; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G004550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G004550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCmo_Chr06:2170667..2175838
RNA-Seq ExpressionCmoCh06G004550
SyntenyCmoCh06G004550
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain
IPR029472 - Retrotransposon Copia-like, N-terminal
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1840611.1 unnamed protein product [Ananas comosus var. bracteatus]3.7e-12234.04Show/hide
Query:  SFKISDVDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHA
        S K  ++D + PYY+HHSDQPG+ LVP+KLNGANYQSW K+++HAL AK K+GFIDG+++ PSQ+   TEF LWNQCNS+I+SWLTHSVE D+A+G+IHA
Subjt:  SFKISDVDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHA

Query:  KTAHQVWVDLHD-QFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFT--------------------------------------
        KTA+QVW DL D QFSQKNA AIFQIQ SIAT+SQG+M++++Y+ KLKALWDELE YR P+T                                      
Subjt:  KTAHQVWVDLHD-QFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFT--------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------SKSSFKISDV---------DLTHPYYIHHSDQPGYSLV----------------PIKLNGA-
                                                SS   +D+          ++ P+    S  P ++                  P+ +N   
Subjt:  --------------------------------------SKSSFKISDV---------DLTHPYYIHHSDQPGYSLV----------------PIKLNGA-

Query:  ---------------------NYQSWRKSV------------------------------------------MHALIAKKKIGFIDGTIEEPSQDANSTE
                             N+Q+ R+S                                             +L  +  +  I   I EP+  + + +
Subjt:  ---------------------NYQSWRKSV------------------------------------------MHALIAKKKIGFIDGTIEEPSQDANSTE

Query:  FELWN-------QCNSMIISWLTHSVEA---------------------DIAKGIIHAKTAHQV-WVDLHDQFSQKNALAIFQIQNSIATMSQG-TMALS
        F  W        Q      +W   S+ A                     +  K  + AK   Q+  +D  + FS    L   +   +IA      T+ L 
Subjt:  FELWN-------QCNSMIISWLTHSVEA---------------------DIAKGIIHAKTAHQV-WVDLHDQFSQKNALAIFQIQNSIATMSQG-TMALS

Query:  TYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQAYSLLVQEE---------MQRQDLTTG---KMIG
             L     E+  Y  P                     L   ++++ +V S  L  +     +  YSL  +++              L TG   + I 
Subjt:  TYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQAYSLLVQEE---------MQRQDLTTG---KMIG

Query:  SGKQF----------GGLYHISSSPIKSSAHQVSQSSDLWHLRL----GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYS
        + KQF          G L +        S   +  S   + L +    G TG+RP+ FPMEQN+KL+LT+GEKL+DP +YRRLI RLIYLTVTRPDI YS
Subjt:  SGKQF----------GGLYHISSSPIKSSAHQVSQSSDLWHLRL----GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYS

Query:  VRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTC
        VR LSQ+MHEPRKPHWEAA+RVL+YIK TPGQGLLLP E NL+L A+CDS+W GCRT+RRSISG+CIFLG+S+ISWKSKKQTNVSRSSAE EYR+MANTC
Subjt:  VRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTC

Query:  LELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD
        LELTW+ Y+L DL V  + PA L+CDNQAALH+AANPVFHER  + E D
Subjt:  LELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD

GAU33010.1 hypothetical protein TSUD_358770 [Trifolium subterraneum]2.4e-12644.3Show/hide
Query:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D T+PYYIH SD PG+ LVP KLN  NY SW  S++HAL AK KIGFI+G+I+ PS+   S E+ LWNQCN+MI+SWLTHSVE+D+AKG+IHAKTAHQV
Subjt:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ
        W D  DQFSQKNA AI++IQ S+A++SQGTMA STYFTK+K LWDELE YRT  TC                  LMGLN +Y TVR+NILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQ--------------------------------------------------------------------------DLTTGKMIGSGKQ
        AYSL++Q++ QRQ                                                                             + K I S ++
Subjt:  AYSLLVQEEMQRQ--------------------------------------------------------------------------DLTTGKMIGSGKQ

Query:  FG----------------------------------GLYHISSSPIKSSAHQVSQSSDL---------------WHLRLGLT--------GARPDKFPME
         G                                   L+ +SS+    +++  + ++ L               W L  G T              FP  
Subjt:  FG----------------------------------GLYHISSSPIKSSAHQVSQSSDL---------------WHLRLGLT--------GARPDKFPME

Query:  QNLKLSLTEGEKLNDPSKYRRLIGR--------LIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWG
         ++ L +     +        L GR        ++++T        + +   QFMHEPRKPHW+AALRVLRYIKGTPGQGLL  S N+L L+A+CDSDWG
Subjt:  QNLKLSLTEGEKLNDPSKYRRLIGR--------LIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWG

Query:  GCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD
        GC  +RRS++GFC+FLGNSI+ WKSKKQ  VSRSSAE+EYR MANTCLELTW+R+ILQDL VP   P  L+CDNQ  LHIAANPVFHER  + E D
Subjt:  GCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD

RVW69506.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.2e-12533.84Show/hide
Query:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSDQPG+ LVPIKLNG NYQSW K+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH+VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTM ++ YFTK+KALWDELE YR+P TC                  LMGLN+SYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQ------------------------------------------------------------------DLTTGKM-----IGSGKQ---
        AYSL+VQEEMQRQ                                                                  +  TG+       G G Q   
Subjt:  AYSLLVQEEMQRQ------------------------------------------------------------------DLTTGKM-----IGSGKQ---

Query:  -------------------------------------------------FGGLYHISS------------------------------------------
                                                          G   HI S                                          
Subjt:  -------------------------------------------------FGGLYHISS------------------------------------------

Query:  ------------------------------------------------------SPIKSSA---------------------------------------
                                                              SP+ SS                                        
Subjt:  ------------------------------------------------------SPIKSSA---------------------------------------

Query:  -------------HQVSQSSD-----------------LWHLRL--------------------------------------------------------
                     H  +QSS                   WH  +                                                        
Subjt:  -------------HQVSQSSD-----------------LWHLRL--------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------------GLTGARPDKFPMEQNLK
                                                                                           GLTG +P+KFPMEQNLK
Subjt:  -----------------------------------------------------------------------------------GLTGARPDKFPMEQNLK

Query:  LSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGF
        L+  +GE L+DPS+YRRL+GRLIYLTVTRPDI YSVR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+CDS+WGGCR SRRS+S +
Subjt:  LSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGF

Query:  CIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD
        C+FLG+S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYIL+DL V L +PA L+CDNQAAL+IAANPVFHER  + E D
Subjt:  CIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD

RVX09068.1 Geraniol 8-hydroxylase [Vitis vinifera]2.7e-12535.74Show/hide
Query:  LVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQ
        LVPIKLNG NYQSW K+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH+VE+DIA+GIIHAKTA +VWVDL DQFSQKNA A+FQ
Subjt:  LVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQ

Query:  IQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQAYSLLVQEEMQRQ-----
        IQ SIATMSQGTM ++ YFTK+KALWDELE YR+P TC                  LMGLN+SYK VRSNILMMSPLPNVRQAYSL+VQEEMQRQ     
Subjt:  IQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQAYSLLVQEEMQRQ-----

Query:  -------------------------------------------------------------DLTTGKM-----IGSGKQ---------------------
                                                                     +  TG+       G G Q                     
Subjt:  -------------------------------------------------------------DLTTGKM-----IGSGKQ---------------------

Query:  -------------------------------FGGLYHISS------------------------------------------------------------
                                        G   HI S                                                            
Subjt:  -------------------------------FGGLYHISS------------------------------------------------------------

Query:  ------------------------------------SPIKSSAHQVSQSS--------------------------------------------------
                                            SP+ SS    S SS                                                  
Subjt:  ------------------------------------SPIKSSAHQVSQSS--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------DLWHLRL-----------------------------------------------
                                                      DL  +++                                               
Subjt:  ----------------------------------------------DLWHLRL-----------------------------------------------

Query:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC
        GLTG +P+KFPMEQNLKL+  +GE L+DPS+YRRL+GRLIYLTVTRPDI YSVR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+C
Subjt:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC

Query:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGED
        DSDWGGCR SRRS+SG+C+FLG+S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYIL+DL V L +PA L+CDNQAAL+IAANPVFHER  + E 
Subjt:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGED

Query:  D
        D
Subjt:  D

RVX15598.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.7e-13237.3Show/hide
Query:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSDQPG+ LVPIKLNG NYQSW K+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTM ++ YFTK+KALWDELE YR+P TC                  LMGL++SYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQ------------------------------------------------------------------DLTTGKM-----IGSGKQ---
        AYSL+VQEEMQRQ                                                                  +  TG+       G G Q   
Subjt:  AYSLLVQEEMQRQ------------------------------------------------------------------DLTTGKM-----IGSGKQ---

Query:  -------------------------------FGGLYHISSSPIKSSA-------HQVSQSS---DL----------------------------------
                                          L H +S  I + A       H +S  S   DL                                  
Subjt:  -------------------------------FGGLYHISSSPIKSSA-------HQVSQSS---DL----------------------------------

Query:  -----------------------------------WH---------------------------------------------------------------
                                           WH                                                               
Subjt:  -----------------------------------WH---------------------------------------------------------------

Query:  ---------------------------------------------------LRLGLT-------------------------------------------
                                                           LR  LT                                           
Subjt:  ---------------------------------------------------LRLGLT-------------------------------------------

Query:  ------------------------------------------------------------------------------------GARPDKFPMEQNLKLS
                                                                                            G +P+KFPMEQNLKL+
Subjt:  ------------------------------------------------------------------------------------GARPDKFPMEQNLKLS

Query:  LTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFCI
          +GE L+DPS+YRRL+GRLIYLT+TR DI YSVR LSQFM+ P+KPHWEAALRVLRYIKG+PGQGL LPSENNL L A+CDSDWGGCR SRRS+SG+C+
Subjt:  LTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFCI

Query:  FLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD
        FL +S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYIL+DL V L +PA L+CDNQAAL+IAANPVFHER  + E D
Subjt:  FLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD

TrEMBL top hitse value%identityAlignment
A0A2Z6N9V1 Uncharacterized protein1.2e-12644.3Show/hide
Query:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D T+PYYIH SD PG+ LVP KLN  NY SW  S++HAL AK KIGFI+G+I+ PS+   S E+ LWNQCN+MI+SWLTHSVE+D+AKG+IHAKTAHQV
Subjt:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ
        W D  DQFSQKNA AI++IQ S+A++SQGTMA STYFTK+K LWDELE YRT  TC                  LMGLN +Y TVR+NILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQ--------------------------------------------------------------------------DLTTGKMIGSGKQ
        AYSL++Q++ QRQ                                                                             + K I S ++
Subjt:  AYSLLVQEEMQRQ--------------------------------------------------------------------------DLTTGKMIGSGKQ

Query:  FG----------------------------------GLYHISSSPIKSSAHQVSQSSDL---------------WHLRLGLT--------GARPDKFPME
         G                                   L+ +SS+    +++  + ++ L               W L  G T              FP  
Subjt:  FG----------------------------------GLYHISSSPIKSSAHQVSQSSDL---------------WHLRLGLT--------GARPDKFPME

Query:  QNLKLSLTEGEKLNDPSKYRRLIGR--------LIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWG
         ++ L +     +        L GR        ++++T        + +   QFMHEPRKPHW+AALRVLRYIKGTPGQGLL  S N+L L+A+CDSDWG
Subjt:  QNLKLSLTEGEKLNDPSKYRRLIGR--------LIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWG

Query:  GCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD
        GC  +RRS++GFC+FLGNSI+ WKSKKQ  VSRSSAE+EYR MANTCLELTW+R+ILQDL VP   P  L+CDNQ  LHIAANPVFHER  + E D
Subjt:  GCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD

A0A438GBE7 Retrovirus-related Pol polyprotein from transposon RE15.9e-12633.84Show/hide
Query:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSDQPG+ LVPIKLNG NYQSW K+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH+VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTM ++ YFTK+KALWDELE YR+P TC                  LMGLN+SYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQ------------------------------------------------------------------DLTTGKM-----IGSGKQ---
        AYSL+VQEEMQRQ                                                                  +  TG+       G G Q   
Subjt:  AYSLLVQEEMQRQ------------------------------------------------------------------DLTTGKM-----IGSGKQ---

Query:  -------------------------------------------------FGGLYHISS------------------------------------------
                                                          G   HI S                                          
Subjt:  -------------------------------------------------FGGLYHISS------------------------------------------

Query:  ------------------------------------------------------SPIKSSA---------------------------------------
                                                              SP+ SS                                        
Subjt:  ------------------------------------------------------SPIKSSA---------------------------------------

Query:  -------------HQVSQSSD-----------------LWHLRL--------------------------------------------------------
                     H  +QSS                   WH  +                                                        
Subjt:  -------------HQVSQSSD-----------------LWHLRL--------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------------GLTGARPDKFPMEQNLK
                                                                                           GLTG +P+KFPMEQNLK
Subjt:  -----------------------------------------------------------------------------------GLTGARPDKFPMEQNLK

Query:  LSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGF
        L+  +GE L+DPS+YRRL+GRLIYLTVTRPDI YSVR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+CDS+WGGCR SRRS+S +
Subjt:  LSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGF

Query:  CIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD
        C+FLG+S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYIL+DL V L +PA L+CDNQAAL+IAANPVFHER  + E D
Subjt:  CIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD

A0A438JJE0 Geraniol 8-hydroxylase1.3e-12535.74Show/hide
Query:  LVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQ
        LVPIKLNG NYQSW K+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH+VE+DIA+GIIHAKTA +VWVDL DQFSQKNA A+FQ
Subjt:  LVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQ

Query:  IQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQAYSLLVQEEMQRQ-----
        IQ SIATMSQGTM ++ YFTK+KALWDELE YR+P TC                  LMGLN+SYK VRSNILMMSPLPNVRQAYSL+VQEEMQRQ     
Subjt:  IQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQAYSLLVQEEMQRQ-----

Query:  -------------------------------------------------------------DLTTGKM-----IGSGKQ---------------------
                                                                     +  TG+       G G Q                     
Subjt:  -------------------------------------------------------------DLTTGKM-----IGSGKQ---------------------

Query:  -------------------------------FGGLYHISS------------------------------------------------------------
                                        G   HI S                                                            
Subjt:  -------------------------------FGGLYHISS------------------------------------------------------------

Query:  ------------------------------------SPIKSSAHQVSQSS--------------------------------------------------
                                            SP+ SS    S SS                                                  
Subjt:  ------------------------------------SPIKSSAHQVSQSS--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------DLWHLRL-----------------------------------------------
                                                      DL  +++                                               
Subjt:  ----------------------------------------------DLWHLRL-----------------------------------------------

Query:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC
        GLTG +P+KFPMEQNLKL+  +GE L+DPS+YRRL+GRLIYLTVTRPDI YSVR LSQFM+ PRKPHWEAALRVLRYIKG+PGQGL LPSENNL L A+C
Subjt:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC

Query:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGED
        DSDWGGCR SRRS+SG+C+FLG+S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYIL+DL V L +PA L+CDNQAAL+IAANPVFHER  + E 
Subjt:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGED

Query:  D
        D
Subjt:  D

A0A438K345 Retrovirus-related Pol polyprotein from transposon RE18.5e-13337.3Show/hide
Query:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV
        +D +HP YIHHSDQPG+ LVPIKLNG NYQSW K+V+HAL AKKKIGF+DGT+EEPSQ+     FE WNQCNSMI+SWLTH VE+DIA+GIIHAKTA +V
Subjt:  VDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQV

Query:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ
        WVDL DQFSQKNA A+FQIQ SIATMSQGTM ++ YFTK+KALWDELE YR+P TC                  LMGL++SYK VRSNILMMSPLPNVRQ
Subjt:  WVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQ

Query:  AYSLLVQEEMQRQ------------------------------------------------------------------DLTTGKM-----IGSGKQ---
        AYSL+VQEEMQRQ                                                                  +  TG+       G G Q   
Subjt:  AYSLLVQEEMQRQ------------------------------------------------------------------DLTTGKM-----IGSGKQ---

Query:  -------------------------------FGGLYHISSSPIKSSA-------HQVSQSS---DL----------------------------------
                                          L H +S  I + A       H +S  S   DL                                  
Subjt:  -------------------------------FGGLYHISSSPIKSSA-------HQVSQSS---DL----------------------------------

Query:  -----------------------------------WH---------------------------------------------------------------
                                           WH                                                               
Subjt:  -----------------------------------WH---------------------------------------------------------------

Query:  ---------------------------------------------------LRLGLT-------------------------------------------
                                                           LR  LT                                           
Subjt:  ---------------------------------------------------LRLGLT-------------------------------------------

Query:  ------------------------------------------------------------------------------------GARPDKFPMEQNLKLS
                                                                                            G +P+KFPMEQNLKL+
Subjt:  ------------------------------------------------------------------------------------GARPDKFPMEQNLKLS

Query:  LTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFCI
          +GE L+DPS+YRRL+GRLIYLT+TR DI YSVR LSQFM+ P+KPHWEAALRVLRYIKG+PGQGL LPSENNL L A+CDSDWGGCR SRRS+SG+C+
Subjt:  LTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFCI

Query:  FLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD
        FL +S+ISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYIL+DL V L +PA L+CDNQAAL+IAANPVFHER  + E D
Subjt:  FLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD

A0A6V7QCA8 Uncharacterized protein1.8e-12234.04Show/hide
Query:  SFKISDVDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHA
        S K  ++D + PYY+HHSDQPG+ LVP+KLNGANYQSW K+++HAL AK K+GFIDG+++ PSQ+   TEF LWNQCNS+I+SWLTHSVE D+A+G+IHA
Subjt:  SFKISDVDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHA

Query:  KTAHQVWVDLHD-QFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFT--------------------------------------
        KTA+QVW DL D QFSQKNA AIFQIQ SIAT+SQG+M++++Y+ KLKALWDELE YR P+T                                      
Subjt:  KTAHQVWVDLHD-QFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFT--------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------SKSSFKISDV---------DLTHPYYIHHSDQPGYSLV----------------PIKLNGA-
                                                SS   +D+          ++ P+    S  P ++                  P+ +N   
Subjt:  --------------------------------------SKSSFKISDV---------DLTHPYYIHHSDQPGYSLV----------------PIKLNGA-

Query:  ---------------------NYQSWRKSV------------------------------------------MHALIAKKKIGFIDGTIEEPSQDANSTE
                             N+Q+ R+S                                             +L  +  +  I   I EP+  + + +
Subjt:  ---------------------NYQSWRKSV------------------------------------------MHALIAKKKIGFIDGTIEEPSQDANSTE

Query:  FELWN-------QCNSMIISWLTHSVEA---------------------DIAKGIIHAKTAHQV-WVDLHDQFSQKNALAIFQIQNSIATMSQG-TMALS
        F  W        Q      +W   S+ A                     +  K  + AK   Q+  +D  + FS    L   +   +IA      T+ L 
Subjt:  FELWN-------QCNSMIISWLTHSVEA---------------------DIAKGIIHAKTAHQV-WVDLHDQFSQKNALAIFQIQNSIATMSQG-TMALS

Query:  TYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQAYSLLVQEE---------MQRQDLTTG---KMIG
             L     E+  Y  P                     L   ++++ +V S  L  +     +  YSL  +++              L TG   + I 
Subjt:  TYFTKLKALWDELEAYRTPFTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQAYSLLVQEE---------MQRQDLTTG---KMIG

Query:  SGKQF----------GGLYHISSSPIKSSAHQVSQSSDLWHLRL----GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYS
        + KQF          G L +        S   +  S   + L +    G TG+RP+ FPMEQN+KL+LT+GEKL+DP +YRRLI RLIYLTVTRPDI YS
Subjt:  SGKQF----------GGLYHISSSPIKSSAHQVSQSSDLWHLRL----GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYS

Query:  VRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTC
        VR LSQ+MHEPRKPHWEAA+RVL+YIK TPGQGLLLP E NL+L A+CDS+W GCRT+RRSISG+CIFLG+S+ISWKSKKQTNVSRSSAE EYR+MANTC
Subjt:  VRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTC

Query:  LELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD
        LELTW+ Y+L DL V  + PA L+CDNQAALH+AANPVFHER  + E D
Subjt:  LELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDD

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.9e-2637.37Show/hide
Query:  PMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTV-TRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLL----LPSENNLRLQAYCDSDWG
        P + N +L L   E  N P   R LIG L+Y+ + TRPD+  +V +LS++  +     W+   RVLRY+KGT    L+    L  EN  ++  Y DSDW 
Subjt:  PMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTV-TRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLL----LPSENNLRLQAYCDSDWG

Query:  GCRTSRRSISGFCIFLGN-SIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHER
        G    R+S +G+   + + ++I W +K+Q +V+ SS EAEY A+     E  WL+++L  +N+ L  P  +Y DNQ  + IA NP  H+R
Subjt:  GCRTSRRSISGFCIFLGN-SIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHER

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.9e-2936.95Show/hide
Query:  RLGLTGARPDKFPMEQNLKLSL----TEGEKLNDPSK--YRRLIGRLIYLTV-TRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSE
        R  +  A+P   P+  +LKLS     T  E+  + +K  Y   +G L+Y  V TRPDIA++V ++S+F+  P K HWEA   +LRY++GT G  L     
Subjt:  RLGLTGARPDKFPMEQNLKLSL----TEGEKLNDPSK--YRRLIGRLIYLTV-TRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSE

Query:  NNLRLQAYCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVF
        + + L+ Y D+D  G   +R+S +G+        ISW+SK Q  V+ S+ EAEY A   T  E+ WL+  LQ+L +   E  ++YCD+Q+A+ ++ N ++
Subjt:  NNLRLQAYCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVF

Query:  HER
        H R
Subjt:  HER

P92519 Uncharacterized mitochondrial protein AtMg008101.5e-3849.68Show/hide
Query:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC
        G+   +P   P+   L  S++   K  DPS +R ++G L YLT+TRPDI+Y+V ++ Q MHEP    ++   RVLRY+KGT   GL +   + L +QA+C
Subjt:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC

Query:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTW
        DSDW GC ++RRS +GFC FLG +IISW +K+Q  VSRSS E EYRA+A T  ELTW
Subjt:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.0e-5147.74Show/hide
Query:  RLGLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQA
        R  +  A+P   PM  + KLSL  G KL DP++YR ++G L YL  TRPDI+Y+V  LSQFMH P + H +A  R+LRY+ GTP  G+ L   N L L A
Subjt:  RLGLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQA

Query:  YCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDY
        Y D+DW G +    S +G+ ++LG+  ISW SKKQ  V RSS EAEYR++ANT  E+ W+  +L +L + L+ P ++YCDN  A ++ ANPVFH R+ +
Subjt:  YCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDY

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.5e-5148.24Show/hide
Query:  RLGLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQA
        R  +  A+P   PM  + KL+L  G KL DP++YR ++G L YL  TRPD++Y+V  LSQ+MH P   HW A  RVLRY+ GTP  G+ L   N L L A
Subjt:  RLGLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQA

Query:  YCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDY
        Y D+DW G      S +G+ ++LG+  ISW SKKQ  V RSS EAEYR++ANT  EL W+  +L +L + LS P ++YCDN  A ++ ANPVFH R+ +
Subjt:  YCDSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDY

Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2.4e-2336.53Show/hide
Query:  MAESAKSSFKISDVDLTHPYY----IHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSV
        MAE+ KS    SD D   PYY    IHH     +S+  +  +  NY +W+      L   KK GFIDGT+ +P  D  S  ++ W QCN+M++ WL +S+
Subjt:  MAESAKSSFKISDVDLTHPYY----IHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSV

Query:  EADIAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAY
           + + +++A+TAH++W DL   F     L I+Q++  +AT+ QG  ++  YF KL  +W EL  Y
Subjt:  EADIAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAY

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.8e-5550.25Show/hide
Query:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC
        GL G +P   PM+ ++  S   G    D   YRRLIGRL+YL +TR DI+++V  LSQF   PR  H +A +++L YIKGT GQGL   S+  ++LQ + 
Subjt:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC

Query:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGED
        D+ +  C+ +RRS +G+C+FLG S+ISWKSKKQ  VS+SSAEAEYRA++    E+ WL    ++L +PLS+P LL+CDN AA+HIA N VFHER  + E 
Subjt:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGED

Query:  D
        D
Subjt:  D

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.0e-1848.1Show/hide
Query:  IYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFC
        +YLT+TRPD+ ++V  LSQF    R    +A  +VL Y+KGT GQGL   + ++L+L+A+ DSDW  C  +RRS++GFC
Subjt:  IYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGFC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.1e-3949.68Show/hide
Query:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC
        G+   +P   P+   L  S++   K  DPS +R ++G L YLT+TRPDI+Y+V ++ Q MHEP    ++   RVLRY+KGT   GL +   + L +QA+C
Subjt:  GLTGARPDKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYC

Query:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTW
        DSDW GC ++RRS +GFC FLG +IISW +K+Q  VSRSS E EYRA+A T  ELTW
Subjt:  DSDWGGCRTSRRSISGFCIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCAGCCAAATCTAGCTTCAAAATTTCGGATGTTGATTTAACACATCCGTACTATATTCATCACTCTGATCAGCCAGGATATTCACTTGTTCCAATCAAATT
AAATGGAGCAAATTATCAATCCTGGAGGAAATCAGTTATGCATGCTCTTATTGCCAAGAAGAAAATTGGCTTCATTGATGGCACAATTGAGGAACCGTCCCAAGATGCAA
ATTCAACCGAATTCGAACTCTGGAATCAGTGCAACAGTATGATAATATCTTGGTTAACTCATTCCGTTGAAGCAGATATCGCTAAAGGCATTATTCACGCCAAGACAGCT
CATCAAGTGTGGGTTGATCTTCACGATCAATTCTCACAAAAGAATGCTCTAGCAATTTTTCAAATACAAAACTCGATAGCAACGATGTCACAAGGAACCATGGCACTGTC
AACATATTTCACCAAGCTCAAAGCACTCTGGGATGAACTGGAAGCGTACCGCACACCATTTACCTCCAAATCTAGCTTCAAAATTTCGGATGTTGATTTAACACATCCGT
ACTATATTCATCACTCTGATCAGCCAGGATATTCACTTGTTCCAATCAAATTAAATGGAGCAAATTATCAATCCTGGAGGAAATCAGTTATGCATGCTCTTATTGCCAAG
AAGAAAATTGGCTTCATTGATGGCACAATTGAGGAACCGTCCCAAGATGCAAATTCAACCGAATTCGAACTCTGGAATCAGTGCAACAGTATGATAATATCTTGGTTAAC
TCATTCCGTTGAAGCAGATATCGCTAAAGGCATTATTCACGCCAAGACAGCTCATCAAGTGTGGGTTGATCTTCACGATCAATTCTCACAAAAGAATGCTCTAGCAATTT
TTCAAATACAAAACTCGATAGCAACGATGTCACAAGGAACCATGGCACTGTCAACATATTTCACCAAGCTCAAAGCACTCTGGGATGAACTGGAAGCGTACCGCACACCA
TTTACCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCTCATGGGGCTCAATCAGTCTTATAAAACGGTGAGATCTAACATATT
GATGATGTCTCCATTACCTAATGTGAGGCAAGCCTATTCATTACTTGTACAAGAAGAGATGCAGCGTCAGGACTTGACTACGGGGAAGATGATTGGCTCGGGTAAACAAT
TTGGAGGTCTCTATCATATTTCTTCATCTCCAATCAAGTCTTCAGCTCATCAAGTATCTCAGTCATCTGATTTGTGGCATTTACGCCTAGGTCTTACAGGAGCACGTCCA
GACAAATTTCCTATGGAGCAAAATCTGAAACTTTCTTTAACCGAAGGAGAGAAGTTGAATGATCCAAGTAAATACAGACGGTTGATTGGCAGATTAATATATTTGACCGT
CACTAGGCCTGACATAGCTTATTCAGTTCGTATGCTTAGCCAATTTATGCATGAACCAAGAAAACCACATTGGGAGGCAGCTCTTCGAGTTCTGAGGTACATTAAAGGCA
CTCCTGGTCAAGGACTTCTACTGCCATCTGAAAACAATTTAAGATTACAGGCATATTGCGATTCTGACTGGGGTGGTTGTCGAACTTCCAGACGATCTATTTCTGGGTTC
TGCATTTTCCTCGGAAATTCAATTATTTCTTGGAAGTCTAAAAAGCAGACTAATGTGTCCAGATCATCAGCAGAAGCCGAGTATCGAGCTATGGCAAATACTTGTTTAGA
GTTAACTTGGTTAAGATACATTCTTCAAGACTTGAATGTTCCACTGTCCGAACCAGCATTATTATATTGTGATAATCAAGCAGCATTACATATAGCAGCCAATCCAGTTT
TTCATGAACGACTTGACTACGGGGAAGATGATTGGCTCGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAATCAGCCAAATCTAGCTTCAAAATTTCGGATGTTGATTTAACACATCCGTACTATATTCATCACTCTGATCAGCCAGGATATTCACTTGTTCCAATCAAATT
AAATGGAGCAAATTATCAATCCTGGAGGAAATCAGTTATGCATGCTCTTATTGCCAAGAAGAAAATTGGCTTCATTGATGGCACAATTGAGGAACCGTCCCAAGATGCAA
ATTCAACCGAATTCGAACTCTGGAATCAGTGCAACAGTATGATAATATCTTGGTTAACTCATTCCGTTGAAGCAGATATCGCTAAAGGCATTATTCACGCCAAGACAGCT
CATCAAGTGTGGGTTGATCTTCACGATCAATTCTCACAAAAGAATGCTCTAGCAATTTTTCAAATACAAAACTCGATAGCAACGATGTCACAAGGAACCATGGCACTGTC
AACATATTTCACCAAGCTCAAAGCACTCTGGGATGAACTGGAAGCGTACCGCACACCATTTACCTCCAAATCTAGCTTCAAAATTTCGGATGTTGATTTAACACATCCGT
ACTATATTCATCACTCTGATCAGCCAGGATATTCACTTGTTCCAATCAAATTAAATGGAGCAAATTATCAATCCTGGAGGAAATCAGTTATGCATGCTCTTATTGCCAAG
AAGAAAATTGGCTTCATTGATGGCACAATTGAGGAACCGTCCCAAGATGCAAATTCAACCGAATTCGAACTCTGGAATCAGTGCAACAGTATGATAATATCTTGGTTAAC
TCATTCCGTTGAAGCAGATATCGCTAAAGGCATTATTCACGCCAAGACAGCTCATCAAGTGTGGGTTGATCTTCACGATCAATTCTCACAAAAGAATGCTCTAGCAATTT
TTCAAATACAAAACTCGATAGCAACGATGTCACAAGGAACCATGGCACTGTCAACATATTTCACCAAGCTCAAAGCACTCTGGGATGAACTGGAAGCGTACCGCACACCA
TTTACCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCTCATGGGGCTCAATCAGTCTTATAAAACGGTGAGATCTAACATATT
GATGATGTCTCCATTACCTAATGTGAGGCAAGCCTATTCATTACTTGTACAAGAAGAGATGCAGCGTCAGGACTTGACTACGGGGAAGATGATTGGCTCGGGTAAACAAT
TTGGAGGTCTCTATCATATTTCTTCATCTCCAATCAAGTCTTCAGCTCATCAAGTATCTCAGTCATCTGATTTGTGGCATTTACGCCTAGGTCTTACAGGAGCACGTCCA
GACAAATTTCCTATGGAGCAAAATCTGAAACTTTCTTTAACCGAAGGAGAGAAGTTGAATGATCCAAGTAAATACAGACGGTTGATTGGCAGATTAATATATTTGACCGT
CACTAGGCCTGACATAGCTTATTCAGTTCGTATGCTTAGCCAATTTATGCATGAACCAAGAAAACCACATTGGGAGGCAGCTCTTCGAGTTCTGAGGTACATTAAAGGCA
CTCCTGGTCAAGGACTTCTACTGCCATCTGAAAACAATTTAAGATTACAGGCATATTGCGATTCTGACTGGGGTGGTTGTCGAACTTCCAGACGATCTATTTCTGGGTTC
TGCATTTTCCTCGGAAATTCAATTATTTCTTGGAAGTCTAAAAAGCAGACTAATGTGTCCAGATCATCAGCAGAAGCCGAGTATCGAGCTATGGCAAATACTTGTTTAGA
GTTAACTTGGTTAAGATACATTCTTCAAGACTTGAATGTTCCACTGTCCGAACCAGCATTATTATATTGTGATAATCAAGCAGCATTACATATAGCAGCCAATCCAGTTT
TTCATGAACGACTTGACTACGGGGAAGATGATTGGCTCGGGTAA
Protein sequenceShow/hide protein sequence
MAESAKSSFKISDVDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAKKKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTA
HQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTPFTSKSSFKISDVDLTHPYYIHHSDQPGYSLVPIKLNGANYQSWRKSVMHALIAK
KKIGFIDGTIEEPSQDANSTEFELWNQCNSMIISWLTHSVEADIAKGIIHAKTAHQVWVDLHDQFSQKNALAIFQIQNSIATMSQGTMALSTYFTKLKALWDELEAYRTP
FTCXXXXXXXXXXXXXXXXXLLMGLNQSYKTVRSNILMMSPLPNVRQAYSLLVQEEMQRQDLTTGKMIGSGKQFGGLYHISSSPIKSSAHQVSQSSDLWHLRLGLTGARP
DKFPMEQNLKLSLTEGEKLNDPSKYRRLIGRLIYLTVTRPDIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQGLLLPSENNLRLQAYCDSDWGGCRTSRRSISGF
CIFLGNSIISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILQDLNVPLSEPALLYCDNQAALHIAANPVFHERLDYGEDDWLG