; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G004480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G004480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPhytosulfokine-beta
Genome locationCmo_Chr06:2143052..2143565
RNA-Seq ExpressionCmoCh06G004480
SyntenyCmoCh06G004480
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0008283 - cell population proliferation (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596546.1 hypothetical protein SDJN03_09726, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3694.05Show/hide
Query:  MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP
        MNQSSHG FFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQ IR  EEDEEWEK RMMLEAHLDYVYTQNEKP
Subjt:  MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP

KAG7028081.1 hypothetical protein SDJN02_09261 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3694.05Show/hide
Query:  MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP
        MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQ IR  EEDEEWEK RMMLEAHLDYVYTQN+KP
Subjt:  MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP

XP_022942814.1 putative phytosulfokines 6 [Cucurbita moschata]1.0e-40100Show/hide
Query:  MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP
        MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP
Subjt:  MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP

XP_023005727.1 putative phytosulfokines 6 [Cucurbita maxima]4.5e-3691.11Show/hide
Query:  MNQSSHGL-----FFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIR-EEEEDEEWEKRRMMLEAHLDYVYTQNEKP
        MNQSSHG      FFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQ DSWPDFPQIIR EEEEDEEWEKRRMMLEAHLDYVYTQNEKP
Subjt:  MNQSSHGL-----FFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIR-EEEEDEEWEKRRMMLEAHLDYVYTQNEKP

XP_038906014.1 uncharacterized protein LOC120091917 [Benincasa hispida]5.1e-2458.88Show/hide
Query:  MNQSSHGLFFIF---------LLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQII--------------REEEEDEEWEKRRMMLEAHLDYV
        MNQ+SHG FF F         L  S SA+ARF  +KQG EETH K+SHGM+Q DSWPDFP I+               EEEE+EEWEK +MMLEAHLDYV
Subjt:  MNQSSHGLFFIF---------LLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQII--------------REEEEDEEWEKRRMMLEAHLDYV

Query:  YTQNEKP
        YTQNEKP
Subjt:  YTQNEKP

TrEMBL top hitse value%identityAlignment
A0A1S4DUI1 Phytosulfokine-beta4.5e-1855.34Show/hide
Query:  NQSSHGLFFIF--------------LLLSQSATARFLPTKQGFEETHNKLSHG-MIQP-DSWPDFPQIIR----EEEEDEEWEKRRMMLEAHLDYVYTQN
        N++SHG FF F              L  S SA+ARF P+K G EETH K+S+G M+Q  DSWPDFP + R    EE E+EE EKR+MMLEAHLDYVYTQ+
Subjt:  NQSSHGLFFIF--------------LLLSQSATARFLPTKQGFEETHNKLSHG-MIQP-DSWPDFPQIIR----EEEEDEEWEKRRMMLEAHLDYVYTQN

Query:  EKP
        E P
Subjt:  EKP

A0A6J1F9T2 Phytosulfokine-beta7.2e-2466.32Show/hide
Query:  MNQSSHGLF--------FIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQII----REEEEDEEWEKRRMMLEAHLDYVYTQNEK
        MNQSSHG F        FIFLL SQSA+ARF   KQG  ETH KL+HG +Q DSWPDFP II    + EEE+E WEKR+MMLEAHLDYVYTQN K
Subjt:  MNQSSHGLF--------FIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQII----REEEEDEEWEKRRMMLEAHLDYVYTQNEK

A0A6J1FSF0 Phytosulfokine-beta5.0e-41100Show/hide
Query:  MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP
        MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP
Subjt:  MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP

A0A6J1IYI6 Phytosulfokine-beta2.7e-2365.26Show/hide
Query:  MNQSSHGLF-------FIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQII-----REEEEDEEWEKRRMMLEAHLDYVYTQNEK
        MNQSSHG F       FIFLL SQS +ARF   KQG  ETH KL+HG++Q DSW DFP II      EEEE+E WEKR+MMLEAHLDYVYTQN K
Subjt:  MNQSSHGLF-------FIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQII-----REEEEDEEWEKRRMMLEAHLDYVYTQNEK

A0A6J1KTY7 Phytosulfokine-beta2.2e-3691.11Show/hide
Query:  MNQSSHGL-----FFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIR-EEEEDEEWEKRRMMLEAHLDYVYTQNEKP
        MNQSSHG      FFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQ DSWPDFPQIIR EEEEDEEWEKRRMMLEAHLDYVYTQNEKP
Subjt:  MNQSSHGL-----FFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIR-EEEEDEEWEKRRMMLEAHLDYVYTQNEKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G44735.1 PHYTOSULFOKINE 3 PRECURSOR8.2e-0436.84Show/hide
Query:  LFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEK
        L  +FL+LS S++A  +   +  +E +  +S   ++ DS      +    E DEE  +RRMM E+HLDY+YTQ+ K
Subjt:  LFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEK

AT3G44735.2 PHYTOSULFOKINE 3 PRECURSOR8.2e-0436.84Show/hide
Query:  LFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEK
        L  +FL+LS S++A  +   +  +E +  +S   ++ DS      +    E DEE  +RRMM E+HLDY+YTQ+ K
Subjt:  LFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAGAGCTCCCATGGCTTGTTCTTCATTTTCCTCCTCCTCTCCCAATCAGCCACTGCACGTTTCCTACCAACCAAACAAGGTTTTGAAGAAACCCACAACAAGCT
CAGCCATGGAATGATCCAACCAGATTCATGGCCAGATTTCCCCCAAATCATAAGAGAAGAAGAAGAAGATGAAGAATGGGAGAAGAGAAGGATGATGTTAGAAGCACACT
TGGATTATGTTTATACACAAAATGAGAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGACTTGAAAAAGGCAACATAGACACAATCTCTCCCTCTCTCTCTCTTTGCTTTCCTTCTTCTTCTTCTTCTTCTTCGTCAAAACACTAAAGAAAATGAACCAGAGC
TCCCATGGCTTGTTCTTCATTTTCCTCCTCCTCTCCCAATCAGCCACTGCACGTTTCCTACCAACCAAACAAGGTTTTGAAGAAACCCACAACAAGCTCAGCCATGGAAT
GATCCAACCAGATTCATGGCCAGATTTCCCCCAAATCATAAGAGAAGAAGAAGAAGATGAAGAATGGGAGAAGAGAAGGATGATGTTAGAAGCACACTTGGATTATGTTT
ATACACAAAATGAGAAGCCTTGA
Protein sequenceShow/hide protein sequence
MNQSSHGLFFIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQIIREEEEDEEWEKRRMMLEAHLDYVYTQNEKP