211 [Cucurbita pepo subsp. pepo]

1.3e-63

97.62

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRI QSPFSNYAISVMK+PDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGR+LKLLGKFMDDAVNLMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B749 uncharacterized protein LOC103486514

7.0e-55

83.33

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MSKKG  G   + KDAPWRA+GKP PKIHHAP+LRI+QSPFS+YA++VMKHPDPIGSGLA DA+LE+AGPDCIVPGQ+APVKLLGLKVWPIDVDLK LEP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGR+LKLLGKFMDDAV+LMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

A0A5A7TQX6 Uncharacterized protein

1.2e-51

80.95

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MSKKG  G   + KDAPWRA+GKP PKIHHAP+LRI+QSPFS+YA++   HPDPIGSGLA DA+LE+AGPDCIVPGQ+APVKLLGLKVWPIDVDLK LEP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGR+LKLLGKFMDDAV+LMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

A0A6J1CSK2 uncharacterized protein LOC111014375

1.4e-55

84.13

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MS+K   G   + KDAPWRA+G+P PKIHHAPVLRI+QSPFSNYA+SVMKHPDPIGSGLA DAILE+AGPDCIVPGQ+APVKLLGLKVWPID+DLKF EP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGR+LKLLGKFMDDAVNLMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

A0A6J1FEU8 uncharacterized protein LOC111443428

1.1e-65

100

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGRDLKLLGKFMDDAVNLMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

A0A6J1KUA5 uncharacterized protein LOC111498726

1.7e-64

98.41

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Query:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
        MSKKGAAGRTPVLKDAPWRAA KPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP
Subjt:  MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEP

Query:  VGRDLKLLGKFMDDAVNLMNKSFIDR
        VGR+LKLLGKFMDDAVNLMNKSFIDR
Subjt:  VGRDLKLLGKFMDDAVNLMNKSFIDR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G36835.1 unknown protein

2.0e-46

66.14

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Query:  MSKKGAAGRTPVLKDAPWR-AAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLE
        M+KKG A    + +DAPWR ++G+P PKI  +PVL I+Q+P ++YAISVMKHP+P+G G AM+A+LESAGP+C+VPGQ  P++LLG+KVWP++VDLKFLE
Subjt:  MSKKGAAGRTPVLKDAPWR-AAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLE

Query:  PVGRDLKLLGKFMDDAVNLMNKSFIDR
        PVG++LK+LGKFMD+AV LMNKSFIDR
Subjt:  PVGRDLKLLGKFMDDAVNLMNKSFIDR

Sequences

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CDS sequence

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ATGTCTAAGAAAGGGGCCGCCGGTAGAACACCGGTTTTAAAGGACGCCCCATGGAGGGCTGCTGGCAAACCCACTCCGAAAATCCACCATGCTCCTGTGCTCCGCATTGC
CCAATCCCCCTTTTCCAATTACGCTATCTCTGTAATGAAGCATCCTGATCCGATTGGAAGTGGGTTAGCTATGGATGCTATCTTGGAATCGGCTGGGCCGGATTGTATTG
TGCCTGGACAGACTGCACCTGTCAAATTACTTGGTCTCAAGGTTTGGCCCATTGATGTCGATCTTAAGTTTCTCGAGCCCGTTGGTAGAGACCTTAAATTACTTGGAAAG
TTTATGGATGATGCGGTGAACCTGATGAACAAGTCATTTATAGATCGGTAG

mRNA sequence

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AAAAAGCTGAAAACAAAAATGGGCAATTTGCAAATTGCCCCTTTATTTTCCTGGTATTTAATTTTCATCCGCCTAGGGGTTTGGTGATGAATTTTGGCGGCGACCTTCGC
ATCTATGGATATACCTATCCATCACAAGGGGGGTTTAAGGCTCACAAACGCGGCTGATACTTTCTAATCATCCTTTGCCTTCCTCTTCGTCTTCTCTGCACTCCATCCAT
TTCTTCTCGATTATCCGCGTCTTTTTTCTTTCACCCATCTCAGCCCCATCCAGATTTTTGAGCTCTAGAAGAATCCCATCAGCTCCGGCGAGGAAATTATGTCTAAGAAA
GGGGCCGCCGGTAGAACACCGGTTTTAAAGGACGCCCCATGGAGGGCTGCTGGCAAACCCACTCCGAAAATCCACCATGCTCCTGTGCTCCGCATTGCCCAATCCCCCTT
TTCCAATTACGCTATCTCTGTAATGAAGCATCCTGATCCGATTGGAAGTGGGTTAGCTATGGATGCTATCTTGGAATCGGCTGGGCCGGATTGTATTGTGCCTGGACAGA
CTGCACCTGTCAAATTACTTGGTCTCAAGGTTTGGCCCATTGATGTCGATCTTAAGTTTCTCGAGCCCGTTGGTAGAGACCTTAAATTACTTGGAAAGTTTATGGATGAT
GCGGTGAACCTGATGAACAAGTCATTTATAGATCGGTAG

Protein sequence

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MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEPVGRDLKLLGK
FMDDAVNLMNKSFIDR

CmoCh06G003940 (gene) of Cucurbita moschata (Rifu) v1 genome